[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 189 items for (author: rasmussen & t)

EMDB-54808:
mechanosensitive channel MscS from Francisella tularensis in nanodiscs
Method: single particle / : Rasmussen A, Hemmelmann N, Hove TT, Flegler VJ, Rasmussen T, Bottcher B

EMDB-54810:
mechanosensitive channel MscS from Francisella tularensis, mutant F108A
Method: single particle / : Rasmussen A, Hemmelmann N, Hove TT, Flegler VJ, Rasmussen T, Bottcher B

PDB-9sef:
mechanosensitive channel MscS from Francisella tularensis in nanodiscs
Method: single particle / : Rasmussen A, Hemmelmann N, Hove TT, Flegler VJ, Rasmussen T, Bottcher B

PDB-9seh:
mechanosensitive channel MscS from Francisella tularensis, mutant F108A
Method: single particle / : Rasmussen A, Hemmelmann N, Hove TT, Flegler VJ, Rasmussen T, Bottcher B

EMDB-56958:
pentameric MscL from Escherichia coli in nanodiscs
Method: single particle / : Rasmussen T, Flegler VJ, Bottcher B

PDB-28yc:
pentameric MscL from Escherichia coli in nanodiscs
Method: single particle / : Rasmussen T, Flegler VJ, Bottcher B

EMDB-54783:
mechanosensitive channel MscS from Francisella tularensis, mutant K94A, asymmetric processing
Method: single particle / : Rasmussen A, Hemmelmann N, Hove TT, Flegler VJ, Rasmussen T, Bottcher B

EMDB-54785:
mechanosensitive channel MscS from Francisella tularensis in DDM, asymmetric processing
Method: single particle / : Rasmussen A, Hemmelmann N, Hove TT, Flegler VJ, Rasmussen T, Bottcher B

EMDB-54788:
mechanosensitive channel MscS from Francisella tularensis in DM, asymmetric processing
Method: single particle / : Rasmussen A, Hemmelmann N, Hove TT, Flegler VJ, Rasmussen T, Bottcher B

EMDB-54792:
mechanosensitive channel MscS from Francisella tularensis in DM
Method: single particle / : Rasmussen A, Hemmelmann N, Hove TT, Flegler VJ, Rasmussen T, Bottcher B

EMDB-54806:
mechanosensitive channel MscS from Francisella tularensis in DDM
Method: single particle / : Rasmussen A, Hemmelmann N, Hove TT, Flegler VJ, Rasmussen T, Bottcher B

EMDB-54807:
mechanosensitive channel MscS from Francisella tularensis, mutant K70A
Method: single particle / : Rasmussen A, Hemmelmann N, Hove TT, Flegler VJ, Rasmussen T, Bottcher B

PDB-9sdb:
mechanosensitive channel MscS from Francisella tularensis, mutant K94A, asymmetric processing
Method: single particle / : Rasmussen A, Hemmelmann N, Hove TT, Flegler VJ, Rasmussen T, Bottcher B

PDB-9sdg:
mechanosensitive channel MscS from Francisella tularensis in DDM, asymmetric processing
Method: single particle / : Rasmussen A, Hemmelmann N, Hove TT, Flegler VJ, Rasmussen T, Bottcher B

PDB-9sdo:
mechanosensitive channel MscS from Francisella tularensis in DM, asymmetric processing
Method: single particle / : Rasmussen A, Hemmelmann N, Hove TT, Flegler VJ, Rasmussen T, Bottcher B

PDB-9sdt:
mechanosensitive channel MscS from Francisella tularensis in DM
Method: single particle / : Rasmussen A, Hemmelmann N, Hove TT, Flegler VJ, Rasmussen T, Bottcher B

PDB-9sec:
mechanosensitive channel MscS from Francisella tularensis in DDM
Method: single particle / : Rasmussen A, Hemmelmann N, Hove TT, Flegler VJ, Rasmussen T, Bottcher B

PDB-9sed:
mechanosensitive channel MscS from Francisella tularensis, mutant K70A
Method: single particle / : Rasmussen A, Hemmelmann N, Hove TT, Flegler VJ, Rasmussen T, Bottcher B

EMDB-58096:
Dimer of pentameric MscL from Escherichia coli in nanodiscs
Method: single particle / : Rasmussen T, Flegler VJ, Hove TT, Bottcher B

EMDB-56650:
Sulfate transporter SLC26A11 in nanodiscs with nanobody Nb11, local refinement
Method: single particle / : Hove T, Rasmussen T, Kuhn B, Geertsma ER, Bottcher B

EMDB-56651:
Sulfate transporter SLC26A11 in nanodiscs with nanobody Nb4, local refinement
Method: single particle / : Hove T, Rasmussen T, Kuhn BT, Geertsma ER, Bottcher B

EMDB-52784:
Sulfate transporter SLC26A11 in nanodiscs with nanobody Nb11
Method: single particle / : Rasmussen T, Kuhn BT, Bottcher B, Geertsma ER

EMDB-52785:
Sulfate transporter SLC26A11 in nanodiscs with nanobody Nb4
Method: single particle / : Rasmussen T, Kuhn BT, Bottcher B, Geertsma ER

PDB-9iar:
Sulfate transporter SLC26A11 in nanodiscs with nanobody Nb11
Method: single particle / : Rasmussen T, Kuhn BT, Bottcher B, Geertsma ER

PDB-9ias:
Sulfate transporter SLC26A11 in nanodiscs with nanobody Nb4
Method: single particle / : Rasmussen T, Kuhn BT, Bottcher B, Geertsma ER

EMDB-51820:
Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA
Method: single particle / : Faille A, Warren AJ

EMDB-51899:
Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs, mRNA, and thermospermine
Method: single particle / : Faille A, Warren AJ

EMDB-52095:
Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs, mRNA, and thermospermine
Method: single particle / : Faille A, Warren AJ

EMDB-52299:
Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA
Method: single particle / : Faille A, Warren AJ

PDB-9h3g:
Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA
Method: single particle / : Faille A, Warren AJ

PDB-9h6i:
Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs, mRNA, and thermospermine
Method: single particle / : Faille A, Warren AJ

PDB-9hes:
Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs, mRNA, and thermospermine
Method: single particle / : Faille A, Warren AJ

PDB-9hmw:
Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA
Method: single particle / : Faille A, Warren AJ

EMDB-51418:
NONO/SFPQ filament: local refinment single strand (strand 2)
Method: single particle / : Rasmussen T, Bottcher B

EMDB-51813:
YnaI in its open conformation purified in DDM showing ligand-filled pockets
Method: single particle / : Flegler VJ, Bottcher B, Rasmussen T, Rasmussen A, Hedrich R

EMDB-51817:
a YnaI-MscS chimera in a closed conformation purified in DDM with additional lipids showing ligand-filled pore and pockets
Method: single particle / : Flegler VJ, Bottcher B, Rasmussen T, Rasmussen A, Hedrich R

EMDB-51818:
a YnaI-MscS chimera in an open conformation purified in DDM showing ligand-filled pockets
Method: single particle / : Flegler VJ, Bottcher B, Rasmussen T, Rasmussen A, Hedrich R

EMDB-51897:
YnaI in its open conformation, purified in DDM, C1 processed
Method: single particle / : Flegler VJ, Bottcher B, Rasmussen T, Rasmussen A, Hedrich R

EMDB-51898:
A YnaI-MscS chimera in its closed conformation, C1 processed
Method: single particle / : Flegler VJ, Bottcher B, Rasmussen T, Rasmussen A, Hedrich R

EMDB-51953:
YnaI in closed conformation purified in DDM with additional lipids showing ligand-filled pockets
Method: single particle / : Flegler VJ, Bottcher B, Rasmussen T, Rasmussen A, Hedrich R

EMDB-51954:
A YnaI-MscS chimera in its open conformation, C1 processed
Method: single particle / : Flegler VJ, Bottcher B, Rasmussen T, Rasmussen A, Hedrich R

PDB-9h2p:
YnaI in its open conformation purified in DDM showing ligand-filled pockets
Method: single particle / : Flegler VJ, Bottcher B, Rasmussen T, Rasmussen A, Hedrich R

PDB-9h2s:
a YnaI-MscS chimera in a closed conformation purified in DDM with additional lipids showing ligand-filled pore and pockets
Method: single particle / : Flegler VJ, Bottcher B, Rasmussen T, Rasmussen A, Hedrich R

PDB-9h2v:
a YnaI-MscS chimera in an open conformation purified in DDM showing ligand-filled pockets
Method: single particle / : Flegler VJ, Bottcher B, Rasmussen T, Rasmussen A, Hedrich R

PDB-9h95:
YnaI in closed conformation purified in DDM with additional lipids showing ligand-filled pockets
Method: single particle / : Flegler VJ, Bottcher B, Rasmussen T, Rasmussen A, Hedrich R

EMDB-51471:
NONO/SFPQ filament: composite structure
Method: single particle / : Rasmussen T, Bottcher B

PDB-9gni:
NONO/SFPQ filament: composite structure
Method: single particle / : Rasmussen T, Bottcher B

EMDB-51438:
NONO/SFPQ filament: local refinement central units (strand 1)
Method: single particle / : Rasmussen T, Bottcher B

EMDB-51439:
NONO/SFPQ filament: local refinement central units (strand 2)
Method: single particle / : Rasmussen T, Bottcher B

PDB-9glc:
NONO/SFPQ filament: local refinement central units (strand 1)
Method: single particle / : Rasmussen T, Bottcher B

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more