[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,130 items for (author: park & d)

EMDB-59064:
Cryo-EM structure of Saccharomyces cerevisiae Erv14-Qdr2 complex in detergent
Method: single particle / : Tunyi J, Adams O, Newstead S

EMDB-59065:
Cryo-EM structure of Saccharomyces cerevisiae Erv14-Qdr2 complex in lipid nanodiscs (double Erv14 assembly)
Method: single particle / : Adams O, Parker JL, Newstead S

EMDB-59066:
Cryo-EM structure of Saccharomyces cerevisiae Erv14-Qdr2 complex in lipid nanodiscs (single Erv14 assembly)
Method: single particle / : Adams O, Parker JL, Newstead S

PDB-32qa:
Cryo-EM structure of Saccharomyces cerevisiae Erv14-Qdr2 complex in lipid nanodiscs (double Erv14 assembly)
Method: single particle / : Adams O, Parker JL, Newstead S

PDB-32qb:
Cryo-EM structure of Saccharomyces cerevisiae Erv14-Qdr2 complex in lipid nanodiscs (single Erv14 assembly)
Method: single particle / : Adams O, Parker JL, Newstead S

EMDB-49374:
Human SRCAP-CFDP1-nucleosome complex in the poised state of the H2A.Z histone exchange reaction (composite structure)
Method: single particle / : Louder RK, Park G

EMDB-49375:
Human SRCAP-CFDP1-nucleosome complex in the activated state of the H2A.Z histone exchange reaction (composite structure)
Method: single particle / : Louder RK, Park G

EMDB-49376:
Human SRCAP-CFDP1-hexasome complex in the evicted state of the H2A.Z histone exchange reaction (composite structure)
Method: single particle / : Louder RK, Park G

EMDB-49377:
Human SRCAP-CFDP1-prenucleosome complex in the pre-inserted state of the H2A.Z histone exchange reaction (composite structure)
Method: single particle / : Louder RK, Park G

EMDB-49378:
Human SRCAP-nucleosome complex in the fully inserted state of the H2A.Z histone exchange reaction (composite structure)
Method: single particle / : Louder RK, Park G

EMDB-49379:
Human SRCAP-nucleosome complex in the pre-dissociation state of the H2A.Z histone exchange reaction (composite structure)
Method: single particle / : Louder RK, Park G

EMDB-49423:
Human SRCAP-CFDP1-nucleosome complex in the poised state of the H2A.Z histone exchange reaction (consensus map filtered by local resolution)
Method: single particle / : Louder RK, Park G

EMDB-49424:
RuvBL core from poised state of SRCAP-CFDP1-nucleosome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49425:
Arp6-ZnHIT1 module from poised state of SRCAP-CFDP1-nucleosome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49426:
ATPase module from poised state of SRCAP-CFDP1-nucleosome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49427:
Nucleosome from poised state of SRCAP-CFDP1-nucleosome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49428:
Human SRCAP-CFDP1-nucleosome complex in the activated state of the H2A.Z histone exchange reaction (consensus map filtered by local resolution)
Method: single particle / : Louder RK, Park G

EMDB-49429:
RuvBL core from activated state of SRCAP-CFDP1-nucleosome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49430:
Arp6-ZnHIT1 module from activated state of SRCAP-CFDP1-nucleosome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49431:
ATPase module from activated state of SRCAP-CFDP1-nucleosome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49432:
Nucleosome from activated state of SRCAP-CFDP1-nucleosome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49434:
Human SRCAP-CFDP1-hexasome complex in the evicted state of the H2A.Z histone exchange reaction (consensus map filtered by local resolution)
Method: single particle / : Louder RK, Park G

EMDB-49435:
RuvBL core from evicted state of SRCAP-CFDP1-hexasome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49436:
Arp6-ZnHIT1 module from evicted state of SRCAP-CFDP1-hexasome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49437:
ATPase module from evicted state of SRCAP-CFDP1-hexasome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49438:
Hexasome from evicted state of SRCAP-CFDP1-hexasome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49439:
Prenucleosome from pre-inserted state of SRCAP-CFDP1-prenucleosome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49440:
Human SRCAP-nucleosome complex in the fully inserted state of the H2A.Z histone exchange reaction (consensus map filtered by local resolution)
Method: single particle / : Louder RK, Park G

EMDB-49441:
RuvBL core from fully inserted state of SRCAP-nucleosome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49442:
Arp6-ZnHIT1 module from fully inserted state of SRCAP-nucleosome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49443:
ATPase module from fully inserted state of SRCAP-nucleosome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49444:
Nucleosome from fully inserted state of SRCAP-nucleosome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49445:
Human SRCAP-nucleosome complex in the pre-dissociation state of the H2A.Z histone exchange (consensus map filtered by local resolution)
Method: single particle / : Louder RK, Park G

EMDB-49446:
RuvBL core from pre-dissociation state of SRCAP-nucleosome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49447:
Arp6-ZnHIT1 module from pre-dissociation state of SRCAP-nucleosome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49448:
ATPase module from pre-dissociation state of SRCAP-nucleosome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-49449:
Nucleosome from pre-dissociation state of SRCAP-nucleosome complex (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-72455:
Human SRCAP-nucleosome complex in the pre-engaged state (unmasked refinement filtered by local resolution)
Method: single particle / : Louder RK, Park G

EMDB-72456:
Human SRCAP-CFDP1-nucleosome complex in the poised state (unmasked refinement filtered by local resolution)
Method: single particle / : Louder RK, Park G

EMDB-72457:
Human SRCAP-CFDP1-nucleosome complex in the activated state (unmasked refinement filtered by local resolution)
Method: single particle / : Louder RK, Park G

EMDB-72458:
Human SRCAP-CFDP1-nucleosome complex in the unwrapping state (unmasked refinement filtered by local resolution)
Method: single particle / : Louder RK, Park G

EMDB-74291:
Human SRCAP-nucleosome complex in the fully-engaged state, subclass with density for sequestered H2A.Z-H2B (unmasked refinement, filtered by local resolution)
Method: single particle / : Louder RK, Park G

EMDB-74337:
Prenucleosome from pre-inserted state of SRCAP-CFDP1-prenucleosome complex, subclass with alternative dimer position B (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-74338:
Prenucleosome from pre-inserted state of SRCAP-CFDP1-prenucleosome complex, subclass with alternative dimer position C (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-74393:
ATPase module from evicted state of SRCAP-CFDP1-hexasome complex, subclass with density for CFDP1 FAGE domain (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-74396:
Unbound 106-N-32 nucleosome from SRCAP-CFDP1-nucleosome binding reaction
Method: single particle / : Louder RK, Park G

EMDB-74416:
Trident submodule from human SRCAP-CFDP1-nucleosome complex in the poised state (focused refinement)
Method: single particle / : Louder RK, Park G

EMDB-74463:
Evicted state of the human SRCAP-CFDP1-hexasome complex formed in the presence of ADP-BeFx (consensus map filtered by local resolution)
Method: single particle / : Louder RK, Park G

EMDB-74464:
Evicted state of the human SRCAP-CFDP1-hexasome complex formed in the presence of ADP-Vi (consensus map filtered by local resolution)
Method: single particle / : Louder RK, Park G

EMDB-74476:
Evicted state of the human SRCAP-CFDP1-hexasome complex formed in the presence of AMP-PNP (composite structure)
Method: single particle / : Louder RK, Park G

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more