[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 212 items for (author: nakano & r)

EMDB-63904:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes, state1
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-63905:
Cryo-EM structure of the Vo domain of V/A-ATPase in liposomes, state1
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Gerle C, Shigematsu H, Mitsuoka M, Yokoyama K

EMDB-63906:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes, state2
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Gerle C, Shigematsu H, Mitsuoka M, Yokoyama K

EMDB-63907:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes, state3
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Gerle C, Shigematsu H, Mitsuoka M, Yokoyama K

EMDB-63908:
Cryo-EM structure of the Vo domain of V/A-ATPase in liposomes, state2
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-63909:
Cryo-EM structure of the Vo domain of V/A-ATPase in liposomes, state3
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-63910:
Cryo-EM structure of the Vo domain of V/A-ATPase under pmf condition, State3A
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-63911:
Cryo-EM structure of the Vo domain of V/A-ATPase under pmf condition, State3B
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-63912:
Cryo-EM structure of the Vo domain of V/A-ATPase under pmf condition, State3C
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-63913:
Cryo-EM structure of the Vo domain of V/A-ATPase under pmf condition, state3D
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-63914:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under no pmf condition, state1W
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-63915:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under no pmf condition, state1M
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-63916:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under no pmf condition, state1N
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-63917:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under no pmf condition, state2
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Gerle C, Shigematsu H, Mitsuoka M, Yokoyama K

EMDB-63918:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under no pmf condition, state3
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Gerle C, Shigematsu H, Mitsuoka M, Yokoyama K

EMDB-63919:
Cryo-EM structure of the Vo domain of V/A-ATPase in liposomes under no pmf condition,state1
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-63922:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under pmf condition, state1W
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-63923:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under pmf condition, state1M
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-63924:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under pmf condition, state1N
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-63925:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under pmf condition, state3W
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-63926:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under pmf condition, state3M
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-63927:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under pmf condition, state3N
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-63928:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under pmf condition,state2
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Gerle C, Shigematsu H, Mitsuoka M, Yokoyama K

EMDB-63929:
Cryo-EM structure of the Vo domain of V/A-ATPase in liposomes under pmf condition,state1
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Gerle C, Shigematsu H, Mitsuoka M, Yokoyama K

EMDB-63930:
Cryo-EM structure of the Vo domain of V/A-ATPase in liposomes under pmf condition,state2
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Gerle C, Shigematsu H, Mitsuoka M, Yokoyama K

PDB-9u6f:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes, state1
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

PDB-9u6g:
Cryo-EM structure of the Vo domain of V/A-ATPase in liposomes, state1
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Gerle C, Shigematsu H, Mitsuoka M, Yokoyama K

PDB-9u6h:
Cryo-EM structure of the Vo domain of V/A-ATPase in liposomes, state2
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

PDB-9u6i:
Cryo-EM structure of the Vo domain of V/A-ATPase in liposomes, state3
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

PDB-9u6j:
Cryo-EM structure of the Vo domain of V/A-ATPase under pmf condition, State3A
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

PDB-9u6k:
Cryo-EM structure of the Vo domain of V/A-ATPase under pmf condition, State3B
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

PDB-9u6l:
Cryo-EM structure of the Vo domain of V/A-ATPase under pmf condition, State3C
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

PDB-9u6m:
Cryo-EM structure of the Vo domain of V/A-ATPase under pmf condition, state3D
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

PDB-9u6n:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under no pmf condition, state1W
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

PDB-9u6o:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under no pmf condition, state1M
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

PDB-9u6p:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under no pmf condition, state1N
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

PDB-9u6q:
Cryo-EM structure of the Vo domain of V/A-ATPase in liposomes under no pmf condition,state1
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

PDB-9u6t:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under pmf condition, state1W
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

PDB-9u6u:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under pmf condition, state1M
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

PDB-9u6v:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under pmf condition, state1N
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

PDB-9u6w:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under pmf condition, state3W
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

PDB-9u6x:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under pmf condition, state3M
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

PDB-9u6y:
Cryo-EM structure of the V1 domain of V/A-ATPase in liposomes under pmf condition, state3N
Method: single particle / : Nakano A, Kishikawa J, Nishida Y, Shigematsu H, Gerle C, Mitsuoka M, Yokoyama K

EMDB-60989:
Class 2 state of the GfsA KSQ-ancestralAT chimeric didomain in complex with the GfsA ACP domain
Method: single particle / : Chisuga T, Liao Z, Adachi N, Kawasaki M, Moriya T, Senda T, Kudo F, Eguchi T, Miyanaga A

EMDB-61520:
Class 3 state of the GfsA KSQ-ancestralAT chimeric didomain in complex with the GfsA ACP domain
Method: single particle / : Chisuga T, Liao Z, Adachi N, Kawasaki M, Moriya T, Senda T, Kudo F, Eguchi T, Miyanaga A

EMDB-61522:
Class 1 state of the GfsA KSQ-ancestralAT chimeric didomain in complex with the GfsA ACP domain
Method: single particle / : Chisuga T, Liao Z, Adachi N, Kawasaki M, Moriya T, Senda T, Kudo F, Eguchi T, Miyanaga A

PDB-9jj9:
Class 3 state of the GfsA KSQ-ancestralAT chimeric didomain in complex with the GfsA ACP domain
Method: single particle / : Chisuga T, Liao Z, Adachi N, Kawasaki M, Moriya T, Senda T, Kudo F, Eguchi T, Miyanaga A

PDB-9jjb:
Class 1 state of the GfsA KSQ-ancestralAT chimeric didomain in complex with the GfsA ACP domain
Method: single particle / : Chisuga T, Liao Z, Adachi N, Kawasaki M, Moriya T, Senda T, Kudo F, Eguchi T, Miyanaga A

EMDB-39284:
F1 domain of Non-catalytic site depleted and epsilon C-terminal domain deleted FoF1-ATPase from Bacillus PS3,under ATP saturated condition
Method: single particle / : Kobayashi R, Nakano A, Mitsuoka K, Yokoyama K

PDB-8yh8:
F1 domain of Non-catalytic site depleted and epsilon C-terminal domain deleted FoF1-ATPase from Bacillus PS3,under ATP saturated condition
Method: single particle / : Kobayashi R, Nakano A, Mitsuoka K, Yokoyama K

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more