[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 93 items for (author: meade & n)

EMDB-46432:
eIF3-bound 40S, state 1, from VacV infected cells
Method: single particle / : Park C, Ferrell AJ, Shen PS, Walsh D

EMDB-46447:
eIF3-bound 40S, state 2, from VacV infected cells
Method: single particle / : Park C, Ferrell AJ, Shen PS, Walsh D

EMDB-46449:
Free 40S, state 1, from VacV infected cells
Method: single particle / : Park C, Ferrell AJ, Shen PS, Walsh D

EMDB-46450:
Free 40S, state 2, from VacV infected cells
Method: single particle / : Park C, Ferrell AJ, Shen PS, Walsh D

EMDB-48640:
eIF3-bound 40S consensus structure, from VacV infected cells
Method: single particle / : Park C, Ferrell AJ, Shen PS, Walsh D

EMDB-48641:
Free 40S consensus structure, from VacV infected cells
Method: single particle / : Park C, Ferrell AJ, Shen PS, Walsh D

EMDB-48642:
eIF3-bound 40S consensus structure, from mock infected cells
Method: single particle / : Park C, Ferrell AJ, Shen PS, Walsh D

EMDB-48643:
Free 40S consensus structure, from mock infected cells
Method: single particle / : Park C, Ferrell AJ, Shen PS, Walsh D

EMDB-48644:
Free 40S, state 1, from mock infected cells
Method: single particle / : Park C, Ferrell AJ, Shen PS, Walsh D

EMDB-48645:
Free 40S, state 2, from mock infected cells
Method: single particle / : Park C, Ferrell AJ, Shen PS, Walsh D

EMDB-48646:
eIF3-bound 40S, state 1, from mock infected cells
Method: single particle / : Park C, Ferrell AJ, Shen PS, Walsh D

EMDB-48647:
eIF3-bound 40S, state 2, from mock infected cells
Method: single particle / : Park C, Ferrell AJ, Shen PS, Walsh D

EMDB-19525:
Nipah virus (NiV) fusion protein in complex with neutralizing Fab92
Method: single particle / : Avanzato VA, Stass R, Duyvesteyn HME, Bowden TA

PDB-8rvn:
Nipah virus (NiV) fusion protein in complex with neutralizing Fab92
Method: single particle / : Avanzato VA, Stass R, Duyvesteyn HME, Bowden TA

EMDB-24541:
RACK1-S278E 80S rotated state, consensus reconstruction
Method: single particle / : Shen PS, Rollins MG, Shasmal M, Meade N, Astar H, Walsh D

EMDB-24542:
RACK1-S278E, 80S non-rotated state, consensus reconstruction
Method: single particle / : Shen PS, Rollins MG, Shasmal M, Meade N, Astar H, Walsh D

EMDB-24544:
RACK1-S278E, reconstruction from 40S particles (filtered according to local resolution)
Method: single particle / : Shen PS, Rollins MG, Shasmal M, Meade N, Astar H, Walsh D

EMDB-24545:
RACK1-WT, 80S rotated state, consensus reconstruction
Method: single particle / : Shen PS, Rollins MG, Shasmal M, Meade N, Astar H, Walsh D

EMDB-24548:
RACK1-WT, 80S nonrotated consensus reconstruction
Method: single particle / : Shen PS, Rollins MG, Shasmal M, Meade N, Astar H, Walsh D

EMDB-24549:
RACK1-S278E, 60S masked from 80S rotated state, locally refined and filtered
Method: single particle / : Shen PS, Rollins MG, Shasmal M, Meade N, Astar H, Walsh D

EMDB-24552:
RACK1-S278E, 40S body masked from 80S rotated state, locally refined and filtered
Method: single particle / : Shen PS, Rollins MG, Shasmal M, Meade N, Astar H, Walsh D

EMDB-24553:
RACK1-S278E, 40S head masked from 80S rotated state, locally refined and filtered
Method: single particle / : Shen PS, Rollins MG, Shasmal M, Meade N, Astar H, Walsh D

EMDB-24554:
RACK1-WT, 60S masked from 80S rotated state, locally refined and filtered
Method: single particle / : Shen PS, Rollins MG, Shasmal M, Meade N, Astar H, Walsh D

EMDB-24556:
RACK1-WT, 40S body masked from 80S rotated state, locally refined and filtered
Method: single particle / : Shen PS, Rollins MG, Shasmal M, Meade N, Astar H, Walsh D

EMDB-24557:
RACK1-WT, 40S head masked from 80S rotated state, locally refined and filtered
Method: single particle / : Shen PS, Rollins MG, Shasmal M, Meade N, Astar H, Walsh D

EMDB-21714:
Polyclonal immune complex of Fab binding the side of the head of H1 HA from serum of participant 11 at day 0
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21715:
Polyclonal immune complex of Fab binding the receptor binding site of H1 HA from serum of participant 11 at day 0
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21717:
Polyclonal immune complex of Fab binding the stem of H1 HA from serum of participant 11 at day 0
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21719:
Polyclonal immune complex of Fab binding the side of the head of H1 HA from serum of participant 11 at day 6
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21722:
Polyclonal immune complex of Fab binding the stem of H1 HA from serum of participant 11 at day 18
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21723:
Polyclonal immune complex of Fab binding the side of the head of H1 HA from serum of participant 11 at day 18
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21726:
Polyclonal immune complex of Fab binding the receptor binding region of H1 HA from serum of participant 11 at day 18
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21729:
Polyclonal immune complex of Fab binding the receptor binding region of H1 HA from serum of participant 11 at day 35
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21730:
Polyclonal immune complex of Fab binding the side of the head of H1 HA from serum of participant 11 at day 35
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21731:
Polyclonal immune complex of Fab binding the stem of H1 HA from serum of participant 11 at day 35
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21733:
Polyclonal immune complex of Fab binding the stem of H1 HA from serum of participant 4 at day 60
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21734:
Polyclonal immune complex of Fab binding the side of the head of H1 HA from serum of participant 4 at day 60
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21754:
Polyclonal immune complex of Fab binding the top of the head of H1 HA from serum of participant 11 at day 60
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21757:
Monoclonal immune complex of Fab 2B05 from participant 4 at day 5 binding the side of the head of H1 HA
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21758:
Monoclonal immune complex of Fab 2C09 from participant 5 at day 28 binding the vestigial esterase domain of H1 HA
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21759:
Monoclonal immune complex of Fab 1B08 from participant 5 at day 60 binding the vestigial esterase domain of H1 HA
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21760:
Monoclonal immune complex of Fab 4B10 from participant 5 at day 12 binding the vestigial esterase domain of H3 HA
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21761:
Monoclonal immune complex of Fab 1B05 from participant 5 at day 28 binding the stem of H3 HA
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21762:
Monoclonal immune complex of Fab 1A12 from participant 5 at day 12 binding the stem of H1 HA
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21763:
Monoclonal immune complex of Fab 2C11 from participant 4 at day 5 binding the stem of H3 HA
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21804:
Polyclonal immune complex of Fab binding the receptor binding region of H3 HA from serum of participant 11 at day 6
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21806:
Polyclonal immune complex of Fab binding the receptor binding region of H3 HA from serum of participant 11 at day 18
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21809:
Polyclonal immune complex of Fab binding the vestigial esterase of H1 HA from serum of participant 4 at day 12
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21737:
Polyclonal immune complex of Fab binding the side of the head of H3 HA from serum of participant 4 at day 60
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21739:
Polyclonal immune complex of Fab binding the stem of H1 HA from serum of participant 5 at day 60
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more