[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,979 items for (author: lv & g)

PDB-9uje:
Cryo-EM structure of SARS-CoV2 KP.3.1.1 spike protein
Method: single particle / : He MZ

EMDB-53884:
A53T alpha-synuclein fibril - Type 1
Method: helical / : So RWL, Frieg B, Schroeder GF, Watts JC

EMDB-53885:
A53T alpha-synuclein fibril - Type 2
Method: helical / : So RWL, Frieg B, Schroeder GF, Watts JC

EMDB-53886:
Wild-type alpha-synuclein fibril - Type 1
Method: helical / : So RWL, Frieg B, Schroeder GF, Watts JC

EMDB-53887:
Wild-type alpha-synuclein fibril - Type 3-1
Method: helical / : So RWL, Frieg B, Schroeder GF, Watts JC

EMDB-53888:
Wild-type alpha-synuclein fibril - Type 3-2
Method: helical / : So RWL, Frieg B, Schroeder GF, Watts JC

EMDB-53889:
Wild-type alpha-synuclein fibril - Type 4
Method: helical / : So RWL, Frieg B, Schroeder GF, Watts JC

EMDB-53890:
Wild-type alpha-synuclein fibril - Type 5
Method: helical / : So RWL, Frieg B, Schroeder GF, Watts JC

PDB-9rb3:
A53T alpha-synuclein fibril - Type 1
Method: helical / : So RWL, Frieg B, Schroeder GF, Watts JC

PDB-9rb6:
A53T alpha-synuclein fibril - Type 2
Method: helical / : So RWL, Frieg B, Schroeder GF, Watts JC

PDB-9rb7:
Wild-type alpha-synuclein fibril - Type 1
Method: helical / : So RWL, Frieg B, Schroeder GF, Watts JC

PDB-9rb8:
Wild-type alpha-synuclein fibril - Type 3-1
Method: helical / : So RWL, Frieg B, Schroeder GF, Watts JC

PDB-9rb9:
Wild-type alpha-synuclein fibril - Type 3-2
Method: helical / : So RWL, Frieg B, Schroeder GF, Watts JC

PDB-9rba:
Wild-type alpha-synuclein fibril - Type 4
Method: helical / : So RWL, Frieg B, Schroeder GF, Watts JC

PDB-9rbb:
Wild-type alpha-synuclein fibril - Type 5
Method: helical / : So RWL, Frieg B, Schroeder GF, Watts JC

EMDB-75195:
S305I Frontotemporal Lobar Degeneration (FTLD) type I tau filament
Method: helical / : Pan HS, Merz GE, Tse E, Southworth DR

EMDB-75196:
S305I Frontotemporal Lobar Degeneration (FTLD) type II tau filament
Method: helical / : Pan HS, Merz GE, Tse E, Southworth DR

PDB-10ij:
S305I Frontotemporal Lobar Degeneration (FTLD) type I tau filament
Method: helical / : Pan HS, Merz GE, Tse E, Southworth DR

PDB-10ik:
S305I Frontotemporal Lobar Degeneration (FTLD) type II tau filament
Method: helical / : Pan HS, Merz GE, Tse E, Southworth DR

EMDB-53847:
Cryo-EM structure of human ATP citrate lyase in complex with inhibitor EVT0185-CoA
Method: single particle / : Verstraete K, Verschueren K, Savvides SN, Steinberg GR

PDB-9r90:
Cryo-EM structure of human ATP citrate lyase in complex with inhibitor EVT0185-CoA
Method: single particle / : Verstraete K, Verschueren K, Savvides SN, Steinberg GR

EMDB-71677:
HIV-1 bnAb 1-23 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

EMDB-71678:
HIV-1 bnAb 9-71 in complex with BG505 MD39 SOSIP and RM19R
Method: single particle / : Bader DLV, Ozorowski G, Ward AB

EMDB-48668:
Activated Leptotrichia buccalis (Lbu) CRISPR-Cas13a bound to AI-designed anti-CRISPR AIcrVIA1
Method: single particle / : Taveneau C, Knott GJ

EMDB-72725:
Cryo-EM structure of ternary complex BCL6-CRBN-DDB1 with BMS-986458 (local refined), a potent and selective BCL6 ligand directed degrader (LDD)
Method: single particle / : Zhu J, Fang W, Pagarigan B

PDB-9ya9:
Cryo-EM structure of ternary complex BCL6-CRBN-DDB1 with BMS-986458 (local refined), a potent and selective BCL6 ligand directed degrader (LDD)
Method: single particle / : Zhu J, Fang W, Pagarigan B

EMDB-47792:
Structure of full length AMPA receptor GluA2 and auxiliary subunit TARP gamma-2 in complex with anti-miR 17 oligonucleotide RGLS4326
Method: single particle / : Yen LY, Gangwar SP, Yelshanskaya MV, Sobolevsky AI

EMDB-47793:
Structure of AMPA receptor GluA2 and auxiliary subunit TARP gamma-2 (LBD-TMD) in complex with anti-miR 17 oligonucleotide RGLS4326
Method: single particle / : Yen LY, Gangwar SP, Yelshanskaya MV, Sobolevsky AI

PDB-9e9d:
Structure of full length AMPA receptor GluA2 and auxiliary subunit TARP gamma-2 in complex with anti-miR 17 oligonucleotide RGLS4326
Method: single particle / : Yen LY, Gangwar SP, Yelshanskaya MV, Sobolevsky AI

PDB-9e9e:
Structure of AMPA receptor GluA2 and auxiliary subunit TARP gamma-2 (LBD-TMD) in complex with anti-miR 17 oligonucleotide RGLS4326
Method: single particle / : Yen LY, Gangwar SP, Yelshanskaya MV, Sobolevsky AI

EMDB-72760:
Human uPAR bound to the Fab fragment of targeted cancer therapeutic antibody FL1
Method: single particle / : Anane RF, Whisstock JC, Engelholm LH, Law RHP, Ploug M

EMDB-72761:
Mutant human uPAR bound to the Fab fragment of the targeted cancer therapeutic antibody FL1
Method: single particle / : Anane RF, Whisstock JC, Engelholm LH, Law RHP, Ploug M

PDB-9yc5:
Human uPAR bound to the Fab fragment of targeted cancer therapeutic antibody FL1
Method: single particle / : Anane RF, Whisstock JC, Engelholm LH, Law RHP, Ploug M

PDB-9yc6:
Mutant human uPAR bound to the Fab fragment of the targeted cancer therapeutic antibody FL1
Method: single particle / : Anane RF, Whisstock JC, Engelholm LH, Law RHP, Ploug M

EMDB-70791:
Cryo-EM structure of the DDB1/CRBN-MRT-5702-G3BP2 ternary complex
Method: single particle / : Quan C, Petzold G, Gainza P, Tsai J, Bunker RD, Wiedmer L, Donckele EJ

PDB-9os2:
Cryo-EM structure of the DDB1/CRBN-MRT-5702-G3BP2 ternary complex
Method: single particle / : Quan C, Petzold G, Gainza P, Tsai J, Bunker RD, Wiedmer L, Donckele EJ

EMDB-54112:
CryoEM structure of the microtubule-AKAP13 C1 domain complex
Method: single particle / : Giono M, Choi SR, Filipcik P, Steinmetz MO

EMDB-65801:
Cryo-EM structure of SARS-CoV-2 WT 6p spike protein in complex with P5-1C8 IgG (1.5 IgG)
Method: single particle / : Lv NN, Yang RY

EMDB-65802:
Cryo-EM structure of SARS-CoV-2 WT 6p spike protein in complex with P5-1C8 IgG (1 IgG)
Method: single particle / : Lv NN, Yang RY

EMDB-65803:
Immune complex of P5-1C8 Fab binding the RBD of Omicron JN.1 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65804:
Immune complex of P5-1C8 Fab binding the RBD of Omicron BA.1 6p spike protein (2 Fab)
Method: single particle / : Lv NN, Yang RY

EMDB-65805:
Immune complex of P5-1C8 Fab binding the RBD of Omicron BA.1 6p spike protein (1 Fab)
Method: single particle / : Lv NN, Yang RY

EMDB-65806:
Immune complex of P5-1C8 IgG binding the RBD of Omicron BA.1 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65807:
Immune complex of P5-1C8 Fab binding the RBD of SARS-CoV-2 WT 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65808:
Immune complex of P5-1C8 IgG binding the RBD of SARS-CoV-2 WT 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-51635:
P116 from Mycoplasma pneumoniae in complex with mild growth suppressor monoclonal antibody
Method: single particle / : Vizarraga D, Marcos Silva M, Martin Romero J, Guerra P, Fita I, Pinyol J

PDB-9gvg:
P116 from Mycoplasma pneumoniae in complex with mild growth suppressor monoclonal antibody
Method: single particle / : Vizarraga D, Marcos Silva M, Martin Romero J, Guerra P, Fita I, Pinyol J

EMDB-53969:
FZD7 in complex with negative allosteric modulator C407
Method: single particle / : Scharf MM, Graetz L, Kinsolving J, Voss J, Carrasco-Busturia D, Forsberg B, Kolb P, Schulte G

PDB-9rhg:
FZD7 in complex with negative allosteric modulator C407
Method: single particle / : Scharf MM, Graetz L, Kinsolving J, Voss J, Carrasco-Busturia D, Forsberg B, Kolb P, Schulte G

EMDB-64077:
Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2
Method: single particle / : Jin XH, Sun L

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more