[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 17 items for (author: logemann & e)

EMDB-33111:
SR35-LRR with AvrSR35
Method: single particle / : Alexander F, Li ET, Chai JJ

EMDB-33112:
Cryo EM structure of oligomeric complex formed by wheat CNL Sr35 and the effector AvrSr35 of the wheat stem rust pathogen
Method: single particle / : Alexander F, Li ET, Aaron L, Deng YN, Sun Y, Chai JJ

PDB-7xc2:
Cryo EM structure of oligomeric complex formed by wheat CNL Sr35 and the effector AvrSr35 of the wheat stem rust pathogen
Method: single particle / : Alexander F, Li ET, Aaron L, Deng YN, Sun Y, Chai JJ

EMDB-32121:
TIR-dsDNA initial state complex
Method: helical / : Yu D, Song W, Tan EYJ, Xu C, Wu B, Schulze-Lefert P, Chai J

PDB-7x5k:
Tir-dsDNA complex, the initial binding state
Method: helical / : Tan Y, Xu C, Yu D, Song W, Wu B, Schulze-Lefert P, Chai J

EMDB-32125:
L7-TIR nucleic acids complex intermediate complex
Method: helical / : Yu D, Song W, Tan EYJ, Xu C, Wu B, Schulze-Lefert P, Chai J

EMDB-32126:
L7-TIR-nucleic acid End State Complex
Method: helical / : Yu D, Song W, Tan EYJ, Xu C, Wu B, Schulze-Lefert P, Chai J

PDB-7vu8:
L7-Tir domain with bound ligand
Method: single particle / : Tan Y, Xu C, Yu D, Song W, Wu B, Schulze-Lefert P, Chai J

PDB-7x5l:
Tir-dsDNA complex, the initial binding state
Method: helical / : Tan Y, Xu C, Yu D, Song W, Wu B, Schulze-Lefert P, Chai J

PDB-7x5m:
Tir-dsDNA complex, the initial binding state
Method: helical / : Tan Y, Xu C, Yu D, Song W, Wu B, Schulze-Lefert P, Chai J

EMDB-30449:
Cryo-EM structure of plant NLR RPP1 LRR-ID domain in complex with ATR1
Method: single particle / : Ma SC, Lapin D

EMDB-30450:
Cryo-EM structure of plant NLR RPP1 tetramer in complex with ATR1
Method: single particle / : Ma SC, Lapin D

EMDB-30451:
Cryo-EM map of RPP1 mutant in complex with ATR1
Method: single particle / : Ma SC, Lapin D, Liu L, Sun Y, Song W, Zhang XX, Logemann E, Yu DL, Wang J, Jirschitzka J, Han ZF, SchulzeLefert P, Parker JE, Chai JJ

EMDB-30579:
Cryo-EM structure of plant NLR RPP1 tetramer core part
Method: single particle / : Ma SC, Lapin D, Liu L, Sun Y, Song W, Zhang XX, Logemann E, Yu DL, Wang J, Jirschitzka J, Han ZF, SchulzeLefert P, Parker JE, Chai JJ

PDB-7crb:
Cryo-EM structure of plant NLR RPP1 LRR-ID domain in complex with ATR1
Method: single particle / : Ma SC, Lapin D, Liu L, Sun Y, Song W, Zhang XX, Logemann E, Yu DL, Wang J, Jirschitzka J, Han ZF, SchulzeLefert P, Parker JE, Chai JJ

PDB-7crc:
Cryo-EM structure of plant NLR RPP1 tetramer in complex with ATR1
Method: single particle / : Ma SC, Lapin D, Liu L, Sun Y, Song W, Zhang XX, Logemann E, Yu DL, Wang J, Jirschitzka J, Han ZF, SchulzeLefert P, Parker JE, Chai JJ

PDB-7dfv:
Cryo-EM structure of plant NLR RPP1 tetramer core part
Method: single particle / : Ma SC, Lapin D, Liu L, Sun Y, Song W, Zhang XX, Logemann E, Yu DL, Wang J, Jirschitzka J, Han ZF, SchulzeLefert P, Parker JE, Chai JJ

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more