[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 28 items for (author: loerch & s)

EMDB-43564:
Codon sampling state obtained from Anisomycin-treated mammalian ribosomes
Method: single particle / : Loerch S, Petrossian E, Smith PR, Campbell ZT

EMDB-43565:
Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets
Method: single particle / : Loerch S, Petrossian E, Smith PR, Campbell ZT

EMDB-43566:
Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes
Method: single particle / : Loerch S, Petrossian E, Smith PR, Campbell ZT

EMDB-43567:
Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes
Method: single particle / : Loerch S, Petrossian E, Smith PR, Campbell ZT

EMDB-43568:
Mammalian ribosomes bound to Anisomycin in the rotated conformation
Method: single particle / : Loerch S, Petrossian E, Smith PR, Campbell ZT

EMDB-43569:
Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA
Method: single particle / : Loerch S, Petrossian E, Smith PR, Campbell ZT

EMDB-43570:
Mammalian ribosomes bound to Anisomycin in the nonrotated conformation
Method: single particle / : Loerch S, Petrossian E, Smith PR, Campbell ZT

PDB-8vvp:
Codon sampling state obtained from Anisomycin-treated mammalian ribosomes
Method: single particle / : Loerch S, Petrossian E, Smith PR, Campbell ZT

PDB-8vvq:
Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets
Method: single particle / : Loerch S, Petrossian E, Smith PR, Campbell ZT

PDB-8vvr:
Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes
Method: single particle / : Loerch S, Petrossian E, Smith PR, Campbell ZT

PDB-8vvs:
Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes
Method: single particle / : Loerch S, Petrossian E, Smith PR, Campbell ZT

PDB-8vvt:
Mammalian ribosomes bound to Anisomycin in the rotated conformation
Method: single particle / : Loerch S, Petrossian E, Smith PR, Campbell ZT

PDB-8vvu:
Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA
Method: single particle / : Loerch S, Petrossian E, Smith PR, Campbell ZT

PDB-8vvv:
Mammalian ribosomes bound to Anisomycin in the nonrotated conformation
Method: single particle / : Loerch S, Petrossian E, Smith PR, Campbell ZT

EMDB-23500:
80S ribosome from mouse bound to eEF2 (Class II)
Method: single particle / : Loerch S, Smith PR, Kunder N, Stanowick AD, Lou TF, Campbell ZT

EMDB-23501:
80S ribosome from mouse bound to eEF2 (Class I)
Method: single particle / : Loerch S, Smith PR

PDB-7ls1:
80S ribosome from mouse bound to eEF2 (Class II)
Method: single particle / : Loerch S, Smith PR, Kunder N, Stanowick AD, Lou TF, Campbell ZT

PDB-7ls2:
80S ribosome from mouse bound to eEF2 (Class I)
Method: single particle / : Loerch S, Smith PR, Kunder N, Stanowick AD, Lou TF, Campbell ZT

EMDB-21420:
70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)
Method: single particle / : Loerch S, Bao C

EMDB-21421:
70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)
Method: single particle / : Loerch S, Bao C

EMDB-21422:
70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)
Method: single particle / : Loerch S, Bao C

PDB-6vwl:
70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)
Method: single particle / : Loerch S, Bao C, Ling C, Korostelev AA, Grigorieff N, Ermolenko DM

PDB-6vwm:
70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)
Method: single particle / : Loerch S, Bao C, Ling C, Korostelev AA, Grigorieff N, Ermolenko DM

PDB-6vwn:
70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)
Method: single particle / : Loerch S, Bao C, Ling C, Korostelev AA, Grigorieff N, Ermolenko DM

EMDB-8910:
Cryo-EM structure of murine AA amyloid fibril
Method: helical / : Liberta F, Fandrich M, Schmidt M

EMDB-9232:
Cryo-EM structure of human AA amyloid fibril
Method: helical / : Rennegarbe M, Liberta F, Fandrich M, Schmidt M

PDB-6dso:
Cryo-EM structure of murine AA amyloid fibril
Method: helical / : Loerch S, Liberta F, Grigorieff N, Fandrich M, Schmidt M

PDB-6mst:
Cryo-EM structure of human AA amyloid fibril
Method: helical / : Loerch S, Rennegarbe M, Liberta F, Grigorieff N, Fandrich M, Schmidt M

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more