[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 4,400 items for (author: lin & sc)

EMDB-52860:
Ku70/80 bound to 147 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52861:
Ku70/80 bound to 153 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52879:
Ku70/80 with Ku70 linker and SAP domain bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52912:
Ku70/80 bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52958:
DNA-PK bound to a 153 bp H2AX nucleosome model 1
Method: single particle / : Hall C, Chaplin AK

EMDB-53025:
DNA-PK bound to 153 bp H2AX nucleosome model 2
Method: single particle / : Hall C, Chaplin A

EMDB-53026:
Ku80 mediated DNA-PK dimer bound to 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-53237:
DNA-PK bound to 153 bp H2AX nucleosome with ATPyS
Method: single particle / : Hall C, Chaplin AK

PDB-9igw:
Ku70/80 bound to 147 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9igx:
Ku70/80 bound to 153 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9q80:
Ku70/80 with Ku70 linker and SAP domain bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9q8x:
Ku70/80 bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9q9f:
DNA-PK bound to a 153 bp H2AX nucleosome model 1
Method: single particle / : Hall C, Chaplin AK

PDB-9qcr:
DNA-PK bound to 153 bp H2AX nucleosome model 2
Method: single particle / : Hall C, Chaplin A

PDB-9qcs:
Ku80 mediated DNA-PK dimer bound to 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9qms:
DNA-PK bound to 153 bp H2AX nucleosome with ATPyS
Method: single particle / : Hall C, Chaplin AK

EMDB-48622:
Structure of a native Drosophila melanogaster Pol II Elongation Complex with a well-defined Rpb4/Rpb7 stalk
Method: single particle / : Venette-Smith NL, Vishwakarma RK, Dollinger R, Schultz J, Venkatakrishnan V, Babitzke P, Anand G, Gilmour DS, Armache JP, Murakami K

PDB-9mu7:
Structure of a native Drosophila melanogaster Pol II Elongation Complex with a well-defined Rpb4/Rpb7 stalk
Method: single particle / : Venette-Smith NL, Vishwakarma RK, Dollinger R, Schultz J, Venkatakrishnan V, Babitzke P, Anand G, Gilmour DS, Armache JP, Murakami K

EMDB-54556:
Cerebellar GluA1/4 LBD tetramer (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

PDB-9s3z:
Cerebellar GluA1/4 LBD tetramer (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-54543:
Cerebellar GluA2/4 NTD heterophilic tetramer interface (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-54558:
Cerebellar GluA1/4 TMD with TARP gamma 7 (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-54559:
Cerebellar GluAx/A4 TMD with four TARPs (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-55413:
GluA4 N-terminal domain bound to nanobody NB74 (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-55414:
GluA4 LBD-TMD with TARP gamma 2 (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-55418:
GluA4 with TARP gamma2 (consensus refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-55419:
Full-length GluA4 with TARP gamma 2 (composite map)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

PDB-9s3o:
Cerebellar GluA2/4 NTD heterophilic tetramer interface (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

PDB-9s41:
Cerebellar GluA1/4 TMD with TARP gamma 7 (focused refinement)
Method: single particle / : Sengupta N, Scrutton A, Greger IH, Krieger JM

EMDB-70449:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

EMDB-70450:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

PDB-9og1:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

PDB-9og2:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

EMDB-71329:
In situ human P-Z state 80S ribosome
Method: single particle / : Zheng W, Xiong Y

EMDB-71331:
In situ human P-E state 80S ribosome
Method: single particle / : Wei Z, Yong X

EMDB-71332:
In situ human eEF2-A/P-P/E state 80S ribosome
Method: single particle / : Wei Z, Yong Z

EMDB-71333:
In situ human eEF1A-A/T-P state 80S ribosome
Method: single particle / : Wei Z, Yong X

EMDB-71334:
In situ human Hibernating rotate 3 with E-site tRNA state 80S ribosome
Method: single particle / : Wei Z, Yong X

EMDB-71335:
In situ human Hibernating rotate3 with Z site tRNA state 80S ribosome
Method: single particle / : Wei Z, Yong X

EMDB-71336:
In situ human hibernating class2 80S ribosome
Method: single particle / : Wei Z, Yong X

EMDB-71337:
In situ human Hibernating class3 80S ribosome
Method: single particle / : Wei Z, Yong X

EMDB-71338:
In situ human Hibernating class4 80S ribosome
Method: single particle / : Wei Z, Yong X

EMDB-71339:
In situ human Hibernating class5 80S ribosome
Method: single particle / : Wei Z, Yong X

EMDB-71340:
In situ HHT and CHX treated A-P state 80S ribosome
Method: single particle / : Wei Z, Yong X

EMDB-71341:
In situ HHT and CHX treated A-P-Z state 80S ribosome
Method: single particle / : Wei Z, Yong X

EMDB-71342:
In situ HHT and CHX treated human eEF1A-A/T-P state 80S ribosome
Method: single particle / : Wei Z, Yong X

EMDB-71343:
In situ HHT and CHX treated human eEF1A-A/T-P-Z state 80S ribosome
Method: single particle / : Wei Z, Yong X

EMDB-71344:
In situ HHT and CHX treated human P state 80S ribosome
Method: single particle / : Wei Z, Yong X

EMDB-71345:
In situ human post eEF1A-A/T-P-E state 80S ribosome
Method: single particle / : Wei Z, Yong X

EMDB-71346:
In situ human Post-eEF1A-AT-P state 80S ribosome
Method: single particle / : Wei Z, Yong X

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more