[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 27,138 items for (author: ji & g)

EMDB-75011:
MP1104-bound Kappa Opioid Receptor in complex with beta-arrestin1
Method: single particle / : Han J, Chen M, Che T

PDB-9zzo:
MP1104-bound Kappa Opioid Receptor in complex with beta-arrestin1
Method: single particle / : Han J, Chen M, Che T

EMDB-57728:
TnsAB-focused cryo-EM volume of the PseCascade-TniQ-TnsC-TnsAB holocomplex
Method: single particle / : Finocchio G, Oberli S, Schmitz M, Jinek M

EMDB-57729:
TnsC-focused cryo-EM volume of the PseCascade-TniQ-TnsC-TnsAB holocomplex
Method: single particle / : Finocchio G, Oberli S, Schmitz M, Jinek M

EMDB-57730:
Cascade-TniQ-TnsC-focused cryo-EM volume of the PseCascade-TniQ-TnsC-TnsAB holocomplex
Method: single particle / : Finocchio G, Oberli S, Schmitz M, Jinek M

EMDB-57731:
Consensus cryo-EM volume of the PseCascade-TniQ-TnsC-TnsAB holocomplex
Method: single particle / : Finocchio G, Oberli S, Schmitz M, Jinek M

EMDB-57736:
Cryo-EM structure of the PseCascade-TniQ-TnsC-TnsAB holocomplex
Method: single particle / : Finocchio G, Oberli S, Schmitz M, Jinek M

EMDB-57737:
TnsC-focused cryo-EM volume of the PseCascade-TniQ-TnsC complex bound to TnsB-hook motifs
Method: single particle / : Finocchio G, Oberli S, Schmitz M, Jinek M

EMDB-57738:
Consensus cryo-EM volume of the PseCascade-TniQ-TnsC complex bound to TnsB-hook motifs
Method: single particle / : Finocchio G, Oberli S, Schmitz M, Jinek M

EMDB-57739:
Cryo-EM structure of the PseCascade-TniQ-TnsC complex bound to PseTnsB-hook motifs
Method: single particle / : Finocchio G, Oberli S, Schmitz M, Jinek M

EMDB-57750:
TnsC-focused cryo-EM volume of the PseCascade-TniQ-TnsC complex
Method: single particle / : Finocchio G, Oberli S, Schmitz M, Jinek M

EMDB-57751:
Consensus cryo-EM volume of the PseCascade-TniQ-TnsC complex
Method: single particle / : Finocchio G, Oberli S, Schmitz M, Jinek M

EMDB-57757:
Cryo-EM volume of the PseCascade-TniQ complex
Method: single particle / : Finocchio G, Oberli S, Schmitz M, Jinek M

EMDB-57758:
Cryo-EM volume of the PseCascade complex
Method: single particle / : Finocchio G, Oberli S, Schmitz M, Jinek M

EMDB-57765:
Cryo-EM structure of the PseCascade-TniQ-TnsC complex
Method: single particle / : Finocchio G, Oberli S, Schmitz M, Jinek M

PDB-30ga:
Cryo-EM structure of the PseCascade-TniQ-TnsC-TnsAB holocomplex
Method: single particle / : Finocchio G, Oberli S, Schmitz M, Jinek M

PDB-30gb:
Cryo-EM structure of the PseCascade-TniQ-TnsC complex bound to PseTnsB-hook motifs
Method: single particle / : Finocchio G, Oberli S, Schmitz M, Jinek M

PDB-30gt:
Cryo-EM structure of the PseCascade-TniQ-TnsC complex
Method: single particle / : Finocchio G, Oberli S, Schmitz M, Jinek M

EMDB-63580:
Cryo-EM structure of AKG bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-63581:
Cryo-EM structure of Itaconic acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-63583:
Cryo-EM structure of Succinic Acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-80947:
Cryo-EM structure of Maleic Acid bound OXGR1-Gq complex
Method: single particle / : Zhang X, Liu H

PDB-26xh:
Cryo-EM structure of Maleic Acid bound OXGR1-Gq complex
Method: single particle / : Zhang X, Liu H

PDB-9m1r:
Cryo-EM structure of AKG bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9m1s:
Cryo-EM structure of Itaconic acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

PDB-9m1u:
Cryo-EM structure of Succinic Acid bound OXGR1-Gq complex
Method: single particle / : Liu H, Zhang X, Xu HE

EMDB-63852:
Cryo-EM Structure of Human ACE2 Complexed with RacCS20637 RBD
Method: single particle / : Matsumoto K, Akasaka H, Shihoya W, Nureki O

PDB-9u4o:
Cryo-EM Structure of Human ACE2 Complexed with RacCS20637 RBD
Method: single particle / : Matsumoto K, Akasaka H, Shihoya W, Nureki O

EMDB-75431:
The cryoEM structure of T10 type2 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-75434:
The CryoEM structure of T12 type1 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-75435:
The CryoEM structure of T12 type2 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10sd:
The cryoEM structure of T10 type2 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10sg:
The CryoEM structure of T12 type1 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10sh:
The CryoEM structure of T12 type2 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-73305:
Cryo-EM structure of the EBV 1/2 DS bound to the EBNA1 DBD, TRF2, and Rap1
Method: single particle / : Sustek S, Messick TE, Murakami K, Lieberman PM

EMDB-68717:
Cryo-EM structure of Chlamydomonas reinhardtii chloroplast F1Fo-ATP synthase
Method: single particle / : Liu J, Li DY, Guan ZY, Yin P, Yan JJ

PDB-22vl:
Cryo-EM structure of Chlamydomonas reinhardtii chloroplast F1Fo-ATP synthase
Method: single particle / : Liu J, Li DY, Guan ZY, Yin P, Yan JJ

EMDB-65360:
Structure of human proteasome ATPase-CP intermediate assembles with 15min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-65361:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-65362:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vue:
Structure of human proteasome ATPase-CP intermediate assembles with 15min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vuf:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vug:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-52224:
ROCK2 bound with TDI01
Method: single particle / : Aijia W, Shenghai C, Qinghua L, Yan H, Haohao D, Bisen D

PDB-9hjq:
ROCK2 bound with TDI01
Method: single particle / : Aijia W, Shenghai C, Qinghua L, Yan H, Haohao D, Bisen D

EMDB-73755:
Cryo-EM structure of human TRPM4 channel in the warm conformation in complex with calcium and TPPO at 37 degrees Celsius (monomeric TMD-focused map with best-resolved TPPO density)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-73756:
Cryo-EM structure of human TRPM4 channel in the cold conformation in complex with calcium and TPPO at 37 degrees Celsius (monomeric TMD-focused map with best-resolved TPPO density)
Method: single particle / : Jinhong H, Wei L, Juan D

PDB-9z1x:
Cryo-EM structure of human TRPM4 channel in the warm conformation in complex with calcium and TPPO at 37 degrees Celsius (monomeric TMD-focused map with best-resolved TPPO density)
Method: single particle / : Jinhong H, Wei L, Juan D

PDB-9z1y:
Cryo-EM structure of human TRPM4 channel in the cold conformation in complex with calcium and TPPO at 37 degrees Celsius (monomeric TMD-focused map with best-resolved TPPO density)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-65772:
Cryo-EM structure of Aspergillus fumigatus ErdS tetramer
Method: single particle / : Murayama H, Nishimura M, Kise Y, Itoh Y, Nureki O

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more