[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 38,629 items for (author: he & d)

EMDB-46602:
CryoEM structure of anti-MHC-I Fab B1.23.2 complex with HLA-B44:05
Method: single particle / : Jiang J, Natarajan K, Margulies DH, Lei H, Huang R

PDB-9d74:
CryoEM structure of anti-MHC-I Fab B1.23.2 complex with HLA-B44:05
Method: single particle / : Jiang J, Natarajan K, Margulies DH, Lei H, Huang R

EMDB-47768:
Cryo-EM structure of human TWIK-2 at pH 7.5
Method: single particle / : Ma Q, Kumar A, Navratna V, Mosalaganti S

PDB-9e94:
Cryo-EM structure of human TWIK-2 at pH 7.5
Method: single particle / : Ma Q, Kumar A, Navratna V, Mosalaganti S

EMDB-66358:
Cryo-EM structure of TMEM63A-digitonin-cholesterol
Method: single particle / : Lin Y, Zhou Z, Han Y, Cheng D, Wang H, Ju L, Zhang Y, Cox DC, Corry B

PDB-9wxv:
Cryo-EM structure of TMEM63A-digitonin-cholesterol
Method: single particle / : Lin Y, Zhou Z, Han Y, Cheng D, Wang H, Ju L, Zhang Y, Cox DC, Corry B

EMDB-66378:
Cryo-EM structure of EvAS
Method: single particle / : Lyu RQ, Bai L

EMDB-66379:
Cryo-EM structure of PbSS
Method: single particle / : Bai L, Lyu RQ

EMDB-66380:
Cryo-EM structure of the PT domain of EvSS
Method: single particle / : Bai L, Lyu RQ

EMDB-66433:
Cryo-EM structure of EvSS
Method: single particle / : Bai L, Lyu RQ

PDB-9wyv:
Cryo-EM structure of EvAS
Method: single particle / : Lyu RQ, Bai L

PDB-9wyx:
Cryo-EM structure of PbSS
Method: single particle / : Bai L, Lyu RQ

PDB-9wz3:
Cryo-EM structure of the PT domain of EvSS
Method: single particle / : Bai L, Lyu RQ

PDB-9x0f:
Cryo-EM structure of EvSS
Method: single particle / : Bai L, Lyu RQ

EMDB-55368:
Noc2-TAP pre-60S particle - state 2
Method: single particle / : Grundmann L, Gerhalter M, Prattes M, Grishkovskaya I, Kotisch H, Haselbach D, Bergler H

EMDB-49844:
Structure of Nanchung-Inactive-Calmodulin in apo state
Method: single particle / : Fedor JG, Lee SY

EMDB-49845:
Structure of Nanchung-Inactive-Calmodulin in complex with Nicotinamide
Method: single particle / : Fedor JG, Lee SY

EMDB-49846:
Structure of Nanchung-Inactive-Calmodulin in complex with Nicotinamide, EDTA
Method: single particle / : Fedor JG, Lee SY

EMDB-49847:
Structure of Nanchung-Inactive-Calmodulin in complex with Afidopyropen and calcium
Method: single particle / : Fedor JG, Lee SY

EMDB-49848:
Structure of Nanchung-Inactive-Calmodulin in complex with Afidopyropen, EDTA
Method: single particle / : Fedor JG, Lee SY

EMDB-49849:
Structure of a pentameric Nanchung in complex with Afidopyropen
Method: single particle / : Fedor JG, Lee SY

PDB-9nvn:
Structure of Nanchung-Inactive-Calmodulin in apo state
Method: single particle / : Fedor JG, Lee SY

PDB-9nvo:
Structure of Nanchung-Inactive-Calmodulin in complex with Nicotinamide
Method: single particle / : Fedor JG, Lee SY

PDB-9nvp:
Structure of Nanchung-Inactive-Calmodulin in complex with Nicotinamide, EDTA
Method: single particle / : Fedor JG, Lee SY

PDB-9nvq:
Structure of Nanchung-Inactive-Calmodulin in complex with Afidopyropen and calcium
Method: single particle / : Fedor JG, Lee SY

PDB-9nvr:
Structure of Nanchung-Inactive-Calmodulin in complex with Afidopyropen, EDTA
Method: single particle / : Fedor JG, Lee SY

PDB-9nvs:
Structure of a pentameric Nanchung in complex with Afidopyropen
Method: single particle / : Fedor JG, Lee SY

EMDB-49520:
Focused refinement of the prefusion F glycoprotein ectodomain of Nipah virus in complex with DS90 nanobody
Method: single particle / : Low YS, Isaacs A, Modhiran N, Watterson D

EMDB-53173:
Cryo-EM structure of mouse TRPM3 alpha 2 in complex with antagonist Ononetin
Method: single particle / : Shkumatov AV, Schenck S, Brunner JD

PDB-9qhm:
Cryo-EM structure of mouse TRPM3 alpha 2 in complex with antagonist Ononetin
Method: single particle / : Shkumatov AV, Schenck S, Brunner JD

EMDB-48920:
Cryo-ET of FIB-milled synapse region between CD19+ NALM6 leukemia cells and T-cells expressing 8H47 CD19 CAR construct
Method: electron tomography / : Chen X, Walters KJ

EMDB-48925:
Cryo-ET of FIB-milled synapse region between CD19+ NALM6 leukemia cells and T-cells expressing 8H15 CD19 CAR construct
Method: electron tomography / : Chen X, Walters KJ

EMDB-48951:
Cryo-ET of FIB-milled synapse region between CD19+ NALM6 leukemia cells and T-cells expressing 8H15 CD19 CAR construct
Method: electron tomography / : Chen X, Walters KJ

EMDB-49041:
Cryo-ET of FIB-milled synapse region between CD19+ NALM6 leukemia cells and T-cells expressing 8H47 CD19 CAR construct
Method: electron tomography / : Chen X, Walters KJ

EMDB-49051:
Cryo-ET of FIB-milled synapse region between CD19+ NALM6 leukemia cells and T-cells expressing 8H8 CD19 CAR construct, (sample2, region3).
Method: electron tomography / : Chen X, Walters KJ

EMDB-49052:
Cryo-ET of FIB-milled synapse region between CD19+ NALM6 leukemia cells and T-cells expressing 8H8 CD19 CAR construct, (sample2, region2).
Method: electron tomography / : Chen X, Walters KJ

EMDB-49054:
Cryo-ET of FIB-milled synapse region between CD19+ NALM6 leukemia cells and T-cells expressing 8H8 CD19 CAR construct, (sample 1).
Method: electron tomography / : Chen X, Walters KJ

EMDB-56418:
Structure of the MAP2K MEK1 in an inactive conformation in complex with its substrate MAPK ERK2
Method: single particle / : von Velsen J, Juyoux P, Bowler MW

EMDB-56419:
Structure of the MAP2K MEK1 in an active conformation in complex with its substrate MAPK ERK2
Method: single particle / : von Velsen J, Juyoux P, Bowler MW

EMDB-53174:
Cryo-EM structure of mouse TRPM3 alpha 2 in APO state
Method: single particle / : Shkumatov AV, Schenck S, Brunner JD

PDB-9qhn:
Cryo-EM structure of mouse TRPM3 alpha 2 in APO state
Method: single particle / : Shkumatov AV, Schenck S, Brunner JD

EMDB-54906:
Structure of the honeybee GABAA RDL receptor with GABA
Method: single particle / : Laboure T, Nury H

EMDB-54929:
Structure of the honeybee GABAA RDL receptor apo state
Method: single particle / : Laboure T, Nury H

EMDB-54930:
Structure of the honeybee GABAA RDL receptor with Chrodrimanin B
Method: single particle / : Laboure T, Nury H

EMDB-53175:
Cryo-EM structure of mouse TRPM3 alpha 2 in complex with antagonist Primidone
Method: single particle / : Shkumatov AV, Schenck S, Brunner JD

PDB-9qho:
Cryo-EM structure of mouse TRPM3 alpha 2 in complex with antagonist Primidone
Method: single particle / : Shkumatov AV, Schenck S, Brunner JD

EMDB-53177:
Cryo-EM structure of mouse TRPM3 alpha 2 in with agonists CIM-0216 and Pregnenolone sulfate (PregS)
Method: single particle / : Shkumatov AV, Schenck S, Brunner JD

PDB-9qhq:
Cryo-EM structure of mouse TRPM3 alpha 2 in with agonists CIM-0216 and Pregnenolone sulfate (PregS)
Method: single particle / : Shkumatov AV, Schenck S, Brunner JD

EMDB-53253:
Activated 9-subunit COP9 signalosome and neddylated SCF (SKP1-SKP2-CKS1) complex structure
Method: single particle / : Ding S, Clapperton JA, Maeots ME, Shaaban M, Enchev RI

PDB-9qo1:
Activated 9-subunit COP9 signalosome and neddylated SCF (SKP1-SKP2-CKS1) complex structure
Method: single particle / : Ding S, Clapperton JA, Maeots ME, Shaaban M, Enchev RI

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more