[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,604 items for (author: gen & r)

EMDB-55116:
Symmetry relaxed reconstruction of Rhodospirillum rubrum encapsulin:encapsulated ferritin nanocompartment
Method: single particle / : McIver Z, McCorvie TJ, Basle A, Marles-Wright J

EMDB-59321:
Single particle reconstruction of Rhodospirillum rubrum encapsulated ferritin in encapsulin nano compartment
Method: single particle / : Marles-Wright J, McIver Z, Ross J, McCorvie T, Basle A

PDB-33bf:
Single particle reconstruction of Rhodospirillum rubrum encapsulated ferritin in encapsulin nano compartment
Method: single particle / : Marles-Wright J, McIver Z, Ross J, McCorvie T, Basle A

PDB-9sqr:
Symmetry relaxed reconstruction of Rhodospirillum rubrum encapsulin:encapsulated ferritin nanocompartment
Method: single particle / : McIver Z, McCorvie TJ, Basle A, Marles-Wright J

EMDB-75807:
Particulate methane monooxygenase in membrane arrays
Method: single particle / : Tucci FJ, Miller CG, Rosenzweig AC

PDB-11ll:
Particulate methane monooxygenase in membrane arrays
Method: single particle / : Tucci FJ, Miller CG, Rosenzweig AC

EMDB-48771:
Cryo-EM Structure of Apo SeAvs7
Method: single particle / : Zhang J, Feng L

EMDB-48772:
Cryo-EM structure of SeAvs7 MCP EFTu1 monomeric complex
Method: single particle / : Zhang J, Feng L

EMDB-73001:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex
Method: single particle / : Zhang J, Feng L

EMDB-73002:
Cryo-EM structure of SeAvs7 MCP EFTu1 monomeric complex-Map B
Method: single particle / : Zhang J, Feng L

EMDB-73003:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex -Map A
Method: single particle / : Zhang J, Feng L

EMDB-73004:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex-Map E
Method: single particle / : Zhang J, Feng L

EMDB-73005:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex-Map D
Method: single particle / : Zhang J, Feng L

EMDB-73006:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex-Map C
Method: single particle / : Zhang J, Feng L

PDB-9n00:
Cryo-EM Structure of Apo SeAvs7
Method: single particle / : Zhang J, Feng L

PDB-9n01:
Cryo-EM structure of SeAvs7 MCP EFTu1 monomeric complex
Method: single particle / : Zhang J, Feng L

PDB-9yix:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex
Method: single particle / : Zhang J, Feng L

EMDB-59342:
Cryo-EM structure of MAGE-A4 (230-239)-bound HLA-A*02:01 in complex with Fab VR-6
Method: single particle / : Schuster S, Weng TH, Reinhart C, Michel H, Birkenfeld J

EMDB-59343:
Cryo-EM structure of MAGE-A4 (230-239)-bound HLA-A*02:01 in complex with Fab VR-4
Method: single particle / : Schuster S, Weng TH, Reinhart C, Michel H, Birkenfeld J

EMDB-59344:
Cryo-EM structure of MAGE-A4 (230-239)-bound HLA-A*02:01 in complex with Fab VR-58
Method: single particle / : Schuster S, Weng TH, Reinhart C, Michel H, Birkenfeld J

EMDB-54643:
Cryo-EM structure of yeast EMC:Spf1 insertase:dislocase complex in digitonin
Method: single particle / : Klose CJ, Prabu JR, Schulman BA

EMDB-54648:
Cryo-EM structure of endogenous yeast EMC in complex with Spf1 in digitonin: EMC locally refined
Method: single particle / : Klose CJ, Prabu JR, Schulman BA

EMDB-54652:
Cryo-EM structure of endogenous yeast EMC in complex with Spf1 in digitonin
Method: single particle / : Klose CJ, Prabu JR, Schulman BA

EMDB-77868:
Geobacillus stearothermophilus RNase P holoenzyme in complex with precursor tRNA at 2 mM MgCl2
Method: single particle / : Frazao de Souza Degenhardt M, Stagno J, Wang YX

PDB-36uk:
Geobacillus stearothermophilus RNase P holoenzyme in complex with precursor tRNA at 2 mM MgCl2
Method: single particle / : Frazao de Souza Degenhardt M, Stagno J, Wang YX

EMDB-54604:
Cryo-EM structure of yeast EMC:Spf1 insertase:dislocase complex in digitonin - Spf1 component
Method: single particle / : Klose CJ, Prabu JR, Schulman BA

EMDB-54606:
Cryo-EM structure of yeast EMC:Spf1 insertase:dislocase complex in digitonin - EMC component
Method: single particle / : Klose CJ, Prabu JR, Schulman BA

EMDB-54609:
Cryo-EM structure of yeast EMC:Spf1 insertase:dislocase complex in digitonin
Method: single particle / : Klose CJ, Prabu JR, Schulman BA

EMDB-54610:
Cryo-EM structure of yeast EMC:Spf1 insertase:dislocase complex in E1-ATP conformation in digitonin
Method: single particle / : Klose CJ, Prabu JR, Schulman BA

EMDB-54635:
Cryo-EM structure of yeast EMC:Spf1 insertase:dislocase complex in E1-P conformation in digitonin
Method: single particle / : Klose CJ, Prabu JR, Schulman BA

EMDB-54379:
Cryo-EM structure of Posidonia oceanica PSI-LHCI supercomplex - Consensus map
Method: single particle / : Capaldi S, Amelii A, Sanita G, Esposito M, Bassi R

EMDB-54380:
Cryo-EM structure of Posidonia oceanica PSI-LHCI supercomplex - PSI core focused map
Method: single particle / : Capaldi S, Amelii A, Sanita G, Esposito M, Bassi R

EMDB-54396:
Cryo-EM structure of Posidonia oceanica PSI-LHCI supercomplex - LHCI belt focused map
Method: single particle / : Capaldi S, Amelii A, Sanita G, Esposito M, Bassi R

EMDB-54439:
Cryo-EM structure of Posidonia oceanica L-PSI-LHCI-LHCII supercomplex
Method: single particle / : Capaldi S, Amelii A, Sanita G, Esposito E, Bassi R

EMDB-54441:
Cryo-EM structure of Posidonia oceanica L-PSI-LHCI-LHCII supercomplex - PSI core focused map
Method: single particle / : Capaldi S, Amelii A, Sanita G, Esposito E, Bassi R

EMDB-54443:
Cryo-EM structure of Posidonia oceanica L-PSI-LHCI-LHCII supercomplex - LHCI belt focused map
Method: single particle / : Capaldi S, Amelii A, Sanita G, Esposito E, Bassi R

EMDB-54444:
Cryo-EM structure of Posidonia oceanica L-PSI-LHCI-LHCII supercomplex - Lhca1-Lhca4 + LHCII focused map
Method: single particle / : Capaldi S, Amelii A, Sanita G, Esposito E, Bassi R

EMDB-54455:
Cryo-EM structure of Posidonia oceanica PSI-LHCI supercomplex - Composite map
Method: single particle / : Capaldi S, Amelii A, Sanita G, Esposito M, Bassi R

EMDB-54456:
Cryo-EM structure of Posidonia oceanica L-PSI-LHCI-LHCII supercomplex
Method: single particle / : Capaldi S, Amelii A, Sanita G, Esposito M, Bassi R

PDB-9s1l:
Cryo-EM structure of Posidonia oceanica PSI-LHCI supercomplex
Method: single particle / : Capaldi S, Amelii A, Sanita G, Esposito M, Bassi R

PDB-9s1m:
Cryo-EM structure of Posidonia oceanica L-PSI-LHCI-LHCII supercomplex
Method: single particle / : Capaldi S, Amelii A, Sanita G, Esposito M, Bassi R

EMDB-54372:
Single particle reconstruction of Rhodospirillum rubrum encapsulin
Method: single particle / : McIver Z, McCorvie TJ, Basle A, Marles-Wright J

PDB-9ry4:
Single particle reconstruction of Rhodospirillum rubrum encapsulin
Method: single particle / : McIver Z, McCorvie TJ, Basle A, Marles-Wright J

EMDB-72190:
Cryo-EM structure of RotavirusA NSP1-ELOB-ELOC-CUL3
Method: single particle / : Baek K, Glassman CR, Fischer ES

PDB-9q3e:
Cryo-EM structure of RotavirusA NSP1-ELOB-ELOC-CUL3
Method: single particle / : Baek K, Glassman CR, Fischer ES

EMDB-65237:
IF1 bound bovine F-ATP synthase planar dimer
Method: single particle / : Nakano A, Jiko C, Yamashita E, Yokoyama K, Gerle C

EMDB-65238:
IF1 bound bovine ATP synthase tetramer, C2 symmetry imposed
Method: single particle / : Nakano A, Jiko C, Yamashita E, Yokoyama K, Gerle C

EMDB-65239:
IF1 bound bovine ATP synthase monomer: rotary state 1, F1 focused map
Method: single particle / : Nakano A, Jiko C, Yamashita E, Yokoyama K, Gerle C

EMDB-65240:
IF1 bound bovine ATP synthase tetramer, no symmetry imposed
Method: single particle / : Nakano A, Jiko C, Yamashita E, Yokoyama K, Gerle C

EMDB-65241:
IF1 bound bovine ATP synthase tetramer: Fo focused map of the state 1 protomer of dimer B
Method: single particle / : Nakano A, Jiko C, Yamashita E, Yokoyama K, Gerle C

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more