[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 27 items for (author: felsenfeld & d)

EMDB-19844:
Cryo_EM structure of human FAN1 in complex with 5' flap DNA substrate
Method: single particle / : Jeyasankar G, Salerno-Kochan A, Thomsen M

EMDB-19850:
Cryo_EM structure of human FAN1 in complex with 5' flap DNA substrate and PCNA
Method: single particle / : Jeyasankar G, Salerno-Kochan A, Thomsen M

EMDB-51680:
Cryo_EM structure of human FAN1 R507H mutant in complex with 5' flap DNA substrate and PCNA
Method: single particle / : Jeyasankar G, Salerno-Kochan A, Thomsen M

PDB-9eo1:
Cryo_EM structure of human FAN1 in complex with 5' flap DNA substrate
Method: single particle / : Jeyasankar G, Salerno-Kochan A, Thomsen M

PDB-9eoa:
Cryo_EM structure of human FAN1 in complex with 5' flap DNA substrate and PCNA
Method: single particle / : Jeyasankar G, Salerno-Kochan A, Thomsen M

PDB-9gy0:
Cryo_EM structure of human FAN1 R507H mutant in complex with 5' flap DNA substrate and PCNA
Method: single particle / : Jeyasankar G, Salerno-Kochan A, Thomsen M

EMDB-19607:
MutSbeta-ATPgS with kinked MSH2 clamp
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

PDB-8rz9:
MutSbeta-ATPgS with kinked MSH2 clamp
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

EMDB-19606:
MutSbeta-ATPgS with straight MSH2 clamp
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

PDB-8rz8:
MutSbeta-ATPgS with straight MSH2 clamp
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

EMDB-19605:
(CAG)2 DNA-bound MutSbeta in open form with kinked MSH2 clamp
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

PDB-8rz7:
(CAG)2 DNA-bound MutSbeta in open form with kinked MSH2 clamp
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

EMDB-18992:
MutSbeta bound to compound CHDI-00898647 in the canonical DNA-mismatch bound form
Method: single particle / : Haque T, Brace G, Felsenfeld D, Tilack K, Schaertl S, Ballantyne G, Maillard M, Iyer R, Prasad B, Thomsen M, Wilkionson H, Plotnikov N, Ritzefeld M

PDB-8r7v:
MutSbeta bound to compound CHDI-00898647 in the canonical DNA-mismatch bound form
Method: single particle / : Haque T, Brace G, Felsenfeld D, Tilack K, Schaertl S, Ballantyne G, Maillard M, Iyer R, Prasad B, Thomsen M, Wilkionson H, Plotnikov N, Ritzefeld M

EMDB-16972:
MutSbeta bound to 61bp homoduplex DNA
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

PDB-8oma:
MutSbeta bound to 61bp homoduplex DNA
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

EMDB-16964:
MutSbeta bound to (CAG)2 DNA (canonical form)
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

PDB-8olx:
MutSbeta bound to (CAG)2 DNA (canonical form)
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

EMDB-16971:
MutSbeta bound to (CAG)2 DNA (open form)
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

PDB-8om9:
MutSbeta bound to (CAG)2 DNA (open form)
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

EMDB-16973:
DNA-unbound MutSbeta-ATP complex (bent clamp form)
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

PDB-8omo:
DNA-unbound MutSbeta-ATP complex (bent clamp form)
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

EMDB-16974:
DNA-unbound MutSbeta-ATP complex (straight clamp form)
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

PDB-8omq:
DNA-unbound MutSbeta-ATP complex (straight clamp form)
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

EMDB-16975:
MutSbeta bound to homoduplex plasmid DNA
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

EMDB-16969:
DNA-free open form of MutSbeta
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

PDB-8om5:
DNA-free open form of MutSbeta
Method: single particle / : Lee JH, Thomsen M, Daub H, Steinbacher S, Sztyler A, Thieulin-Pardo G, Neudegger T, Plotnikov N, Iyer RR, Wilkinson H, Monteagudo E, Felsenfeld DP, Haque T, Finley M, Dominguez C, Vogt TF, Prasad BC

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more