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Open data
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Basic information
Entry | ![]() | |||||||||
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Title | MutSbeta bound to homoduplex plasmid DNA | |||||||||
![]() | MutSbeta bound to homoduplex plasmid DNA | |||||||||
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Biological species | ![]() | |||||||||
Method | single particle reconstruction / cryo EM / Resolution: 7.08 Å | |||||||||
![]() | Lee J-H / Thomsen M / Daub H / Steinbacher S / Sztyler A / Thieulin-Pardo G / Neudegger T / Plotnikov N / Iyer RR / Wilkinson H ...Lee J-H / Thomsen M / Daub H / Steinbacher S / Sztyler A / Thieulin-Pardo G / Neudegger T / Plotnikov N / Iyer RR / Wilkinson H / Monteagudo E / Felsenfeld DP / Haque T / Finley M / Dominguez C / Vogt TF / Prasad BC | |||||||||
Funding support | ![]()
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![]() | ![]() Title: MutSbeta bound to homoduplex plasmid DNA Authors: Lee J-H / Thomsen M / Daub H / Steinbacher S / Sztyler A / Thieulin-Pardo G / Neudegger T / Plotnikov N / Iyer RR / Wilkinson H / Monteagudo E / Felsenfeld DP / Haque T / Finley M / ...Authors: Lee J-H / Thomsen M / Daub H / Steinbacher S / Sztyler A / Thieulin-Pardo G / Neudegger T / Plotnikov N / Iyer RR / Wilkinson H / Monteagudo E / Felsenfeld DP / Haque T / Finley M / Dominguez C / Vogt TF / Prasad BC | |||||||||
History |
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Structure visualization
Supplemental images |
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Downloads & links
-EMDB archive
Map data | ![]() | 59.6 MB | ![]() | |
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Header (meta data) | ![]() ![]() | 12.9 KB 12.9 KB | Display Display | ![]() |
Images | ![]() | 18.9 KB | ||
Others | ![]() ![]() | 59.4 MB 59.4 MB | ||
Archive directory | ![]() ![]() | HTTPS FTP |
-Validation report
Summary document | ![]() | 695.4 KB | Display | ![]() |
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Full document | ![]() | 695 KB | Display | |
Data in XML | ![]() | 12.3 KB | Display | |
Data in CIF | ![]() | 14.5 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
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Links
EMDB pages | ![]() ![]() |
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Map
File | ![]() | ||||||||||||||||||||
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Annotation | MutSbeta bound to homoduplex plasmid DNA | ||||||||||||||||||||
Voxel size | X=Y=Z: 1.143 Å | ||||||||||||||||||||
Density |
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Symmetry | Space group: 1 | ||||||||||||||||||||
Details | EMDB XML:
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-Supplemental data
-Half map: MutSbeta bound to homoduplex plasmid DNA
File | emd_16975_half_map_1.map | ||||||||||||
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Annotation | MutSbeta bound to homoduplex plasmid DNA | ||||||||||||
Projections & Slices |
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Density Histograms |
-Half map: MutSbeta bound to homoduplex plasmid DNA
File | emd_16975_half_map_2.map | ||||||||||||
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Annotation | MutSbeta bound to homoduplex plasmid DNA | ||||||||||||
Projections & Slices |
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Density Histograms |
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Sample components
-Entire : MutSbeta bound to homoduplex plasmid DNA
Entire | Name: MutSbeta bound to homoduplex plasmid DNA |
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Components |
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-Supramolecule #1: MutSbeta bound to homoduplex plasmid DNA
Supramolecule | Name: MutSbeta bound to homoduplex plasmid DNA / type: complex / ID: 1 / Chimera: Yes / Parent: 0 / Macromolecule list: #1-#2 |
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Source (natural) | Organism: ![]() |
-Experimental details
-Structure determination
Method | cryo EM |
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![]() | single particle reconstruction |
Aggregation state | particle |
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Sample preparation
Buffer | pH: 7.5 |
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Vitrification | Cryogen name: ETHANE-PROPANE |
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Electron microscopy
Microscope | TFS GLACIOS |
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Image recording | Film or detector model: FEI FALCON IV (4k x 4k) / Average electron dose: 59.93 e/Å2 |
Electron beam | Acceleration voltage: 200 kV / Electron source: ![]() |
Electron optics | Illumination mode: OTHER / Imaging mode: BRIGHT FIELD / Nominal defocus max: 2.5 µm / Nominal defocus min: 0.7000000000000001 µm |
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Image processing
Startup model | Type of model: PDB ENTRY PDB model - PDB ID: |
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Final reconstruction | Resolution.type: BY AUTHOR / Resolution: 7.08 Å / Resolution method: FSC 0.143 CUT-OFF / Software - Name: RELION / Number images used: 11791 |
Initial angle assignment | Type: OTHER |
Final angle assignment | Type: MAXIMUM LIKELIHOOD |