[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 171 items for (author: farnung & l)

EMDB-48086:
SIRT6 bound to an H3K27Ac nucleosome
Method: single particle / : Markert J, Wang Z, Cole P, Farnung L

PDB-9eil:
SIRT6 bound to an H3K27Ac nucleosome
Method: single particle / : Markert J, Wang Z, Cole P, Farnung L

EMDB-47841:
CHD1-nucleosome complex (closed state)
Method: single particle / : James AM, Farnung L

EMDB-47845:
CHD1-nucleosome complex (docked state)
Method: single particle / : James AM, Farnung L

EMDB-47852:
CHD1-nucleosome complex (anchored state with entry side DBR)
Method: single particle / : James AM, Farnung L

EMDB-47856:
CHD1-nucleosome complex (docked state with entry side DBR)
Method: single particle / : James AM, Farnung L

EMDB-47857:
CHD1-nucleosome complex (closed state with exit side DBR)
Method: single particle / : James AM, Farnung L

EMDB-49406:
CHD1-nucleosome complex (anchored state)
Method: single particle / : James AM, Farnung L

PDB-9ear:
CHD1-nucleosome complex (closed state)
Method: single particle / : James AM, Farnung L

PDB-9nh8:
CHD1-nucleosome complex (anchored state)
Method: single particle / : James AM, Farnung L

EMDB-47999:
map A RNA Polymerase II
Method: single particle / : Markert J, Farnung L

EMDB-48000:
map B TFIIS
Method: single particle / : Markert J, Farnung L

EMDB-48001:
map C PAF1C
Method: single particle / : Markert J, Farnung L

EMDB-48002:
map D SPT6
Method: single particle / : Markert J, Farnung L

EMDB-48003:
map E IWS1
Method: single particle / : Markert J, Farnung L

EMDB-48004:
map F SETD2 nucleosome
Method: single particle / : Markert J, Farnung L

EMDB-48005:
map G hexasome
Method: single particle / : Markert J, Farnung L

EMDB-48006:
map H nucleosome
Method: single particle / : Markert J, Farnung L

EMDB-48007:
map I RNA Polymerase II
Method: single particle / : Markert J, Farnung L

EMDB-48008:
map J RNA Polymerase II +27 nucleosome
Method: single particle / : Markert J, Farnung L

EMDB-48009:
map K ~ -5 nucleosome
Method: single particle / : Markert J, Farnung L

EMDB-48010:
map L RNA Polymerase II
Method: single particle / : Markert J, Farnung L

EMDB-48011:
map M RNA Polymerase II intact nucleosome
Method: single particle / : Markert J, Farnung L

EMDB-48012:
map N secondary nucleosome
Method: single particle / : Markert J, Farnung L

EMDB-48013:
map O Partial Secondary nucleosome
Method: single particle / : Markert J, Farnung L

EMDB-48014:
map P Full secondary complex
Method: single particle / : Markert J, Farnung L

EMDB-48015:
map 1 RNA Polymerase II
Method: single particle / : Markert J, Farnung L

EMDB-48016:
map 2 PAF1C
Method: single particle / : Markert J, Farnung L

EMDB-48017:
map 3 SPT6
Method: single particle / : Markert J, Farnung L

EMDB-48018:
map4 IWS1 focused
Method: single particle / : Markert J, Farnung L

EMDB-48034:
map V SETD2 nucleosome
Method: single particle / : Markert J, Farnung L

EMDB-48035:
map VI RNA Polymerase II
Method: single particle / : Markert J, Farnung L

EMDB-48036:
map VII Upstream SETD2
Method: single particle / : Markert J, Farnung L

EMDB-48037:
map VIII bp +115 upstream complex
Method: single particle / : Markert J, Farnung L

EMDB-48038:
map Q RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-hexasome, bp ~ -5
Method: single particle / : Markert J, Farnung L

EMDB-48045:
map X bp +115 upstream complex composite
Method: single particle / : Markert J, Farnung L

EMDB-48019:
map 5 SETD2 nucleosome
Method: single particle / : Markert J, Farnung L

EMDB-48020:
map6 SETD2 AID
Method: single particle / : Markert J, Farnung L

EMDB-48021:
map 7 SETD2-SPT6 nucleosome
Method: single particle / : Markert J, Farnung L

EMDB-48022:
map 8 Full upstream
Method: single particle / : Markert J, Farnung L

EMDB-48023:
map Alpha RNA Polymerase II
Method: single particle / : Markert J, Farnung L

EMDB-48025:
map gamma SPT6
Method: single particle / : Markert J, Farnung L

EMDB-48026:
map delta IWS1
Method: single particle / : Markert J, Farnung L

EMDB-48027:
map epsilon SETD2 nucleosome
Method: single particle / : Markert J, Farnung L

EMDB-48028:
map Zeta SETD2-SPT6 nucleosome
Method: single particle / : Markert J, Farnung L

EMDB-48029:
map Eta full upstream
Method: single particle / : Markert J, Farnung L

EMDB-48030:
map I FACT-RNA Polymerase II upstream complex
Method: single particle / : Markert J, Farnung L

EMDB-48031:
map II FACT upstream focused
Method: single particle / : Markert J, Farnung L

EMDB-48032:
map III SPT6 focused
Method: single particle / : Markert J, Farnung L

EMDB-48033:
map IV PAF1C
Method: single particle / : Markert J, Farnung L

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more