[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 90 items for (author: broz & p)

EMDB-44595:
Structure of VRC44.01 Fab in complex with 3BNC117-purified C1080.c3 RnS SOSIP.664 HIV-1 Env trimer
Method: single particle / : Gorman J, Kwong PD

PDB-9bio:
Structure of VRC44.01 Fab in complex with 3BNC117-purified C1080.c3 RnS SOSIP.664 HIV-1 Env trimer
Method: single particle / : Gorman J, Kwong PD

EMDB-41346:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-b.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41359:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-c.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41360:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-d.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41361:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-e.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41362:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-c.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

PDB-8tkc:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-b.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

PDB-8tl2:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-c.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

PDB-8tl3:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-d.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

PDB-8tl4:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-e.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

PDB-8tl5:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-c.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41426:
Cryo-EM structure of TRNM-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP
Method: single particle / : Roark RS, Morano NC, Shapiro LS, Kwong PD

EMDB-41438:
Cryo-EM structure of HERH-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP
Method: single particle / : Roark RS, Hoyt F, Hansen B, Fischer E, Shapiro LS, Kwong PD

EMDB-41440:
Cryo-EM structure of TRNM-f*01 Fab in complex with HIV-1 Env trimer ConC SOSIP
Method: single particle / : Roark RS, Morano NC, Shapiro LS, Kwong PD

EMDB-41459:
Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with antibody GPZ6-b.01 targeting the fusion peptide
Method: single particle / : Zhou T, Morano NC, Roark RS, Kwong PD, Xu J

PDB-8tnu:
Cryo-EM structure of TRNM-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP
Method: single particle / : Roark RS, Morano NC, Shapiro LS, Kwong PD

PDB-8to7:
Cryo-EM structure of HERH-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP
Method: single particle / : Roark RS, Hoyt F, Hansen B, Fischer E, Shapiro LS, Kwong PD

PDB-8to9:
Cryo-EM structure of TRNM-f*01 Fab in complex with HIV-1 Env trimer ConC SOSIP
Method: single particle / : Roark RS, Morano NC, Shapiro LS, Kwong PD

PDB-8top:
Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with antibody GPZ6-b.01 targeting the fusion peptide
Method: single particle / : Zhou T, Morano NC, Roark RS, Kwong PD

EMDB-41309:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-c.01 FAB
Method: single particle / : Morano NC, Hoyt F, Hansen B, Fischer E, Shapiro L

EMDB-41310:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO GPZ6-a.01 FAB
Method: single particle / : Morano NC, Becker JE, Shapiro L, Ho DD

PDB-8tjr:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-a.01 FAB
Method: single particle / : Morano NC, Hoyt F, Hansen B, Fischer E, Shapiro L

PDB-8tjs:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO GPZ6-a.01 FAB
Method: single particle / : Morano NC, Becker JE, Shapiro L

EMDB-41825:
Prefusion-stabilized Langya virus F protein, variant G99C/I109C
Method: single particle / : Byrne PO, McLellan JS

EMDB-42940:
Dimer of Hendra virus prefusion F trimers
Method: single particle / : Byrne PO, Blade EG, McLellan JS

EMDB-42942:
Dimer of Langya virus prefusion F trimers
Method: single particle / : Byrne PO, Blade EG, McLellan JS

PDB-8u1r:
Prefusion-stabilized Langya virus F protein, variant G99C/I109C
Method: single particle / : Byrne PO, McLellan JS

EMDB-28115:
Western Equine Encephalitis Virus-Like Particle in Complex with SKW19 Fab
Method: single particle / : Pletnev S, Tsybovsky Y, Verardi R, Roedeger M, Kwong P

EMDB-28116:
Western Equine Encephalitis Virus-Like Particle in Complex with SKW24 Fab
Method: single particle / : Pletnev S, Tsybovsky Y, Verardi R, Roedeger M, Kwong PD

EMDB-28117:
Eastern Equine Encephalitis Virus-Like Particle in Complex with SKE26 Fab
Method: single particle / : Pletnev S, Verardi R, Roedeger M, Kwong P

EMDB-28118:
Cryo-EM structure of Antibody SKW11 in complex with Western Equine Encephalitis Virus-Like Particle
Method: single particle / : Cerutti G, Verardi R, Roederer M, Shapiro L

EMDB-28119:
Cryo-EM structure of Antibody SKT05 in complex with Western Equine Encephalitis Virus-like Particle
Method: single particle / : Cerutti G, Verardi R, Roederer M, Shapiro L

EMDB-28187:
Cryo-EM I1 reconstruction of antibody SKV09 in complex with VEEV alphavirus VLP
Method: single particle / : Casner RG, Verardi R, Roederer M, Shapiro L

EMDB-28188:
Cryo-EM I1 reconstruction of antibody SKV16 in complex with VEEV alphavirus VLP
Method: single particle / : Casner RG, Verardi R, Roederer M, Shapiro L

EMDB-27566:
Prefusion-stabilized Nipah virus fusion protein
Method: single particle / : Byrne PO, Blade EG, McLellan JS

EMDB-27577:
Prefusion-stabilized Hendra virus fusion protein
Method: single particle / : Byrne PO, Blade EG, McLellan JS

EMDB-27590:
Prefusion-stabilized Nipah virus fusion protein, dimer of trimers
Method: single particle / : Byrne PO, Blade EG, McLellan JS

PDB-8dng:
Prefusion-stabilized Nipah virus fusion protein
Method: single particle / : Byrne PO, Blade EG, McLellan JS

PDB-8dnr:
Prefusion-stabilized Hendra virus fusion protein
Method: single particle / : Byrne PO, Blade EG, McLellan JS

PDB-8do4:
Prefusion-stabilized Nipah virus fusion protein, dimer of trimers
Method: single particle / : Byrne PO, Blade EG, McLellan JS

EMDB-27757:
Cryo-EM Structure of Eastern Equine Encephalitis Virus in complex with SKE26 Fab
Method: single particle / : Pletnev S, Verardi R, Roedeger M, Kwong P

EMDB-28056:
Venezuelan equine encephalitis virus-like particle in complex with Fab SKT05
Method: single particle / : Tsybovsky Y, Pletnev S, Verardi R, Roederer M, Kwong PD

EMDB-28058:
Venezuelan equine encephalitis virus-like particle in complex with Fab SKT05, local refinement
Method: single particle / : Tsybovsky Y, Pletnev S, Verardi R, Roederer M, Kwong PD

EMDB-28059:
Venezuelan equine encephalitis virus-like particle in complex with Fab SKT20
Method: single particle / : Tsybovsky Y, Pletnev S, Verardi R, Roederer M, Kwong PD

EMDB-28060:
Venezuelan equine encephalitis virus-like particle in complex with Fab SKT-20, local refinement
Method: single particle / : Tsybovsky Y, Pletnev S, Verardi R, Roederer M, Kwong PD

PDB-8dwo:
Cryo-EM Structure of Eastern Equine Encephalitis Virus in complex with SKE26 Fab
Method: single particle / : Pletnev S, Verardi R, Roedeger M, Kwong P

PDB-8eeu:
Venezuelan equine encephalitis virus-like particle in complex with Fab SKT05
Method: single particle / : Tsybovsky Y, Pletnev S, Verardi R, Roederer M, Kwong PD

PDB-8eev:
Venezuelan equine encephalitis virus-like particle in complex with Fab SKT-20
Method: single particle / : Tsybovsky Y, Pletnev S, Verardi R, Roederer M, Kwong PD

EMDB-27389:
Cryo-EM Structure of Western Equine Encephalitis Virus
Method: single particle / : Pletnev S, Verardi R, Roedeger M, Kwong P

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more