[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 140 items for (author: bond & dr)

EMDB-47993:
Cryo-EM of type IV pilus from Geobacter metallireducens
Method: helical / : Egorova M, Petersen HA, Chan CH, Bond DR, Wang F

EMDB-41434:
Bottom cylinder of high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L, Kirst H, Kerfeld CA

EMDB-41435:
Central rod disk in C1 symmetry of high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L, Kirst H, Kerfeld CA

EMDB-41436:
Central rod disk in D3 symmetry of high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L, Kirst H, Kerfeld CA

EMDB-41463:
Synechocystis PCC 6803 Phycobilisome quenched by OCP, high resolution
Method: single particle / : Sauer PV, Sutter M, Cupellini L

EMDB-41475:
Top cylinder bound to OCP from high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L

EMDB-41585:
Rod from high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L

PDB-8to2:
Bottom cylinder of high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L

PDB-8to5:
Central rod disk in C1 symmetry of high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L

PDB-8tpj:
Top cylinder bound to OCP from high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L

PDB-8tro:
Rod from high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L

EMDB-17509:
Cryo-EM structure of CAK in complex with inhibitor BS-181
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17510:
Cryo-EM structure of CAK in complex with inhibitor BS-194
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17512:
Cryo-EM structure of CAK in complex with inhibitor ICEC0510-R
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17513:
Cryo-EM structure of CAK in complex with inhibitor ICEC0510-S
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17514:
Cryo-EM structure of CAK in complex with inhibitor ICEC0574
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17515:
Cryo-EM structure of CAK in complex with inhibitor ICEC0768
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17516:
Cryo-EM structure of CAK in complex with inhibitor ICEC0829
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17517:
Cryo-EM structure of CAK in complex with inhibitor ICEC0880 (ring-up conformation)
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17518:
Cryo-EM structure of CAK in complex with inhibitor ICEC0880 (ring-down conformation)
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17519:
Cryo-EM structure of CAK in complex with inhibitor ICEC0914
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17520:
Cryo-EM structure of CAK in complex with inhibitor ICEC0943
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17521:
Cryo-EM structure of CAK in complex with inhibitor dinaciclib
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17522:
Cryo-EM structure of CAK with averaged inhibitor density
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17523:
Cryo-EM structure of apo CAK
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17524:
Cryo-EM map of inhibitor-bound CAK (Krios G4 performance comparison dataset)
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17525:
Cryo-EM map of inhibitor-bound CAK (Glacios G2 performance comparison dataset)
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17526:
Cryo-EM map of inhibitor-bound CAK (+EF performance comparison dataset)
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17527:
Cryo-EM map of inhibitor-bound CAK (-EF performance comparison dataset)
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17536:
Cryo-EM structure of CDK7 subunit of CAK in complex with inhibitor LDC4297
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17754:
Cryo-EM structure of CAK in complex with inhibitor CT7030
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

PDB-8p6w:
Cryo-EM structure of CAK in complex with inhibitor BS-181
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

PDB-8p6x:
Cryo-EM structure of CAK in complex with inhibitor BS-194
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

PDB-8p6z:
Cryo-EM structure of CAK in complex with inhibitor ICEC0510-R
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

PDB-8p70:
Cryo-EM structure of CAK in complex with inhibitor ICEC0510-S
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

PDB-8p71:
Cryo-EM structure of CAK in complex with inhibitor ICEC0574
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

PDB-8p72:
Cryo-EM structure of CAK in complex with inhibitor ICEC0768
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

PDB-8p73:
Cryo-EM structure of CAK in complex with inhibitor ICEC0829
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

PDB-8p74:
Cryo-EM structure of CAK in complex with inhibitor ICEC0880 (ring-up conformation)
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

PDB-8p75:
Cryo-EM structure of CAK in complex with inhibitor ICEC0880 (ring-down conformation)
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

PDB-8p76:
Cryo-EM structure of CAK in complex with inhibitor ICEC0914
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

PDB-8p77:
Cryo-EM structure of CAK in complex with inhibitor ICEC0943
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

PDB-8p78:
Cryo-EM structure of CAK in complex with inhibitor dinaciclib
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

PDB-8p79:
Cryo-EM structure of CAK with averaged inhibitor density
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

PDB-8p7l:
Cryo-EM structure of CDK7 subunit of CAK in complex with inhibitor LDC4297
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

PDB-8plz:
Cryo-EM structure of CAK in complex with inhibitor CT7030
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17129:
Cryo-EM structure of CAK-THZ1
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17470:
Rapid screening cryo-EM map of CAK bound to ICEC0943 (grid VC1-1, 1hr collection)
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17471:
Rapid screening cryo-EM map of CAK bound to ICEC0943 (grid VC1-2, 1hr collection)
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

EMDB-17472:
Rapid screening cryo-EM map of CAK bound to ICEC0768 (grid VC2-1, 1hr collection)
Method: single particle / : Cushing VI, Koh AF, Feng J, Jurgaityte K, Bahl AK, Ali S, Kotecha A, Greber BJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more