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6BZ8	Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Hoffer, E.D, Maehigashi, T, Fagan, C.E, Dunham, C.M. Deposit date: 2017-12-22 Release date: 2018-11-14 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.74 Å) Cite: Ribosomal ambiguity (ram) mutations promote the open (off) to closed (on) transition and thereby increase miscoding. Nucleic Acids Res., 47, 2019
6BOH	Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Svidritskiy, E, Korostelev, A.A. Deposit date: 2017-11-20 Release date: 2018-05-23 Last modified: 2019-12-25 Method: X-RAY DIFFRACTION (3.4 Å) Cite: Conformational Control of Translation Termination on the 70S Ribosome. Structure, 26, 2018
5WFS	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4) Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Fislage, M, Frank, J. Deposit date: 2017-07-12 Release date: 2018-05-02 Last modified: 2024-03-13 Method: ELECTRON MICROSCOPY (3 Å) Cite: Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A. Nucleic Acids Res., 46, 2018
5WFK	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3) Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Fislage, M, Frank, J. Deposit date: 2017-07-12 Release date: 2018-05-02 Last modified: 2019-11-20 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A. Nucleic Acids Res., 46, 2018
5WF0	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2) Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Fislage, M, Frank, J. Deposit date: 2017-07-11 Release date: 2018-05-02 Last modified: 2019-11-20 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A. Nucleic Acids Res., 46, 2018
5WNR	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: DeMirci, H. Deposit date: 2017-08-01 Release date: 2018-02-21 Last modified: 2020-10-21 Method: X-RAY DIFFRACTION (3.5 Å) Cite: 2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation. Nat. Struct. Mol. Biol., 25, 2018
6C4I	Conformation of methylated GGQ in the peptidyl transferase center during translation termination Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Zeng, F, Jin, H. Deposit date: 2018-01-12 Release date: 2018-02-21 Last modified: 2020-01-08 Method: ELECTRON MICROSCOPY (3.24 Å) Cite: Conformation of methylated GGQ in the Peptidyl Transferase Center during Translation Termination. Sci Rep, 8, 2018
6BZ6	Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Hoffer, E.D, Maehigashi, T, Fagan, C.E, Dunham, C.M. Deposit date: 2017-12-22 Release date: 2018-11-14 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.18 Å) Cite: Ribosomal ambiguity (ram) mutations promote the open (off) to closed (on) transition and thereby increase miscoding. Nucleic Acids Res., 47, 2019
5WNT	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: (1R,2S,3S,4R,6R)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-alpha-L-altropyranosyl)-beta-L-arabinofuranosyl]oxy}-3-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-allopyranoside, 16S Ribosomal RNA rRNA, MAGNESIUM ION, ... Authors: DeMirci, H. Deposit date: 2017-08-01 Release date: 2018-02-21 Last modified: 2020-10-21 Method: X-RAY DIFFRACTION (3.3 Å) Cite: 2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation. Nat. Struct. Mol. Biol., 25, 2018
6BUW	Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site. Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Hoffer, E.D, Maehigashi, T, Fagan, C.E, Dunham, C.M. Deposit date: 2017-12-11 Release date: 2018-11-14 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Ribosomal ambiguity (ram) mutations promote the open (off) to closed (on) transition and thereby increase miscoding. Nucleic Acids Res., 47, 2019
6BOK	E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Svidritskiy, E, Korostelev, A.A. Deposit date: 2017-11-20 Release date: 2018-05-23 Last modified: 2019-12-25 Method: X-RAY DIFFRACTION (3.55 Å) Cite: Conformational Control of Translation Termination on the 70S Ribosome. Structure, 26, 2018
6BZ7	Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site. Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Hoffer, E.D, Maehigashi, T, Fagan, C.E, Dunham, C.M. Deposit date: 2017-12-22 Release date: 2018-11-14 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.68 Å) Cite: Ribosomal ambiguity (ram) mutations promote the open (off) to closed (on) transition and thereby increase miscoding. Nucleic Acids Res., 47, 2019
6CAO	Structure of the ribosomal decoding complex at ambient temperature Descriptor: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: DeMirci, H. Deposit date: 2018-01-31 Release date: 2018-07-25 Last modified: 2019-04-17 Method: X-RAY DIFFRACTION (3.45 Å) Cite: Structure of the 30S ribosomal decoding complex at ambient temperature. RNA, 24, 2018
6BY1	E. coli pH03H9 complex Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Amiri, H, Noller, H.F. Deposit date: 2017-12-19 Release date: 2019-02-27 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.94 Å) Cite: Structural evidence for product stabilization by the ribosomal mRNA helicase. Rna, 25, 2019
7UPH	Structure of a ribosome with tethered subunits Descriptor: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ... Authors: Kim, D.S, Watkins, A, Bidstrup, E, Lee, J, Topkar, V.V, Kofman, C, Schwarz, K.J, Liu, Y, Pintilie, G, Roney, E, Das, R, Jewett, M.C. Deposit date: 2022-04-15 Release date: 2022-08-17 Last modified: 2022-08-31 Method: ELECTRON MICROSCOPY (4.18 Å) Cite: Three-dimensional structure-guided evolution of a ribosome with tethered subunits. Nat.Chem.Biol., 18, 2022
7V2P	T.thermophilus 30S ribosome with KsgA, class K5 Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: Raina, R, Singh, J, Anand, R, Vinothkumar, K.R. Deposit date: 2021-08-09 Release date: 2022-04-06 Last modified: 2022-04-27 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases. Acs Chem.Biol., 17, 2022
7V2N	T.thermophilus 30S ribosome with KsgA, class K2 Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: Raina, R, Singh, J, Anand, R, Vinothkumar, K.R. Deposit date: 2021-08-09 Release date: 2022-04-06 Last modified: 2022-04-27 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases. Acs Chem.Biol., 17, 2022
7V2Q	T.thermophilus 30S ribosome with KsgA, class K6 Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: Raina, R, Singh, J, Anand, R, Vinothkumar, K.R. Deposit date: 2021-08-09 Release date: 2022-04-06 Last modified: 2022-04-27 Method: ELECTRON MICROSCOPY (3.24 Å) Cite: Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases. Acs Chem.Biol., 17, 2022
7V2L	T.thermophilus 30S ribosome with KsgA, class K1k2 Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: Raina, R, Singh, J, Anand, R, Vinothkumar, K.R. Deposit date: 2021-08-09 Release date: 2022-04-06 Last modified: 2022-04-27 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases. Acs Chem.Biol., 17, 2022
7V2M	T.thermophilus 30S ribosome with KsgA, class K1k4 Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: Raina, R, Singh, J, Anand, R, Vinothkumar, K.R. Deposit date: 2021-08-09 Release date: 2022-04-06 Last modified: 2022-04-27 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases. Acs Chem.Biol., 17, 2022
7V2O	T.thermophilus 30S ribosome with KsgA, class K4 Descriptor: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: Raina, R, Singh, J, Anand, R, Vinothkumar, K.R. Deposit date: 2021-08-09 Release date: 2022-04-06 Last modified: 2022-04-27 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases. Acs Chem.Biol., 17, 2022
7UNW	Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B) Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... Authors: Basu, R.S, Sherman, M.B, Gagnon, M.G. Deposit date: 2022-04-11 Release date: 2022-06-22 Last modified: 2024-02-14 Method: ELECTRON MICROSCOPY (2.6 Å) Cite: Compact IF2 allows initiator tRNA accommodation into the P site and gates the ribosome to elongation Nat Commun, 13, 2022
7UNV	Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A) Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... Authors: Basu, R.S, Sherman, M.B, Gagnon, M.G. Deposit date: 2022-04-11 Release date: 2022-06-22 Last modified: 2024-02-14 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Compact IF2 allows initiator tRNA accommodation into the P site and gates the ribosome to elongation Nat Commun, 13, 2022
7UNU	Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B) Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... Authors: Basu, R.S, Sherman, M.B, Gagnon, M.G. Deposit date: 2022-04-11 Release date: 2022-06-22 Last modified: 2024-02-14 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Compact IF2 allows initiator tRNA accommodation into the P site and gates the ribosome to elongation Nat Commun, 13, 2022
7UNR	Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A) Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... Authors: Basu, R.S, Sherman, M.B, Gagnon, M.G. Deposit date: 2022-04-11 Release date: 2022-06-22 Last modified: 2024-02-14 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Compact IF2 allows initiator tRNA accommodation into the P site and gates the ribosome to elongation Nat Commun, 13, 2022

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