PDB: 903 resultsInfo pagesStatus searchChemie searchBIRD

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7QGK	The mRubyFT protein, Genetically Encoded Blue-to-Red Fluorescent Timer in its red state Descriptor: MAGNESIUM ION, The red form of the mRubyFT protein, Genetically Encoded Blue-to-Red Fluorescent Timer Authors: Boyko, K.M, Nikolaeva, A.Y, Gaivoronskii, F.A, Vlaskina, A.V, Subach, O.M, Popov, V.O, Subach, F.V. Deposit date: 2021-12-08 Release date: 2022-03-23 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.5 Å) Cite: The mRubyFT Protein, Genetically Encoded Blue-to-Red Fluorescent Timer. Int J Mol Sci, 23, 2022
7BHG	Gene-engineered variant of FusionRed with Trp based chromophore - 2.1A Descriptor: Fluorescent protein FP480 Authors: Pletnev, V.Z, Pletnev, S.V, Pletneva, N.V. Deposit date: 2021-01-11 Release date: 2022-03-02 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.09 Å) Cite: Gene-engineered variant of FusionRed with Trp based chromophore - 2.1A To Be Published
7OIN	Crystal structure of LSSmScarlet - a genetically encoded red fluorescent protein with a large Stokes shift Descriptor: LSSmScarlet - Genetically Encoded Red Fluorescent Proteins with a Large Stokes Shift, SODIUM ION, SULFATE ION Authors: Boyko, K.M, Nikolaeva, A.Y, Dorovatovskii, P.V, Subach, O.M, Vlaskina, A.V, Agapova, Y.K, Ivashkina, O.I, Popov, V.O, Subach, F.V. Deposit date: 2021-05-12 Release date: 2022-02-16 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.4 Å) Cite: LSSmScarlet, dCyRFP2s, dCyOFP2s and CRISPRed2s, Genetically Encoded Red Fluorescent Proteins with a Large Stokes Shift. Int J Mol Sci, 22, 2021
7PD0	Functional and structural characterization of redox sensitive superfolder green fluorescent protein and variants Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Green fluorescent protein, ... Authors: Fritz-Wolf, K, Heimsch, K.C, Schuh, A.K, Becker, K. Deposit date: 2021-08-04 Release date: 2022-02-16 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2 Å) Cite: Structure and Function of Redox-Sensitive Superfolder Green Fluorescent Protein Variant. Antioxid.Redox Signal., 37, 2022
7PCZ	Functional and structural characterization of redox sensitive superfolder green fluorescent protein and variants Descriptor: ETHANOL, GLYCEROL, Green fluorescent protein Authors: Fritz-Wolf, K, Heimsch, K.C, Schuh, A.K, Becker, K. Deposit date: 2021-08-04 Release date: 2022-02-16 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.35 Å) Cite: Structure and Function of Redox-Sensitive Superfolder Green Fluorescent Protein Variant. Antioxid.Redox Signal., 37, 2022
7PCA	Functional and structural characterization of redox sensitive superfolder green fluorescent protein and variants Descriptor: ETHANOL, FORMAMIDE, GLYCEROL, ... Authors: Fritz-Wolf, K, Heimsch, K.C, Schuh, A.K, Becker, K. Deposit date: 2021-08-03 Release date: 2022-02-16 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.05 Å) Cite: Structure and Function of Redox-Sensitive Superfolder Green Fluorescent Protein Variant. Antioxid.Redox Signal., 37, 2022
7RY2	mSandy2 Descriptor: mSandy2 Authors: Chica, R.A, Legault, S, Thompson, M.C. Deposit date: 2021-08-24 Release date: 2022-01-26 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Generation of bright monomeric red fluorescent proteins via computational design of enhanced chromophore packing. Chem Sci, 13, 2022
7SUN	Atomic model of prestin from gerbil (Meriones unguiculatus) Descriptor: Prestin, Enhanced Yellow Fluorescent Protein chimera Authors: Butan, C, Santos-Sacchi, J. Deposit date: 2021-11-17 Release date: 2022-01-12 Last modified: 2024-02-28 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Single particle cryo-EM structure of the outer hair cell motor protein prestin. Nat Commun, 13, 2022
7DIG	Green fluorescent protein from Dendronephthya sp. SSAL-2002 Descriptor: Green fluorescent protein Authors: Nam, K.H. Deposit date: 2020-11-19 Release date: 2021-12-08 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Metal-Induced Fluorescence Quenching of Photoconvertible Fluorescent Protein DendFP. Molecules, 27, 2022
7FHN	Structure of AtTPC1 D240A/D454A/E528A mutant with 1 mM Ca2+ Descriptor: CALCIUM ION, Two pore calcium channel protein 1,GFP Authors: Ye, F, Xu, L, Li, X, Jiang, Y, Guo, J. Deposit date: 2021-07-29 Release date: 2021-12-01 Last modified: 2022-03-16 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Voltage-gating and cytosolic Ca 2+ activation mechanisms of Arabidopsis two-pore channel AtTPC1. Proc.Natl.Acad.Sci.USA, 118, 2021
7FHL	Structure of AtTPC1 with 50 mM Ca2+ Descriptor: AtTPC1-Cter, CALCIUM ION, Two pore calcium channel protein 1,GFP Authors: Ye, F, Xu, L, Li, X, Jiang, Y, Guo, J. Deposit date: 2021-07-29 Release date: 2021-12-01 Last modified: 2022-03-16 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Voltage-gating and cytosolic Ca 2+ activation mechanisms of Arabidopsis two-pore channel AtTPC1. Proc.Natl.Acad.Sci.USA, 118, 2021
7FHO	Structure of AtTPC1 D240A/D454A/E528A mutant with 50 mM Ca2+ Descriptor: CALCIUM ION, Two pore calcium channel protein 1,GFP Authors: Ye, F, Xu, L, Li, X, Jiang, Y, Guo, J. Deposit date: 2021-07-29 Release date: 2021-12-01 Last modified: 2022-03-16 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Voltage-gating and cytosolic Ca 2+ activation mechanisms of Arabidopsis two-pore channel AtTPC1. Proc.Natl.Acad.Sci.USA, 118, 2021
7FHK	Structure of AtTPC1 with 1 mM Ca2+ Descriptor: AtTPC1-Cter, CALCIUM ION, Two pore calcium channel protein 1,GFP Authors: Ye, F, Xu, L, Li, X, Jiang, Y, Guo, J. Deposit date: 2021-07-29 Release date: 2021-12-01 Last modified: 2022-03-16 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Voltage-gating and cytosolic Ca 2+ activation mechanisms of Arabidopsis two-pore channel AtTPC1. Proc.Natl.Acad.Sci.USA, 118, 2021
7KM4	Crystal Structure of Oxidized Version of Redox-Sensitive Superfolder Green Fluorescent Protein Descriptor: Green fluorescent protein Authors: Nguyen, T, Nicely, N.I, McCafferty, D.G. Deposit date: 2020-11-02 Release date: 2021-11-10 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.65 Å) Cite: Crystal Structure of Oxidized Version of Redox-Sensitive Superfolder Green Fluorescent Protein To be Published
7PNN	mVenus released from fusion protein. Descriptor: CHLORIDE ION, mVenus Authors: Bloch, Y, Savvides, S.N. Deposit date: 2021-09-07 Release date: 2021-11-03 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.43 Å) Cite: mVenus released from fusion protein. To Be Published
6ZSM	Crystal structure of rsGCaMP double mutant Ile80His/Val116Ile in the ON state (non-illuminated) Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, FORMIC ACID, ... Authors: Janowski, R, Fuenzalida-Werner, J.P, Mishra, K, Stiel, A.C, Niessing, D. Deposit date: 2020-07-16 Release date: 2021-10-27 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Genetically encoded photo-switchable molecular sensors for optoacoustic and super-resolution imaging. Nat.Biotechnol., 40, 2022
6ZSN	Crystal structure of rsGCaMP double mutant Ile80His/Val116Ile in the OFF state (illuminated) Descriptor: CALCIUM ION, FORMIC ACID, Green fluorescent protein,Green fluorescent protein,Calmodulin, ... Authors: Janowski, R, Fuenzalida-Werner, J.P, Mishra, K, Stiel, A.C, Niessing, D. Deposit date: 2020-07-16 Release date: 2021-10-27 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Genetically encoded photo-switchable molecular sensors for optoacoustic and super-resolution imaging. Nat.Biotechnol., 40, 2022
7RRH	Crystal structure of fast switching R66M/M159T mutant of fluorescent protein Dronpa (Dronpa2) Descriptor: Fluorescent protein Dronpa Authors: Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G. Deposit date: 2021-08-09 Release date: 2021-10-13 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.747 Å) Cite: Energetic Basis and Design of Enzyme Function Demonstrated Using GFP, an Excited-State Enzyme. J.Am.Chem.Soc., 144, 2022
7RRI	Crystal structure of fast switching S142A/M159T mutant of fluorescent protein Dronpa (Dronpa2) Descriptor: Fluorescent protein Dronpa Authors: Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G. Deposit date: 2021-08-09 Release date: 2021-10-13 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.643 Å) Cite: Energetic Basis and Design of Enzyme Function Demonstrated Using GFP, an Excited-State Enzyme. J.Am.Chem.Soc., 144, 2022
7RRJ	Crystal structure of fast switching M159Q mutant of fluorescent protein Dronpa (Dronpa2) Descriptor: Fluorescent protein Dronpa Authors: Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G. Deposit date: 2021-08-09 Release date: 2021-10-13 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Energetic Basis and Design of Enzyme Function Demonstrated Using GFP, an Excited-State Enzyme. J.Am.Chem.Soc., 144, 2022
7RRK	Crystal structure of fast switching M159E mutant of fluorescent protein Dronpa (Dronpa2) Descriptor: Fluorescent protein Dronpa Authors: Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G. Deposit date: 2021-08-09 Release date: 2021-10-13 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.929 Å) Cite: Energetic Basis and Design of Enzyme Function Demonstrated Using GFP, an Excited-State Enzyme. J.Am.Chem.Soc., 144, 2022
7E53	Crystal structure of sfGFP complexed with the nanobody nb2 at 2.2 Angstron resolution Descriptor: Green fluorescent protein, Green fluorescent protein's nanobody nb2 Authors: Ding, Y, Zhong, P.Y. Deposit date: 2021-02-16 Release date: 2021-10-13 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.21 Å) Cite: Structural insights into two distinct nanobodies recognizing the same epitope of green fluorescent protein. Biochem.Biophys.Res.Commun., 565, 2021
7V89	Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form conformation 1 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Angiotensin-converting enzyme 2 (ACE2) ectodomain, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form conformation 1 To Be Published
7V81	Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, two ACE2-bound form Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, two ACE2-bound form To Be Published
7V87	Local refinement of SARS-CoV-2 S-Kappa variant (B.1.617.1) RBD and Angiotensin-converting enzyme 2 (ACE2) ectodomain Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Angiotensin-converting enzyme 2 (ACE2) ectodomain, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Local refinement of SARS-CoV-2 S-Kappa variant (B.1.617.1) RBD and Angiotensin-converting enzyme 2 (ACE2) ectodomain To Be Published

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