Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4NSW
DownloadVisualize
BU of 4nsw by Molmil
Crystal structure of the BAR-PH domain of ACAP1
Descriptor: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1
Authors:Pang, X, Zhang, K, Ma, J, Zhou, Q, Sun, F.
Deposit date:2013-11-29
Release date:2014-10-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A PH Domain in ACAP1 Possesses Key Features of the BAR Domain in Promoting Membrane Curvature
Dev.Cell, 31, 2014
5JJD
DownloadVisualize
BU of 5jjd by Molmil
crystal structure of the ceramide transfer protein PH and START domain complex
Descriptor: Collagen type IV alpha-3-binding protein, DI(HYDROXYETHYL)ETHER, TRIETHYLENE GLYCOL
Authors:Prashek, J, Bouyain, S, Yao, X.
Deposit date:2016-04-23
Release date:2017-07-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.403 Å)
Cite:Interaction between the PH and START domains of ceramide transfer protein competes with phosphatidylinositol 4-phosphate binding by the PH domain.
J. Biol. Chem., 292, 2017
5A3F
DownloadVisualize
BU of 5a3f by Molmil
Crystal structure of the dynamin tetramer
Descriptor: DYNAMIN 3
Authors:Reubold, T.F, Faelber, K, Plattner, N, Posor, Y, Branz, K, Curth, U, Schlegel, J, Anand, R, Manstein, D.J, Noe, F, Haucke, V, Daumke, O, Eschenburg, S.
Deposit date:2015-05-29
Release date:2015-08-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Crystal Structure of the Dynamin Tetramer
Nature, 525, 2015
5L81
DownloadVisualize
BU of 5l81 by Molmil
Crystal structure of the PH domain of murine kindlin-3
Descriptor: Fermitin family homolog 3, SODIUM ION
Authors:Ni, T, Harlos, K, Gilbert, R.J.C.
Deposit date:2016-06-06
Release date:2017-01-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Structure and lipid-binding properties of the kindlin-3 pleckstrin homology domain.
Biochem. J., 474, 2017
5C5B
DownloadVisualize
BU of 5c5b by Molmil
Crystal Structure of Human APPL BAR-PH Heterodimer
Descriptor: DCC-interacting protein 13-alpha, DCC-interacting protein 13-beta, GLYCEROL
Authors:Chen, Y.J, Chen, B.
Deposit date:2015-06-19
Release date:2016-06-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of Human APPL BAR-PH Heterodimer
To Be Published
4UUD
DownloadVisualize
BU of 4uud by Molmil
Human dynamin 1 K44A superconstricted polymer stabilized with GTP
Descriptor: DYNAMIN-1
Authors:Sundborger, A.C, Fang, S, Heymann, J.A, Ray, P, Chappie, J.S, Hinshaw, J.E.
Deposit date:2014-07-25
Release date:2014-08-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (12.5 Å)
Cite:A Dynamin Mutant Defines a Superconstricted Prefission State.
Cell Rep., 8, 2014
6D8Z
DownloadVisualize
BU of 6d8z by Molmil
Crystal Structure of the C-terminal Guanine Nucleotide Exchange Factor Module of Human Trio
Descriptor: Triple functional domain protein
Authors:Bandekar, S, Tesmer, J.J.
Deposit date:2018-04-27
Release date:2019-02-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure of the C-terminal guanine nucleotide exchange factor module of Trio in an autoinhibited conformation reveals its oncogenic potential.
Sci Signal, 12, 2019
6DLU
DownloadVisualize
BU of 6dlu by Molmil
Cryo-EM of the GMPPCP-bound human dynamin-1 polymer assembled on the membrane in the constricted state
Descriptor: Dynamin-1, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
Authors:Kong, L, Wang, H, Fang, S, Canagarajah, B, Kehr, A.D, Rice, W.J, Hinshaw, J.E.
Deposit date:2018-06-02
Release date:2018-08-01
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Cryo-EM of the dynamin polymer assembled on lipid membrane.
Nature, 560, 2018
4XH3
DownloadVisualize
BU of 4xh3 by Molmil
Mechanistic insights into anchorage of the contractile ring from yeast to humans
Descriptor: Actin-binding protein anillin
Authors:Sun, L.F, Guan, R.F, Chen, Z.C.
Deposit date:2015-01-04
Release date:2015-07-15
Last modified:2022-03-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanistic insights into the anchorage of the contractile ring by anillin and mid1
Dev.Cell, 33, 2015
6DLV
DownloadVisualize
BU of 6dlv by Molmil
Cryo-EM of the GTP-bound human dynamin-1 polymer assembled on the membrane in the super constricted state
Descriptor: Dynamin-1
Authors:Kong, L, Wang, H, Fang, S, Canagarajah, B, Kehr, A.D, Rice, W.J, Hinshaw, J.E.
Deposit date:2018-06-02
Release date:2018-08-01
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (10.1 Å)
Cite:Cryo-EM of the dynamin polymer assembled on lipid membrane.
Nature, 560, 2018
5H3D
DownloadVisualize
BU of 5h3d by Molmil
Helical structure of membrane tubules decorated by ACAP1 (BARPH doamin) protein by cryo-electron microscopy and MD simulation
Descriptor: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1
Authors:Chan, C, Pang, X.Y, Zhang, Y, Sun, F, Fan, J.
Deposit date:2016-10-22
Release date:2019-01-16
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (14 Å)
Cite:ACAP1 assembles into an unusual protein lattice for membrane deformation through multiple stages.
Plos Comput.Biol., 15, 2019
6E31
DownloadVisualize
BU of 6e31 by Molmil
Crystal structure of RIAM in an autoinhibited configuration.
Descriptor: Rap1-interacting adapter molecule
Authors:Chang, Y.C, Su, W, Zhang, H, Huang, Q, Philips, M.R, Wu, J.
Deposit date:2018-07-12
Release date:2019-02-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular basis for autoinhibition of RIAM regulated by FAK in integrin activation.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
4Y94
DownloadVisualize
BU of 4y94 by Molmil
Crystal structure of the PH-TH module of Bruton's tyrosine kinase bound to inositol hexakisphosphate
Descriptor: INOSITOL HEXAKISPHOSPHATE, Non-specific protein-tyrosine kinase, ZINC ION
Authors:Wang, Q, Kuriyan, J.
Deposit date:2015-02-16
Release date:2015-03-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Autoinhibition of Bruton's tyrosine kinase (Btk) and activation by soluble inositol hexakisphosphate.
Elife, 4, 2015
4Y93
DownloadVisualize
BU of 4y93 by Molmil
Crystal structure of the PH-TH-kinase construct of Bruton's tyrosine kinase (Btk)
Descriptor: 4-tert-butyl-N-[2-methyl-3-(4-methyl-6-{[4-(morpholin-4-ylcarbonyl)phenyl]amino}-5-oxo-4,5-dihydropyrazin-2-yl)phenyl]benzamide, CALCIUM ION, Non-specific protein-tyrosine kinase,Non-specific protein-tyrosine kinase, ...
Authors:Wang, Q, Kuriyan, J.
Deposit date:2015-02-16
Release date:2015-03-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Autoinhibition of Bruton's tyrosine kinase (Btk) and activation by soluble inositol hexakisphosphate.
Elife, 4, 2015
6OLU
DownloadVisualize
BU of 6olu by Molmil
RIAM RA-PH core structure in the P212121 space group
Descriptor: Amyloid beta A4 precursor protein-binding family B member 1-interacting protein
Authors:Wu, J.
Deposit date:2019-04-17
Release date:2020-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Phosphorylation of RIAM by src promotes integrin activation by unmasking the PH domain of RIAM.
Structure, 29, 2021
6O6H
DownloadVisualize
BU of 6o6h by Molmil
RIAM cc-RA-PH structure in the P21212 space group
Descriptor: Amyloid beta A4 precursor protein-binding family B member 1-interacting protein
Authors:Wu, J.
Deposit date:2019-03-06
Release date:2020-09-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Phosphorylation of RIAM by Src Promotes Integrin Activation by Unmasking the PH Domain of RIAM.
Structure, 2020
6FSF
DownloadVisualize
BU of 6fsf by Molmil
Crystal structure of the tandem PX-PH-domains of Bem3 from Saccharomyces cerevisiae
Descriptor: GTPase-activating protein BEM3
Authors:Ali, I, Eu, S, Koch, D, Bleimling, N, Goody, R.S, Mueller, M.P.
Deposit date:2018-02-19
Release date:2018-05-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the tandem PX-PH domains of Bem3 from Saccharomyces cerevisiae.
Acta Crystallogr F Struct Biol Commun, 74, 2018
3CXB
DownloadVisualize
BU of 3cxb by Molmil
Crystal Structure of sifa and skip
Descriptor: Pleckstrin homology domain-containing family M member 2, Protein sifA
Authors:Huang, Z, Chai, J.
Deposit date:2008-04-24
Release date:2008-12-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and function of Salmonella SifA indicate that its interactions with SKIP, SseJ, and RhoA family GTPases induce endosomal tubulation
Cell Host Microbe, 4, 2008
1B55
DownloadVisualize
BU of 1b55 by Molmil
PH DOMAIN FROM BRUTON'S TYROSINE KINASE IN COMPLEX WITH INOSITOL 1,3,4,5-TETRAKISPHOSPHATE
Descriptor: INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, TYROSINE-PROTEIN KINASE BTK, ZINC ION
Authors:Djinovic Carugo, K, Baraldi, E, Hyvoenen, M, Lo Surdo, P, Riley, A.M, Potter, B.V.L, O'Brien, R, Ladbury, J.E, Saraste, M.
Deposit date:1999-01-12
Release date:1999-06-15
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the PH domain from Bruton's tyrosine kinase in complex with inositol 1,3,4,5-tetrakisphosphate.
Structure Fold.Des., 7, 1999
1BWN
DownloadVisualize
BU of 1bwn by Molmil
PH DOMAIN AND BTK MOTIF FROM BRUTON'S TYROSINE KINASE MUTANT E41K IN COMPLEX WITH INS(1,3,4,5)P4
Descriptor: BRUTON'S TYROSINE KINASE, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, ZINC ION
Authors:Djinovic Carugo, K, Baraldi, E, Hyvoenen, M, Lo Surdo, P, Riley, A, Potter, B, Saraste, M.
Deposit date:1998-09-25
Release date:1999-06-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the PH domain from Bruton's tyrosine kinase in complex with inositol 1,3,4,5-tetrakisphosphate.
Structure Fold.Des., 7, 1999
1BTK
DownloadVisualize
BU of 1btk by Molmil
PH DOMAIN AND BTK MOTIF FROM BRUTON'S TYROSINE KINASE MUTANT R28C
Descriptor: BRUTON'S TYROSINE KINASE, SODIUM ION, ZINC ION
Authors:Hyvonen, M, Saraste, M.
Deposit date:1997-07-01
Release date:1997-09-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the PH domain and Btk motif from Bruton's tyrosine kinase: molecular explanations for X-linked agammaglobulinaemia.
EMBO J., 16, 1997
3FEH
DownloadVisualize
BU of 3feh by Molmil
Crystal structure of full length centaurin alpha-1
Descriptor: Centaurin-alpha-1, UNKNOWN ATOM OR ION, ZINC ION
Authors:Shen, L, Tong, Y, Tempel, W, MacKenzie, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2008-11-29
Release date:2008-12-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Phosphorylation-independent dual-site binding of the FHA domain of KIF13 mediates phosphoinositide transport via centaurin {alpha}1.
Proc.Natl.Acad.Sci.USA, 107, 2010
3FM8
DownloadVisualize
BU of 3fm8 by Molmil
Crystal structure of full length centaurin alpha-1 bound with the FHA domain of KIF13B (CAPRI target)
Descriptor: Centaurin-alpha-1, Kinesin-like protein KIF13B, SULFATE ION, ...
Authors:Shen, L, Tong, Y, Tempel, W, MacKenzie, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2008-12-19
Release date:2009-08-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Phosphorylation-independent dual-site binding of the FHA domain of KIF13 mediates phosphoinositide transport via centaurin alpha1.
Proc.Natl.Acad.Sci.USA, 107, 2010
1DBH
DownloadVisualize
BU of 1dbh by Molmil
DBL AND PLECKSTRIN HOMOLOGY DOMAINS FROM HSOS1
Descriptor: PROTEIN (HUMAN SOS 1)
Authors:Soisson, S.M, Kuriyan, J.
Deposit date:1998-12-17
Release date:1998-12-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the Dbl and pleckstrin homology domains from the human Son of sevenless protein.
Cell(Cambridge,Mass.), 95, 1998
1NTY
DownloadVisualize
BU of 1nty by Molmil
Crystal structure of the first DH/PH domain of Trio to 1.7 A
Descriptor: Triple functional domain protein
Authors:Skowronek, K.R, Zheng, Y, Nassar, N.
Deposit date:2003-01-30
Release date:2004-06-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The C-terminal basic tail of RhoG assists the guanine nucleotide exchange factor trio in binding to phospholipids.
J.Biol.Chem., 279, 2004

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon