PDB: 291 resultsInfo pagesStatus searchChemie searchBIRD

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4FJX	RB69 DNA polymerase ternary complex with dATP/dG Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ... Authors: Xia, S, Wang, J, Konigsberg, W.H. Deposit date: 2012-06-12 Release date: 2012-12-19 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.11 Å) Cite: DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc., 135, 2013
4FLY	Pyrococcus abyssi B family DNA polymerase bound to a dsDNA, in edition mode Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA polymerase 1, MAGNESIUM ION, ... Authors: Gouge, J, Delarue, M. Deposit date: 2012-06-15 Release date: 2012-08-29 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Molecular Recognition of Canonical and Deaminated Bases by P. abyssi Family B DNA Polymerase. J.Mol.Biol., 423, 2012
4I9L	Crystal structure of the D714A mutant of RB69 DNA polymerase Descriptor: CHLORIDE ION, DNA polymerase, GUANOSINE, ... Authors: Jacewicz, A, Trzemecka, A, Guja, K.E, Plochocka, D, Yakubovskaya, E, Bebenek, A, Garcia-Diaz, M. Deposit date: 2012-12-05 Release date: 2013-10-09 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.6 Å) Cite: A Remote Palm Domain Residue of RB69 DNA Polymerase Is Critical for Enzyme Activity and Influences the Conformation of the Active Site. Plos One, 8, 2013
4FJG	RB69 DNA polymerase ternary complex with dATP/dC Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ... Authors: Xia, S, Wang, J, Konigsberg, W.H. Deposit date: 2012-06-11 Release date: 2012-12-19 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.02 Å) Cite: DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc., 135, 2013
4FK0	RB69 DNA polymerase ternary complex with dCTP/dG Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ... Authors: Xia, S, Wang, J, Konigsberg, W.H. Deposit date: 2012-06-12 Release date: 2012-12-19 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.18 Å) Cite: DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc., 135, 2013
4FLX	Pyrococcus abyssi B family DNA polymerase bound to a dsDNA, in edition mode Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA polymerase 1, GLYCEROL, ... Authors: Gouge, J, Delarue, M. Deposit date: 2012-06-15 Release date: 2012-08-29 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Molecular Recognition of Canonical and Deaminated Bases by P. abyssi Family B DNA Polymerase. J.Mol.Biol., 423, 2012
4FJH	RB69 DNA polymerase ternary complex with dGTP/dC Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ... Authors: Xia, S, Wang, J, Konigsberg, W.H. Deposit date: 2012-06-11 Release date: 2012-12-19 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.11 Å) Cite: DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc., 135, 2013
4FLW	Pyrococcus abyssi B family DNA polymerase bound to a dsDNA, in edition mode Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA polymerase 1, GLYCEROL, ... Authors: Gouge, J, Delarue, M. Deposit date: 2012-06-15 Release date: 2012-08-29 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Molecular Recognition of Canonical and Deaminated Bases by P. abyssi Family B DNA Polymerase. J.Mol.Biol., 423, 2012
4FJJ	RB69 DNA polymerase ternary complex with dTTP/dC Descriptor: CALCIUM ION, DNA polymerase, DNA primer, ... Authors: Xia, S, Wang, J, Konigsberg, W.H. Deposit date: 2012-06-11 Release date: 2012-12-19 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.99 Å) Cite: DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc., 135, 2013
4FM2	Pyrococcus abyssi B family DNA polymerase (triple mutant) bound to a dsDNA, in edition mode Descriptor: DNA polymerase 1, GLYCEROL, MAGNESIUM ION, ... Authors: Gouge, J, Delarue, M. Deposit date: 2012-06-15 Release date: 2012-08-29 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Molecular Recognition of Canonical and Deaminated Bases by P. abyssi Family B DNA Polymerase. J.Mol.Biol., 423, 2012
4J2B	RB69 DNA Polymerase L415G Ternary Complex Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*T)-3'), ... Authors: Xia, S, Wang, J, Konigsberg, W.H. Deposit date: 2013-02-04 Release date: 2014-02-19 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.04 Å) Cite: Alteration in the cavity size adjacent to the active site of RB69 DNA polymerase changes its conformational dynamics. Nucleic Acids Res., 41, 2013
4I9Q	Crystal structure of the ternary complex of the D714A mutant of RB69 DNA polymerase Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*C)-3'), ... Authors: Guja, K.E, Jacewicz, A, Trzemecka, A, Plochocka, D, Yakubovskaya, E, Bebenek, A, Garcia-Diaz, M. Deposit date: 2012-12-05 Release date: 2013-10-09 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: A Remote Palm Domain Residue of RB69 DNA Polymerase Is Critical for Enzyme Activity and Influences the Conformation of the Active Site. Plos One, 8, 2013
4J2D	RB69 DNA Polymerase L415K Ternary Complex Descriptor: CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*T)-3'), DNA (5'-D(*TP*CP*GP*AP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3'), ... Authors: Xia, S, Wang, J, Konigsberg, W.H. Deposit date: 2013-02-04 Release date: 2014-02-19 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.76 Å) Cite: Role of L415 in the Replication of RB69 DNA Polymerase To be Published
4J2E	RB69 DNA Polymerase L415M Ternary Complex Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*G)-3'), ... Authors: Xia, S, Wang, J, Konigsberg, W.H. Deposit date: 2013-02-04 Release date: 2014-02-19 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Alteration in the cavity size adjacent to the active site of RB69 DNA polymerase changes its conformational dynamics. Nucleic Acids Res., 41, 2013
4J2A	RB69 DNA Polymerase L415A Ternary Complex Descriptor: CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*C)-3'), DNA (5'-D(*TP*CP*GP*AP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3'), ... Authors: Xia, S, Wang, J, Konigsberg, W.H. Deposit date: 2013-02-04 Release date: 2014-02-19 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Alteration in the cavity size adjacent to the active site of RB69 DNA polymerase changes its conformational dynamics. Nucleic Acids Res., 41, 2013
8XGC	Structure of yeast replisome associated with FACT and histone hexamer, Composite map Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 45, Chromosome segregation in meiosis protein 3, ... Authors: Li, N, Gao, Y, Yu, D, Gao, N, Zhai, Y. Deposit date: 2023-12-15 Release date: 2024-02-14 Last modified: 2024-04-10 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Parental histone transfer caught at the replication fork. Nature, 627, 2024

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