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6LIZ
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BU of 6liz by Molmil
Crystal structure of NDM-1 in complex with D-captopril derivative wss02120
Descriptor: (2R)-1-[(2S)-2-methyl-3-sulfanyl-propanoyl]azepane-2-carboxylic acid, Metallo-beta-lactamase type 2, ZINC ION
Authors:Zhang, H, Ma, G.
Deposit date:2019-12-13
Release date:2020-12-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Structure-guided optimization of D-captopril for discovery of potent NDM-1 inhibitors.
Bioorg.Med.Chem., 29, 2020
6LJ7
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BU of 6lj7 by Molmil
Crystal structure of NDM-1 in complex with D-captopril derivative wss05010
Descriptor: 2-[1-[(2S)-2-methyl-3-sulfanyl-propanoyl]piperidin-4-yl]ethanamide, Metallo-beta-lactamase type 2, ZINC ION
Authors:Zhang, H, Ma, G.
Deposit date:2019-12-13
Release date:2020-12-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Structure-guided optimization of D-captopril for discovery of potent NDM-1 inhibitors.
Bioorg.Med.Chem., 29, 2020
6MDU
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BU of 6mdu by Molmil
Crystal structure of NDM-1 with compound 7
Descriptor: 1,5-diphenyl-N-(1H-tetrazol-5-yl)-1H-pyrazole-3-carboxamide, GLYCEROL, Metallo-beta-lactamase type 2, ...
Authors:Akhtar, A, Chen, Y.
Deposit date:2018-09-05
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Active-Site Druggability of Carbapenemases and Broad-Spectrum Inhibitor Discovery.
Acs Infect Dis., 5, 2019
6MFI
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BU of 6mfi by Molmil
MIM-2 Metallo-Beta-Lactamase
Descriptor: Metallo-beta-lactamase, ZINC ION
Authors:Selleck, C, Guddat, L, Schenk, G, Monteiro Pedroso, M.
Deposit date:2018-09-11
Release date:2019-11-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.839 Å)
Cite:characterization of the B3 MBLs MIM-1 and MIM-2 from environmental microorganisms.
Chemistry, 23, 2017
6MGZ
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BU of 6mgz by Molmil
Crystal Structure of the New Deli Metallo Beta Lactamase Variant 4 from Klebsiella pneumoniae
Descriptor: FORMIC ACID, MAGNESIUM ION, NDM-4, ...
Authors:Kim, Y, Tesar, C, Jedrzejczak, R, Babnigg, G, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-09-16
Release date:2018-10-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.647 Å)
Cite:Crystal Structure of the New Deli Metallo Beta Lactamase Variant 4 from Klebsiella pneumoniae
To Be Published
6MGX
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BU of 6mgx by Molmil
Crystal Structure of the New Deli Metallo Beta Lactamase Variant 6 Klebsiella pneumoniae
Descriptor: Metallo-beta-lactamase, SULFATE ION, ZINC ION
Authors:Kim, Y, Tesar, C, Jedrzejczak, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-09-16
Release date:2018-10-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the New Deli Metallo Beta Lactamase Variant 6 Klebsiella pneumoniae
To Be Published
6N9R
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BU of 6n9r by Molmil
Structure of the Quorum Quenching lactonase from Parageobacillus caldoxylosilyticus bound to substrate 3-oxo-C12-AHL
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, COBALT (II) ION, ...
Authors:Bergonzi, C, Schwab, M, Elias, M.
Deposit date:2018-12-03
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The Structural Determinants Accounting for the Broad Substrate Specificity of the Quorum Quenching Lactonase GcL.
Chembiochem, 20, 2019
6MGY
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BU of 6mgy by Molmil
Crystal Structure of the New Deli Metallo Beta Lactamase Variant 5 from Klebsiella pneumoniae
Descriptor: GLYCEROL, Metallo-beta-lactamase NDM-5, POTASSIUM ION, ...
Authors:Kim, Y, Tesar, C, Jedrzejczak, R, Babnigg, G, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-09-16
Release date:2018-10-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of the New Deli Metallo Beta Lactamase Variant 5 from Klebsiella pneumoniae
To Be Published
6N9I
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Structure of the Quorum Quenching lactonase from Parageobacillus caldoxylosilyticus - free
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, COBALT (II) ION, ...
Authors:Bergonzi, C, Schwab, M, Elias, M.
Deposit date:2018-12-03
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Structural Determinants Accounting for the Broad Substrate Specificity of the Quorum Quenching Lactonase GcL.
Chembiochem, 20, 2019
6MH0
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BU of 6mh0 by Molmil
Crystal Structure of the New Deli Metallo Beta Lactamase Variant 3 from Klebsiella pneumoniae
Descriptor: CHLORIDE ION, Metallo-beta-lactamase NDM-3, SULFATE ION, ...
Authors:Kim, Y, Tesar, C, Jedrzejczak, R, Babnigg, G, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-09-16
Release date:2018-10-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal Structure of the New Deli Metallo Beta Lactamase Variant 3 from Klebsiella pneumoniae
To Be Published
6N9Q
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Structure of the Quorum Quenching lactonase from Parageobacillus caldoxylosilyticus bind to substrate C4-AHL
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, COBALT (II) ION, ...
Authors:Bergonzi, C, Schwab, M, Elias, M.
Deposit date:2018-12-03
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The Structural Determinants Accounting for the Broad Substrate Specificity of the Quorum Quenching Lactonase GcL.
Chembiochem, 20, 2019
6O3R
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BU of 6o3r by Molmil
Crystal Structure of NDM-1 D199N with Compound 7
Descriptor: Carbapenem Hydrolyzing Class B Metallo beta lactamase NDM-1, ZINC ION, [(5-methoxy-7-methyl-2-oxo-2H-1-benzopyran-4-yl)methyl]phosphonic acid
Authors:Akhtar, A, Chen, Y.
Deposit date:2019-02-27
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases.
J.Med.Chem., 62, 2019
6NY7
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BU of 6ny7 by Molmil
Crystal Structure of NDM-1 D199N with Compound 16
Descriptor: Carbapenem Hydrolyzing Class B Metallo beta lactamase NDM-1, ZINC ION, [(5,7-dibromo-2-oxo-1,2-dihydroquinolin-4-yl)methyl]phosphonic acid
Authors:Akhtar, A, Chen, Y.
Deposit date:2019-02-11
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases.
J.Med.Chem., 62, 2019
6OP6
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BU of 6op6 by Molmil
Structure of VIM-20 in the reduced state
Descriptor: Metallo-beta-lactamase VIM-20, SODIUM ION, ZINC ION
Authors:Page, R.C, Shurina, B.A, Montgomery, J.S, Orischak, M.G, Nix, J.C.
Deposit date:2019-04-24
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:A Single Salt Bridge in VIM-20 Increases Protein Stability and Antibiotic Resistance under Low-Zinc Conditions.
Mbio, 10, 2019
5U8O
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BU of 5u8o by Molmil
Crystal Structure of Beta-lactamase domain protein, from Burkholderia multivorans
Descriptor: CALCIUM ION, CHLORIDE ION, UNKNOWN ATOM OR ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2016-12-14
Release date:2017-01-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Beta-lactamase domain protein, from Burkholderia multivorans
to be published
1QH5
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BU of 1qh5 by Molmil
HUMAN GLYOXALASE II WITH S-(N-HYDROXY-N-BROMOPHENYLCARBAMOYL)GLUTATHIONE
Descriptor: GLUTATHIONE, PROTEIN (HYDROXYACYLGLUTATHIONE HYDROLASE), S-(N-HYDROXY-N-BROMOPHENYLCARBAMOYL)GLUTATHIONE, ...
Authors:Cameron, A.D, Ridderstrom, M, Olin, B, Mannervik, B.
Deposit date:1999-05-11
Release date:1999-09-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of human glyoxalase II and its complex with a glutathione thiolester substrate analogue.
Structure Fold.Des., 7, 1999
1QH3
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BU of 1qh3 by Molmil
HUMAN GLYOXALASE II WITH CACODYLATE AND ACETATE IONS PRESENT IN THE ACTIVE SITE
Descriptor: ACETATE ION, CACODYLATE ION, CHLORIDE ION, ...
Authors:Cameron, A.D, Ridderstrom, M, Olin, B, Mannervik, B.
Deposit date:1999-05-10
Release date:1999-09-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of human glyoxalase II and its complex with a glutathione thiolester substrate analogue.
Structure Fold.Des., 7, 1999
8CGL
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BU of 8cgl by Molmil
Cryo-EM structure of RNase J from Helicobacter pylori
Descriptor: Ribonuclease J
Authors:Lulla, A, Luisi, B.F.
Deposit date:2023-02-05
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Acetylation regulates the oligomerization state and activity of RNase J, the Helicobacter pylori major ribonuclease.
Nat Commun, 14, 2023
8EWO
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BU of 8ewo by Molmil
Crystal structure of putative glyoxylase II from Pseudomonas aeruginosa
Descriptor: CHLORIDE ION, GLYCEROL, PA1813, ...
Authors:Stogios, P.J, Skarina, T, Endres, M, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2022-10-24
Release date:2022-11-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Crystal structure of putative glyoxylase II from Pseudomonas aeruginosa
To Be Published
7PCR
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BU of 7pcr by Molmil
Helicobacter pylori RNase J
Descriptor: Ribonuclease J
Authors:Luisi, B.F, Pei, X.Y.
Deposit date:2021-08-03
Release date:2022-05-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Acetylation regulates the oligomerization state and activity of RNase J, the Helicobacter pylori major ribonuclease.
Nat Commun, 14, 2023
6I1D
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BU of 6i1d by Molmil
Structure of the Ysh1-Mpe1 nuclease complex from S.cerevisiae
Descriptor: Endoribonuclease YSH1, GLYCEROL, Protein MPE1, ...
Authors:Hill, C.H, Boreikaite, V, Kumar, A, Casanal, A, Kubik, P, Degliesposti, G, Maslen, S, Mariani, A, von Loeffelholz, O, Girbig, M, Skehel, M, Passmore, L.A.
Deposit date:2018-10-28
Release date:2019-02-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Activation of the Endonuclease that Defines mRNA 3' Ends Requires Incorporation into an 8-Subunit Core Cleavage and Polyadenylation Factor Complex.
Mol.Cell, 73, 2019
4XWW
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BU of 4xww by Molmil
Crystal structure of RNase J complexed with RNA
Descriptor: DR2417, GLYCEROL, MANGANESE (II) ION, ...
Authors:Lu, M, Zhang, H, Xu, Q, Hua, Y, Zhao, Y.
Deposit date:2015-01-29
Release date:2015-12-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into catalysis and dimerization enhanced exonuclease activity of RNase J
Nucleic Acids Res., 43, 2015
6RZ0
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BU of 6rz0 by Molmil
Crystal structure of Escherichia coli Glyoxalase II
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, CHLORIDE ION, GLYCEROL, ...
Authors:Skorupskaite, A, McDonough, M.A, Schofield, C.J.
Deposit date:2019-06-12
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure of Escherichia coli Glyoxalase II
To Be Published
1XM8
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BU of 1xm8 by Molmil
X-RAY STRUCTURE OF GLYOXALASE II FROM ARABIDOPSIS THALIANA GENE AT2G31350
Descriptor: ACETIC ACID, DI(HYDROXYETHYL)ETHER, FE (III) ION, ...
Authors:Wesenberg, G.E, Smith, D.W, Phillips Jr, G.N, Bitto, E, Bingman, C.A, Allard, S.T.M, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2004-10-01
Release date:2004-10-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural studies on a mitochondrial glyoxalase II.
J.Biol.Chem., 280, 2005
4NUR
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BU of 4nur by Molmil
Crystal structure of thermostable alkylsulfatase SdsAP from Pseudomonas sp. S9
Descriptor: MAGNESIUM ION, PSdsA, ZINC ION
Authors:Sun, L.F, Su, Y.T, Zhao, Y.H, Cai, Z.X, Wu, Y.
Deposit date:2013-12-04
Release date:2014-12-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.761 Å)
Cite:Crystal structure of thermostable alkylsulfatase SdsAP from Pseudomonas sp. S9
To be Published

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