Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6AS9
DownloadVisualize
BU of 6as9 by Molmil
Filamentous Assembly of Green Fluorescent Protein Supported by a C-terminal fusion of 18-residues, viewed in space group P212121 form 2
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, Green fluorescent protein
Authors:Sawaya, M.R, Heller, D.M, McPartland, L, Hochschild, A, Eisenberg, D.S.
Deposit date:2017-08-23
Release date:2018-05-30
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Atomic insights into the genesis of cellular filaments by globular proteins.
Nat. Struct. Mol. Biol., 25, 2018
3I19
DownloadVisualize
BU of 3i19 by Molmil
1.4 Angstrom Crystal Structure of Fluorescent Protein Cypet
Descriptor: Green fluorescent protein
Authors:Hu, X.
Deposit date:2009-06-25
Release date:2010-06-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:1.4 Angstrom Crystal Structure of Fluorescent Protein Cypet
To be Published
6B9C
DownloadVisualize
BU of 6b9c by Molmil
Superfolder Green Fluorescent Protein with 4-nitro-L-phenylalanine at the chromophore (position 66)
Descriptor: CARBON DIOXIDE, Green fluorescent protein
Authors:Phillips-Piro, C.M, Brewer, S.H, Olenginski, G.M, Piacentini, J.
Deposit date:2017-10-10
Release date:2018-10-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Structural and spectrophotometric investigation of two unnatural amino-acid altered chromophores in the superfolder green fluorescent protein
Acta Crystallogr.,Sect.D, 2021
6B7R
DownloadVisualize
BU of 6b7r by Molmil
Truncated strand 11-less green fluorescent protein
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Green fluorescent protein
Authors:Deng, A, Boxer, S.G.
Deposit date:2017-10-05
Release date:2017-12-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural Insight into the Photochemistry of Split Green Fluorescent Proteins: A Unique Role for a His-Tag.
J. Am. Chem. Soc., 140, 2018
3IP2
DownloadVisualize
BU of 3ip2 by Molmil
Crystal structure of red fluorescent protein Neptune at pH 7.0
Descriptor: Neptune red fluorescent protein
Authors:Lin, M.Z, McKeown, M.R, Ng, H.L, Aguilera, T.A, Shaner, N.C, Ma, W, Adams, S.R, Campbell, R.E, Alber, T, Tsien, R.Y.
Deposit date:2009-08-15
Release date:2009-12-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Autofluorescent proteins with excitation in the optical window for intravital imaging in mammals.
Chem.Biol., 16, 2009
3IR8
DownloadVisualize
BU of 3ir8 by Molmil
Red fluorescent protein mKeima at pH 7.0
Descriptor: Large stokes shift fluorescent protein
Authors:Henderson, J.N, Osborn, M.F, Koon, N, Gepshtein, R, Huppert, D, Remington, S.J.
Deposit date:2009-08-21
Release date:2009-09-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Excited state proton transfer in the red fluorescent protein mKeima.
J.Am.Chem.Soc., 131, 2009
6CIU
DownloadVisualize
BU of 6ciu by Molmil
Structure of a Thr-rich interface in an Azami Green tetramer
Descriptor: Azami-Green
Authors:Oi, C, Lim, C.S, Knecht, K.M, Xiong, Y, Regan, L.
Deposit date:2018-02-25
Release date:2018-09-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A threonine zipper that mediates protein-protein interactions: Structure and prediction.
Protein Sci., 27, 2018
6D39
DownloadVisualize
BU of 6d39 by Molmil
Photodissociable dimeric Dronpa green fluorescent protein variant V (pdDronpaV)
Descriptor: Fluorescent protein Dronpa, SULFATE ION
Authors:Zhou, X, Fan, L, Lin, M.
Deposit date:2018-04-15
Release date:2018-05-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Optical control of cell signaling by single-chain photoswitchable kinases.
Science, 355, 2017
3K1K
DownloadVisualize
BU of 3k1k by Molmil
Green fluorescent protein bound to enhancer nanobody
Descriptor: Enhancer, Green Fluorescent Protein
Authors:Kirchhofer, A, Helma, J, Schmidthals, K, Frauer, C, Cui, S, Karcher, A, Pellis, M, Muyldermans, S, Delucci, C.C, Cardoso, M.C, Leonhardt, H, Hopfner, K.-P, Rothbauer, U.
Deposit date:2009-09-28
Release date:2009-12-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Modulation of protein properties in living cells using nanobodies
Nat.Struct.Mol.Biol., 17, 2010
3KCS
DownloadVisualize
BU of 3kcs by Molmil
Crystal structure of PAmCherry1 in the dark state
Descriptor: PAmCherry1 protein
Authors:Malashkevich, V.N, Subach, F.V, Zencheck, W.D, Xiao, H, Filonov, G.S, Almo, S.C, Verkhusha, V.V.
Deposit date:2009-10-21
Release date:2009-11-17
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Photoactivation mechanism of PAmCherry based on crystal structures of the protein in the dark and fluorescent states.
Proc.Natl.Acad.Sci.USA, 106, 2009
6D38
DownloadVisualize
BU of 6d38 by Molmil
Photodissociable dimeric Dronpa green fluorescent protein variant M (pdDronpaM)
Descriptor: Fluorescent protein Dronpa, SULFATE ION
Authors:Zhou, X, Fan, L, Lin, M.
Deposit date:2018-04-14
Release date:2018-05-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Optical control of cell signaling by single-chain photoswitchable kinases.
Science, 355, 2017
3KCT
DownloadVisualize
BU of 3kct by Molmil
CRYSTAL STRUCTURE OF PAmCherry1 in the photoactivated state
Descriptor: PAmCherry1 protein
Authors:Malashkevich, V.N, Subach, F.V, Zencheck, W.D, Xiao, H, Filonov, G.S, Almo, S.C, Verkhusha, V.V.
Deposit date:2009-10-21
Release date:2009-11-17
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Photoactivation mechanism of PAmCherry based on crystal structures of the protein in the dark and fluorescent states.
Proc.Natl.Acad.Sci.USA, 106, 2009
6DQ1
DownloadVisualize
BU of 6dq1 by Molmil
sfGFP N149 mutated to 4-nitro-L-phenylalanine
Descriptor: SODIUM ION, sfGFP
Authors:Phillips-Piro, C.M, Savidge, N, Lee, B.
Deposit date:2018-06-10
Release date:2018-10-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.598 Å)
Cite:Crystal structures of green fluorescent protein with the unnatural amino acid 4-nitro-L-phenylalanine.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6DEJ
DownloadVisualize
BU of 6dej by Molmil
The structure of HcRed7, a brighter and red-shifted HcRed variant
Descriptor: CHLORIDE ION, DODECAETHYLENE GLYCOL, GFP-like non-fluorescent chromoprotein, ...
Authors:Wannier, T.M, Mayo, S.L.
Deposit date:2018-05-12
Release date:2018-05-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6279 Å)
Cite:Monomerization of far-red fluorescent proteins.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6DQ0
DownloadVisualize
BU of 6dq0 by Molmil
sfGFP D133 mutated to 4-nitro-L-phenylalanine
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, superfolder green fluorescent protein
Authors:Phillips-Piro, C.M, Maurici, N, Lee, B.
Deposit date:2018-06-10
Release date:2018-10-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.048 Å)
Cite:Crystal structures of green fluorescent protein with the unnatural amino acid 4-nitro-L-phenylalanine.
Acta Crystallogr F Struct Biol Commun, 74, 2018
3LA1
DownloadVisualize
BU of 3la1 by Molmil
High resolution crystal structure of CyPet mutant A167I
Descriptor: Green fluorescent protein, SODIUM ION
Authors:Hu, X.
Deposit date:2010-01-06
Release date:2011-01-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Crystal Structure of CyPet
To be Published
3LF4
DownloadVisualize
BU of 3lf4 by Molmil
Crystal Structure of Fluorescent Timer Precursor Blue102
Descriptor: Fluorescent Timer Precursor Blue102
Authors:Pletnev, S, Dauter, Z.
Deposit date:2010-01-15
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.808 Å)
Cite:Understanding blue-to-red conversion in monomeric fluorescent timers and hydrolytic degradation of their chromophores
J.Am.Chem.Soc., 132, 2010
3LVD
DownloadVisualize
BU of 3lvd by Molmil
Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). UV-photoconverted green form.
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.751 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
3LF3
DownloadVisualize
BU of 3lf3 by Molmil
Crystal Structure of Fast Fluorescent Timer Fast-FT
Descriptor: Fast Fluorescent Timer Fast-FT
Authors:Pletnev, S, Dauter, Z.
Deposit date:2010-01-15
Release date:2010-03-09
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Understanding blue-to-red conversion in monomeric fluorescent timers and hydrolytic degradation of their chromophores
J.Am.Chem.Soc., 132, 2010
6EFR
DownloadVisualize
BU of 6efr by Molmil
Crystal Structure of iNicSnFR 1.0
Descriptor: iNicSnFR 1.0, a genetically encoded nicotine biosensor,Green fluorescent protein
Authors:Shivange, A.V, Borden, P.M.
Deposit date:2018-08-17
Release date:2019-01-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Nicotinic Drugs in the Endoplasmic Reticulum: Beginning the Inside-out Pathway of Addiction and Therapy
J.Gen.Physiol., 2019
3LVC
DownloadVisualize
BU of 3lvc by Molmil
Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). Colorless form.
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
3LVA
DownloadVisualize
BU of 3lva by Molmil
Crystal structure of colorless GFP-like protein from Aequorea coerulescens
Descriptor: GLYCEROL, Green fluorescent protein, SULFATE ION
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
3MGF
DownloadVisualize
BU of 3mgf by Molmil
Crystal Structure of Monomeric Kusabira-Orange (MKO), Orange-Emitting GFP-like Protein, at pH 7.5
Descriptor: Fluorescent protein
Authors:Ebisawa, T, Yamamura, A, Ohtsuka, J, Kameda, Y, Hayakawa, K, Nagata, K, Tanokura, M.
Deposit date:2010-04-06
Release date:2011-03-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Monomeric Kusabira-Orange (MKO), Orange-Emitting GFP-like Protein, at pH 7.5
To be Published
8YDO
DownloadVisualize
BU of 8ydo by Molmil
Crystal structure of dKeima570
Descriptor: Large stokes shift fluorescent protein
Authors:Nam, K.H.
Deposit date:2024-02-21
Release date:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of dKeima570
To Be Published
8UBG
DownloadVisualize
BU of 8ubg by Molmil
DpHF19 filament
Descriptor: DpHF19,Green fluorescent protein (Fragment)
Authors:Lynch, E.M, Shen, H, Kollman, J.M, Baker, D.
Deposit date:2023-09-22
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:De novo design of pH-responsive self-assembling helical protein filaments.
Nat Nanotechnol, 2024

220472

PDB entries from 2024-05-29

PDB statisticsPDBj update infoContact PDBjnumon