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PDB: 11 results

7D55
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BU of 7d55 by Molmil
Crystal structure of lys170 CBD
Descriptor: Putative N-acetylmuramoyl-L-alanine amidase
Authors:Zhen, X.
Deposit date:2020-09-25
Release date:2021-06-09
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.397 Å)
Cite:Structural and biochemical analyses of the tetrameric cell binding domain of Lys170 from enterococcal phage F170/08.
Eur.Biophys.J., 50, 2021
7XUX
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BU of 7xux by Molmil
Crystal structure of a FIC domain containnig protein
Descriptor: Fido domain-containing protein
Authors:Zhen, X, Ouyang, S.
Deposit date:2022-05-20
Release date:2022-12-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:A secreted effector with a dual role as a toxin and as a transcriptional factor.
Nat Commun, 13, 2022
7W54
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BU of 7w54 by Molmil
Crystal structure of a bacterial OTU DUB with Ub-PA
Descriptor: Lpg2248, Polyubiquitin-B, prop-2-en-1-amine
Authors:Zhen, X, Ouyang, S.Y.
Deposit date:2021-11-29
Release date:2022-08-24
Last modified:2023-04-05
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structural basis for the dual catalytic activity of the Legionella pneumophila ovarian tumor (OTU) domain deubiquitinase LotA.
J.Biol.Chem., 298, 2022
7VKC
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BU of 7vkc by Molmil
Crystal structure of a bacterial Ser/Thr kinase
Descriptor: HipA_C domain-containing protein
Authors:Zhen, X, Ouyang, S.Y.
Deposit date:2021-09-29
Release date:2022-06-29
Last modified:2022-08-03
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Molecular mechanism of toxin neutralization in the HipBST toxin-antitoxin system of Legionella pneumophila.
Nat Commun, 13, 2022
7VKB
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BU of 7vkb by Molmil
Crystal structure of the a bacterial kinase complex
Descriptor: DI(HYDROXYETHYL)ETHER, HipA (Persistence to inhibition of murein or DNA biosynthesis), HipA_C domain-containing protein, ...
Authors:Zhen, X, Ouyang, S.Y.
Deposit date:2021-09-29
Release date:2022-06-29
Last modified:2022-08-03
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Molecular mechanism of toxin neutralization in the HipBST toxin-antitoxin system of Legionella pneumophila.
Nat Commun, 13, 2022
8IFO
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BU of 8ifo by Molmil
Crystal structure of estrogen related receptor-gamma DNA binding domain complexed with Pla2g12b promoter
Descriptor: DNA (5'-D(*GP*AP*GP*GP*AP*CP*AP*AP*AP*GP*GP*TP*GP*AP*AP*AP*C)-3'), DNA (5'-D(*GP*TP*TP*TP*CP*AP*CP*CP*TP*TP*TP*GP*TP*CP*CP*TP*C)-3'), Estrogen-related receptor gamma, ...
Authors:Xu, T, Zhen, X, Liu, J.
Deposit date:2023-02-19
Release date:2023-03-29
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:ERR gamma-DBD undergoes dimerization and conformational rearrangement upon binding to the downstream site of the DR1 element.
Biochem.Biophys.Res.Commun., 656, 2023
5H5P
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BU of 5h5p by Molmil
Crystal structure of Myelin-gene Regulatory Factor DNA binding domain
Descriptor: Myelin regulatory factor
Authors:Shi, N, Zhen, X, Li, B.
Deposit date:2016-11-09
Release date:2017-06-28
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.461 Å)
Cite:Crystal structure of the DNA-binding domain of Myelin-gene Regulatory Factor.
Sci Rep, 7, 2017
6IPX
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BU of 6ipx by Molmil
Crystal structure of the apo form transcription factor
Descriptor: AimR transcriptional regulator
Authors:Oy, S.Y, Zhen, X, Zhou, H, Ding, W.
Deposit date:2018-11-05
Release date:2019-01-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.634 Å)
Cite:Structural basis of AimP signaling molecule recognition by AimR in Spbeta group of bacteriophages.
Protein Cell, 10, 2019
8JL0
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BU of 8jl0 by Molmil
Cryo-EM structure of the prokaryotic SPARSA system complex
Descriptor: DNA (5'-D(P*AP*CP*GP*AP*CP*GP*TP*CP*TP*AP*AP*GP*AP*AP*AP*CP*CP*AP*TP*TP*AP*T)-3'), NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Piwi domain protein, ...
Authors:Xu, X, Zhen, X, Long, F.
Deposit date:2023-06-02
Release date:2024-01-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of antiphage immunity generated by a prokaryotic Argonaute-associated SPARSA system.
Nat Commun, 15, 2024
8JKZ
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BU of 8jkz by Molmil
Cryo-EM structure of the prokaryotic SPARSA system complex
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Piwi domain protein, Sir2 superfamily protein
Authors:Xu, X, Zhen, X, Long, F.
Deposit date:2023-06-02
Release date:2024-01-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis of antiphage immunity generated by a prokaryotic Argonaute-associated SPARSA system.
Nat Commun, 15, 2024
7WCF
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BU of 7wcf by Molmil
Crystal structure of the kinase with AMP-PNP
Descriptor: HipA_C domain-containing protein, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
Authors:Ouyang, S.Y, Zhen, X.
Deposit date:2021-12-20
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.3636 Å)
Cite:Molecular mechanism of toxin neutralization in the HipBST toxin-antitoxin system of Legionella pneumophila.
Nat Commun, 13, 2022

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