PDB Search results for query - Protein Data Bank Japan

PDB: 48 results

Solution Structure of the Zn-loaded form of a Metallothionein from Helix Pomatia
Descriptor:	Cadmium-metallothionein, ZINC ION
Authors:	Zerbe, O, Jurt, S, Beil, A.
Deposit date:	2019-01-28
Release date:	2019-12-18
Last modified:	2023-06-14
Method:	SOLUTION NMR
Cite:	The Solution Structure and Dynamics of Cd-Metallothionein fromHelix pomatiaReveal Optimization for Binding Cd over Zn. Biochemistry, 58, 2019

6QK6

Solution Structure of the Cd-loaded form of a Metallothionein from Helix Pomatia
Descriptor:	CADMIUM ION, Cadmium-metallothionein
Authors:	Zerbe, O, Jurt, S, Beil, A.
Deposit date:	2019-01-28
Release date:	2019-12-18
Last modified:	2023-06-14
Method:	SOLUTION NMR
Cite:	The Solution Structure and Dynamics of Cd-Metallothionein fromHelix pomatiaReveal Optimization for Binding Cd over Zn. Biochemistry, 58, 2019

5OMZ

Solution structure of domain III (DIII)of Zika virus Envelope protein
Descriptor:	Envelope Protein
Authors:	Zerbe, O, Bardelli, M.
Deposit date:	2017-08-02
Release date:	2017-10-04
Last modified:	2023-06-14
Method:	SOLUTION NMR
Cite:	A Human Bi-specific Antibody against Zika Virus with High Therapeutic Potential. Cell, 171, 2017

5MN3

NMR structure of the Littorina littorea metallothionein, a snail MT folding into three distinct domains
Descriptor:	CADMIUM ION, domain-swapped metallothionein from Littorina Littorea
Authors:	Zerbe, O, Jurt, S, Baumann, C.
Deposit date:	2016-12-12
Release date:	2017-12-20
Last modified:	2023-06-14
Method:	SOLUTION NMR
Cite:	Structural Adaptation of a Protein to Increased Metal Stress: NMR Structure of a Marine Snail Metallothionein with an Additional Domain. Angew.Chem.Int.Ed.Engl., 56, 2017

2RU5

Designed Armadillo Repeat Protein Fragment (MAII)
Descriptor:	Armadillo repeat protein C-terminal fragment
Authors:	Zerbe, O, Christen, M.T, Plueckthun, A, Watson, R.P.
Deposit date:	2013-11-23
Release date:	2014-07-23
Last modified:	2024-05-15
Method:	SOLUTION NMR
Cite:	Spontaneous self-assembly of engineered armadillo repeat protein fragments into a folded structure Structure, 22, 2014

2RU4

Designed Armadillo Repeat Protein Self-ASsembled Complex (YIIM2-MAII)
Descriptor:	Armadillo Repeat Protein, C-terminal fragment, MAII, ...
Authors:	Zerbe, O, Christen, M.T, Plueckthun, A, Watson, R.P.
Deposit date:	2013-11-22
Release date:	2014-07-23
Last modified:	2024-05-15
Method:	SOLUTION NMR
Cite:	Spontaneous self-assembly of engineered armadillo repeat protein fragments into a folded structure Structure, 22, 2014

2OON

Structure of Ala14-PYY in aqueous solution
Descriptor:	Peptide YY
Authors:	Zerbe, O, Neumoin, A, Mares, J.
Deposit date:	2007-01-26
Release date:	2007-12-25
Last modified:	2023-12-27
Method:	SOLUTION NMR
Cite:	Probing the formation of stable tertiary structure in a model miniprotein at atomic resolution: determinants of stability of a helical hairpin. J.Am.Chem.Soc., 129, 2007

2OOP

Structure of Tyr7-PYY in solution
Descriptor:	Peptide YY
Authors:	Zerbe, O, Neumoin, A, Mares, J.
Deposit date:	2007-01-26
Release date:	2007-12-25
Last modified:	2023-12-27
Method:	SOLUTION NMR
Cite:	Probing the formation of stable tertiary structure in a model miniprotein at atomic resolution: determinants of stability of a helical hairpin. J.Am.Chem.Soc., 129, 2007

1F8P

PORCINE NEUROPEPTIDE Y BOUND TO DPC MICELLES
Descriptor:	NEUROPEPTIDE Y (PNPY)
Authors:	Bader, R, Beck-Sickinger, A.G, Zerbe, O.
Deposit date:	2000-07-03
Release date:	2001-01-03
Last modified:	2022-02-23
Method:	SOLUTION NMR
Cite:	Structure and dynamics of micelle-bound neuropeptide Y: comparison with unligated NPY and implications for receptor selection. J.Mol.Biol., 305, 2001

8ONU

Solution structure of thanatin analogue 7 in complex with LptAm(Ab)1.0
Descriptor:	Lipopolysaccharide export system protein LptA, Thanatin-like derivative
Authors:	Oi, K.K, Moehle, K, Zerbe, O.
Deposit date:	2023-04-04
Release date:	2023-06-14
Last modified:	2023-11-29
Method:	SOLUTION NMR
Cite:	Early Molecular Insights into Thanatin Analogues Binding to A. baumannii LptA. Molecules, 28, 2023

8OH7

Structure of A4M4C bound to (KR)4 Solution backbone structure refined by PCS
Descriptor:	Designed Armadillo repeat protein with four internal modules
Authors:	Cucuzza, S, Zerbe, O.
Deposit date:	2023-03-20
Release date:	2023-12-13
Method:	SOLUTION NMR
Cite:	Unexpected dynamics in femtomolar complexes of binding proteins with peptides. Nat Commun, 14, 2023

6GW8

Zn(II) form of shortened metallothionein from Pseudomonas fluorescens Q2-87 (residues 1-52)
Descriptor:	ZINC ION, metallothionein
Authors:	Habjanic, J, Zerbe, O, Freisinger, E.
Deposit date:	2018-06-22
Release date:	2018-09-19
Last modified:	2023-06-14
Method:	SOLUTION NMR
Cite:	A histidine-rich Pseudomonas metallothionein with a disordered tail displays higher binding capacity for cadmium than zinc. Metallomics, 10, 2018

5ML1

NMR Structure of the Littorina littorea metallothionein, a snail MT folding into three distinct domains
Descriptor:	CADMIUM ION, Putative metallothionein
Authors:	Baumann, C, Beil, A, Jurt, S, Zerbe, O.
Deposit date:	2016-12-06
Release date:	2017-04-12
Last modified:	2023-06-14
Method:	SOLUTION NMR
Cite:	Structural Adaptation of a Protein to Increased Metal Stress: NMR Structure of a Marine Snail Metallothionein with an Additional Domain. Angew. Chem. Int. Ed. Engl., 56, 2017

1ERY

PHEROMONE ER-11, NMR
Descriptor:	PHEROMONE ER-11
Authors:	Luginbuhl, P, Wu, J, Zerbe, O, Ortenzi, C, Luporini, P, Wuthrich, K.
Deposit date:	1996-03-22
Release date:	1996-08-17
Last modified:	2022-02-16
Method:	SOLUTION NMR
Cite:	The NMR solution structure of the pheromone Er-11 from the ciliated protozoan Euplotes raikovi. Protein Sci., 5, 1996

7QS6

Solution structure of thanatin-like derivative 7 in complex with E.coli LptA
Descriptor:	Lipopolysaccharide export system protein LptA, Thanatin-like derivative
Authors:	Moehle, K, Zerbe, O.
Deposit date:	2022-01-12
Release date:	2023-05-10
Last modified:	2023-11-15
Method:	SOLUTION NMR
Cite:	Peptidomimetic antibiotics disrupt the lipopolysaccharide transport bridge of drug-resistant Enterobacteriaceae. Sci Adv, 9, 2023

7R0R

Solution structure of the designed Armadillo repeat protein N(A4)M4C(AII) refined by pseudocontact shifts
Descriptor:	Designed Armadillo Repeat Protein N(A4)M4C(AII)
Authors:	Cucuzza, S, Zerbe, O.
Deposit date:	2022-02-02
Release date:	2022-06-22
Last modified:	2023-01-25
Method:	SOLUTION NMR
Cite:	Improved Repeat Protein Stability by Combined Consensus and Computational Protein Design. Biochemistry, 62, 2023

7ZAX

Solution structure of thanatin-like derivative 7 in complex with K. pneumoniae LptA
Descriptor:	Lipopolysaccharide export system protein LptA, Thanatin-like derivative
Authors:	Oi, K.K, Moehle, K, Zerbe, O.
Deposit date:	2022-03-22
Release date:	2023-06-07
Last modified:	2023-11-15
Method:	SOLUTION NMR
Cite:	Peptidomimetic antibiotics disrupt the lipopolysaccharide transport bridge of drug-resistant Enterobacteriaceae. Sci Adv, 9, 2023

7ZED

Solution structure of thanatin-like derivative 7 in complex with E.coli LptA mutant Q62L
Descriptor:	Lipopolysaccharide export system protein LptA, Thanatin-like derivative
Authors:	Moehle, K, Zerbe, O.
Deposit date:	2022-03-31
Release date:	2023-06-07
Last modified:	2023-11-15
Method:	SOLUTION NMR
Cite:	Peptidomimetic antibiotics disrupt the lipopolysaccharide transport bridge of drug-resistant Enterobacteriaceae. Sci Adv, 9, 2023

1FVN

[ALA31, AIB32]-NEUROPEPTIDE Y
Descriptor:	NEUROPEPTIDE Y
Authors:	Bader, R, Zerbe, O, Beck-Sickinger, A.G.
Deposit date:	2000-09-20
Release date:	2000-10-04
Last modified:	2021-11-03
Method:	SOLUTION NMR
Cite:	The first selective agonist for the neuropeptide YY5 receptor increases food intake in rats. J.Biol.Chem., 275, 2000

1HD6

PHEROMONE ER-22, NMR
Descriptor:	PHEROMONE ER-22
Authors:	Luginbuhl, P, Liu, A, Zerbe, O, Ortenzi, C, Luporini, P, Wuthrich, K.
Deposit date:	2000-11-09
Release date:	2000-12-10
Last modified:	2011-07-13
Method:	SOLUTION NMR
Cite:	NMR Structure of the Pheromone Er-22 from Euplotes Raikovi J.Biomol.NMR, 19, 2001

8BSS

Solution Structure of thanatin-like derivative 5 in complex with E. coli LptA mutant Q62L
Descriptor:	Lipopolysaccharide export system protein LptA, Thanatin-like derivative
Authors:	Oi, K.K, Jurt, S, Moehle, K, Zerbe, O.
Deposit date:	2022-11-26
Release date:	2023-06-07
Last modified:	2023-11-15
Method:	SOLUTION NMR
Cite:	Peptidomimetic antibiotics disrupt the lipopolysaccharide transport bridge of drug-resistant Enterobacteriaceae. Sci Adv, 9, 2023

1OCA

HUMAN CYCLOPHILIN A, UNLIGATED, NMR, 20 STRUCTURES
Descriptor:	CYCLOPHILIN A
Authors:	Ottiger, M, Zerbe, O, Guntert, P, Wuthrich, K.
Deposit date:	1997-07-07
Release date:	1997-11-19
Last modified:	2024-05-22
Method:	SOLUTION NMR
Cite:	The NMR solution conformation of unligated human cyclophilin A. J.Mol.Biol., 272, 1997

1RU5

Solution structure of porcine peptide YY (pPYY)
Descriptor:	Peptide YY
Authors:	Lerch, M, Mayrhofer, M, Zerbe, O.
Deposit date:	2003-12-11
Release date:	2004-06-08
Last modified:	2022-03-02
Method:	SOLUTION NMR
Cite:	Structural similarities of micelle-bound peptide YY (PYY) and neuropeptide Y (NPY) are related to their affinity profiles at the Y receptors. J.Mol.Biol., 339, 2004

2N8X

Solution structure of LptE from Pseudomonas Aerigunosa
Descriptor:	LPS-assembly lipoprotein LptE
Authors:	Moehle, K, Kocherla, H, Jurt, S, Robinson, J, Zerbe, O, Zerbe, K, Bacsa, B.
Deposit date:	2015-10-28
Release date:	2016-05-25
Last modified:	2024-05-01
Method:	SOLUTION NMR
Cite:	Solution Structure and Dynamics of LptE from Pseudomonas aeruginosa. Biochemistry, 55, 2016

1ICY

[ALA31,PRO32]-PNPY BOUND TO DPC MICELLES
Descriptor:	NEUROPEPTIDE Y
Authors:	Bader, R, Rytz, G, Lerch, M, Beck-Sickinger, A.G, Zerbe, O.
Deposit date:	2001-04-02
Release date:	2002-05-08
Last modified:	2021-10-27
Method:	SOLUTION NMR
Cite:	Key motif to gain selectivity at the neuropeptide Y5-receptor: structure and dynamics of micelle-bound [Ala31, Pro32]-NPY. Biochemistry, 41, 2002

12 >

Total results:	48
Displayed results:	25
Sorted by:	Hit score (from highest)
Deposition authors:	"Zerbe, O."