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PDB: 46 results

6AGT
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BU of 6agt by Molmil
Crystal structure of PfKRS complexed with chromone inhibitor
Descriptor: COBALT (II) ION, FORMIC ACID, LYSINE, ...
Authors:Yogavel, M, Sharma, A, Sharma, A, Baragana, B, Walpole, C.
Deposit date:2018-08-14
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.953 Å)
Cite:Lysyl-tRNA synthetase as a drug target in malaria and cryptosporidiosis.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
4MZC
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BU of 4mzc by Molmil
Atomic Resolution Structure of PfGrx1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Glutaredoxin
Authors:Yogavel, M, Sharma, A.
Deposit date:2013-09-30
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.949 Å)
Cite:Atomic resolution crystal structure of glutaredoxin 1 from Plasmodium falciparum and comparison with other glutaredoxins.
Acta Crystallogr.,Sect.D, 70, 2014
4MZB
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BU of 4mzb by Molmil
Crystal structure of Grx1 from Plasmodium falciparum
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Glutaredoxin
Authors:Yogavel, M, Sharma, A.
Deposit date:2013-09-30
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.038 Å)
Cite:Atomic resolution crystal structure of glutaredoxin 1 from Plasmodium falciparum and comparison with other glutaredoxins.
Acta Crystallogr.,Sect.D, 70, 2014
4N10
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BU of 4n10 by Molmil
Crystal structure of plasmodium falciparum oxidized glutaredoxin 1 (PfGrx1) complexed with cisplatin
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Cisplatin, ...
Authors:Yogavel, M, Sharma, A.
Deposit date:2013-10-03
Release date:2014-10-08
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Interaction of Cisplatin with plasmodium falciparum Glutaredoxin 1
To be Published
4N11
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BU of 4n11 by Molmil
Crystal structure of plasmodium falciparum reduced glutaredoxin 1 (PfGrx1) complexed with cisplatin
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Cisplatin, ...
Authors:Yogavel, M, Sharma, A.
Deposit date:2013-10-03
Release date:2014-10-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Interaction of Cisplatin with plasmodium falciparum Glutaredoxin 1
To be Published
4N0Z
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BU of 4n0z by Molmil
Crystal structure of cisplatin bound to a plasmodium falciparum glutaredoxin 1 (PfGrx1)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Cisplatin, ...
Authors:Yogavel, M, Sharma, A.
Deposit date:2013-10-03
Release date:2014-10-08
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Interaction of Cisplatin with plasmodium falciparum Glutaredoxin 1
To be Published
7VC1
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BU of 7vc1 by Molmil
Toxoplasma gondii Prolyl-tRNA Synthetase (TgPRS) in Complex with inhibitor L95 and L-proline in space group P21
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Yogavel, M, Malhotra, N, Sharma, A.
Deposit date:2021-09-01
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.892 Å)
Cite:Targeting prolyl-tRNA synthetase via a series of ATP-mimetics to accelerate drug discovery against toxoplasmosis.
Plos Pathog., 19, 2023
7VC2
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BU of 7vc2 by Molmil
Toxoplasma gondii Prolyl-tRNA Synthetase (TgPRS) in Complex with inhibitor L96 and L-proline in space group P21
Descriptor: 1,2-ETHANEDIOL, 4-[(3S)-3-cyano-3-cyclopropyl-2-oxidanylidene-pyrrolidin-1-yl]-N-[[3-fluoranyl-5-(5-methoxypyridin-3-yl)phenyl]methyl]-6-methyl-pyridine-2-carboxamide, CHLORIDE ION, ...
Authors:Yogavel, M, Malhotra, N, Sharma, A.
Deposit date:2021-09-01
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.096 Å)
Cite:Targeting prolyl-tRNA synthetase via a series of ATP-mimetics to accelerate drug discovery against toxoplasmosis.
Plos Pathog., 19, 2023
3GYV
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BU of 3gyv by Molmil
Crystal structure of nucleosome assembly protein from Plasmodium falciparum
Descriptor: IODIDE ION, Nucleosome assembly protein 1, putative
Authors:Yogavel, M, Gill, J, Sharma, A.
Deposit date:2009-04-06
Release date:2009-05-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Iodide-SAD, SIR and SIRAS phasing for structure solution of a nucleosome assembly protein.
Acta Crystallogr.,Sect.D, 65, 2009
3GYW
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BU of 3gyw by Molmil
Crystal structure of nucleosome assembly protein from Plasmodium falciparum at 2.4 A resolution
Descriptor: Nucleosome assembly protein 1, putative
Authors:Yogavel, M, Gill, J, Sharma, A.
Deposit date:2009-04-06
Release date:2009-05-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Iodide-SAD, SIR and SIRAS phasing for structure solution of a nucleosome assembly protein.
Acta Crystallogr.,Sect.D, 65, 2009
4TWA
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BU of 4twa by Molmil
Crystal Structure of Prolyl-tRNA Synthetase (PRS) from Plasmodium falciparum
Descriptor: CHLORIDE ION, Proline--tRNA ligase, SULFATE ION
Authors:Jain, V, Yogavel, M, Sharma, A.
Deposit date:2014-06-30
Release date:2014-08-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and functional analysis of the anti-malarial drug target prolyl-tRNA synthetase.
J. Struct. Funct. Genomics, 15, 2014
6AA0
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BU of 6aa0 by Molmil
Crystal Structure of Toxoplasma gondii Prolyl tRNA Synthetase (TgPRS) in Apo Form
Descriptor: GLYCEROL, Prolyl-tRNA synthetase (ProRS)
Authors:Mishra, S, Kumari, S, Sharma, A, Yogavel, M.
Deposit date:2018-07-16
Release date:2019-10-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Conformational heterogeneity in apo and drug-bound structures of Toxoplasma gondii prolyl-tRNA synthetase.
Acta Crystallogr.,Sect.F, 75, 2019
2IRP
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BU of 2irp by Molmil
Crystal structure of the l-fuculose-1-phosphate aldolase (aq_1979) from aquifex aeolicus VF5
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, Putative aldolase class 2 protein aq_1979
Authors:Jeyakanthan, J, Gayathri, D, Yogavel, M, Velmurugan, D, Baba, S, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-16
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the l-fuculose-1-phosphate aldolase (aq_1979) from aquifex aeolicus VF5
To be Published
3FS3
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BU of 3fs3 by Molmil
Crystal structure of malaria parasite Nucleosome Assembly Protein (NAP)
Descriptor: Nucleosome assembly protein 1, putative
Authors:Gill, J, Yogavel, M, Kumar, A, Belrhali, H, Sharma, A.
Deposit date:2009-01-09
Release date:2009-01-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of malaria parasite nucleosome assembly protein: distinct modes of protein localization and histone recognition.
J.Biol.Chem., 284, 2009
5HGQ
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BU of 5hgq by Molmil
Loa loa Lysyl-tRNA synthetase in complex with Cladosporin.
Descriptor: GLYCEROL, LYSINE, Lysine--tRNA ligase, ...
Authors:Sharma, A, Sharma, M, Yogavel, M, Sharma, A.
Deposit date:2016-01-08
Release date:2016-10-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.283 Å)
Cite:Protein Translation Enzyme lysyl-tRNA Synthetase Presents a New Target for Drug Development against Causative Agents of Loiasis and Schistosomiasis
PLoS Negl Trop Dis, 10, 2016
4LJM
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BU of 4ljm by Molmil
Crystal structure of C-terminal RNA recognition motif of human ETR3
Descriptor: CUGBP Elav-like family member 2
Authors:Kashyap, M, Sharma, A, Yogavel, M, Bhavesh, N.S.
Deposit date:2013-07-05
Release date:2014-07-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of C-terminal RNA recognition motif of human ETR3
To be Published
2BAX
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BU of 2bax by Molmil
Atomic Resolution Structure of the Double Mutant (K53,56M) of Bovine Pancreatic Phospholipase A2
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ...
Authors:Sekar, K, Yogavel, M, Velmurugan, D, Dauter, Z, Dauter, M, Tsai, M.D.
Deposit date:2005-10-15
Release date:2005-10-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Atomic resolution (0.97 A) structure of the triple mutant (K53,56,121M) of bovine pancreatic phospholipase A2.
Acta Crystallogr.,Sect.F, 61, 2005
3B2I
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BU of 3b2i by Molmil
Iodide derivative of human LFABP
Descriptor: Fatty acid-binding protein, liver, IODIDE ION, ...
Authors:Sharma, A, Yogavel, M, Sharma, A.
Deposit date:2011-08-03
Release date:2012-07-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Utility of anion and cation combinations for phasing of protein structures.
J.Struct.Funct.Genom., 13, 2012
3B2J
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BU of 3b2j by Molmil
Iodide derivative of human LFABP
Descriptor: Fatty acid-binding protein, liver, IODIDE ION, ...
Authors:Sharma, A, Yogavel, M, Sharma, A.
Deposit date:2011-08-03
Release date:2012-06-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Utility of anion and cation combinations for phasing of protein structures.
J.Struct.Funct.Genom., 13, 2012
2OGW
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BU of 2ogw by Molmil
Structure of ABC type zinc transporter from E. coli
Descriptor: High-affinity zinc uptake system protein znuA precursor, ZINC ION
Authors:Sharma, A, Yogavel, M.
Deposit date:2007-01-09
Release date:2007-03-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural Analysis of ABC-family Periplasmic Zinc Binding Protein Provides New Insights Into Mechanism of Ligand Uptake and Release
J.Mol.Biol., 367, 2007
2VWA
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BU of 2vwa by Molmil
Crystal structure of a sporozoite protein essential for liver stage development of malaria parasite
Descriptor: PHOSPHATIDYLETHANOLAMINE, PUTATIVE UNCHARACTERIZED PROTEIN PF13_0012
Authors:Sharma, A, Sharma, A, Yogavel, M, Gill, J, Akhouri, R.R.
Deposit date:2008-06-20
Release date:2008-07-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Soluble Domain of Malaria Sporozoite Protein Uis3 in Complex with Lipid.
J.Biol.Chem., 283, 2008
3B2K
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BU of 3b2k by Molmil
Iodide derivative of human LFABP
Descriptor: Fatty acid-binding protein, liver, IODIDE ION, ...
Authors:Sharma, A, Yogavel, M, Sharma, A.
Deposit date:2011-08-03
Release date:2012-06-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Utility of anion and cation combinations for phasing of protein structures.
J.Struct.Funct.Genom., 13, 2012
3B2H
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BU of 3b2h by Molmil
Iodide derivative of human LFABP at high resolution
Descriptor: Fatty acid-binding protein, liver, IODIDE ION, ...
Authors:Sharma, A, Yogavel, M, Sharma, A.
Deposit date:2011-08-03
Release date:2012-06-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Utility of anion and cation combinations for phasing of protein structures.
J.Struct.Funct.Genom., 13, 2012
3B2L
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BU of 3b2l by Molmil
Iodide derivative of human LFABP
Descriptor: Fatty acid-binding protein, liver, IODIDE ION, ...
Authors:Sharma, A, Yogavel, M, Sharma, A.
Deposit date:2011-08-03
Release date:2012-06-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Utility of anion and cation combinations for phasing of protein structures.
J.Struct.Funct.Genom., 13, 2012
4YDQ
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BU of 4ydq by Molmil
Crystal Structure of Prolyl-tRNA Synthetase (PRS) from Plasmodium falciparum in complex with Halofuginone and AMPPNP
Descriptor: 7-bromo-6-chloro-3-{3-[(2R,3S)-3-hydroxypiperidin-2-yl]-2-oxopropyl}quinazolin-4(3H)-one, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Jain, V, Yogavel, M, Sharma, A.
Deposit date:2015-02-23
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of Prolyl-tRNA Synthetase-Halofuginone Complex Provides Basis for Development of Drugs against Malaria and Toxoplasmosis
Structure, 23, 2015

 

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