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PDB: 29 results

3ZIX
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Clostridium perfringens Enterotoxin with the N-terminal 37 residues deleted
Descriptor: HEAT-LABILE ENTEROTOXIN B CHAIN, HEXAETHYLENE GLYCOL
Authors:Yelland, T, Naylor, C.E, Savva, C.G, Basak, A.K.
Deposit date:2013-01-14
Release date:2014-01-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a C. Perfringens Enterotoxin Mutant in Complex with a Modified Claudin-2 Extracellular Loop 2
J.Mol.Biol., 426, 2014
3ZIW
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BU of 3ziw by Molmil
Clostridium perfringens enterotoxin, D48A mutation and N-terminal 37 residues deleted
Descriptor: HEAT-LABILE ENTEROTOXIN B CHAIN, HEXAETHYLENE GLYCOL
Authors:Yelland, T, Naylor, C.E, Savva, C.G, Basak, A.K.
Deposit date:2013-01-14
Release date:2014-01-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a C. Perfringens Enterotoxin Mutant in Complex with a Modified Claudin-2 Extracellular Loop 2
J.Mol.Biol., 426, 2014
7AJK
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BU of 7ajk by Molmil
Crystal structure of CRYI-B Rac1 complex
Descriptor: CYFIP-related Rac1 interactor B, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Yelland, T, Anh, L, Insall, R, Machesky, L, Ismail, S.
Deposit date:2020-09-29
Release date:2020-11-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Basis of CYRI-B Direct Competition with Scar/WAVE Complex for Rac1.
Structure, 29, 2021
7AJL
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BU of 7ajl by Molmil
Cyrstal structure of CYRI-B/Fam49B
Descriptor: CYFIP-related Rac1 interactor B
Authors:Yelland, T, Anh, H, Insall, R, Machesky, L, Ismail, S.
Deposit date:2020-09-29
Release date:2020-11-18
Last modified:2021-06-02
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Structural Basis of CYRI-B Direct Competition with Scar/WAVE Complex for Rac1.
Structure, 29, 2021
6FMF
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BU of 6fmf by Molmil
Neuropilin-1 b1 domain in complex with EG01377; 2.8 Angstrom structure
Descriptor: (2~{S})-2-[[3-[[5-[4-(aminomethyl)phenyl]-1-benzofuran-7-yl]sulfonylamino]thiophen-2-yl]carbonylamino]-5-carbamimidamido-pentanoic acid, Neuropilin-1, trifluoroacetic acid
Authors:Yelland, T, Djordjevic, S, Selwood, D, Zachary, I, Frankel, P.
Deposit date:2018-01-31
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.811 Å)
Cite:Small Molecule Neuropilin-1 Antagonists Combine Antiangiogenic and Antitumor Activity with Immune Modulation through Reduction of Transforming Growth Factor Beta (TGF beta ) Production in Regulatory T-Cells.
J. Med. Chem., 61, 2018
6FMC
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Neuropilin1-b1 domain in complex with EG01377, 0.9 Angstrom structure
Descriptor: (2~{S})-2-[[3-[[5-[4-(aminomethyl)phenyl]-1-benzofuran-7-yl]sulfonylamino]thiophen-2-yl]carbonylamino]-5-carbamimidamido-pentanoic acid, Neuropilin-1
Authors:Yelland, T, Djordjevic, S, Fotinou, K, Selwood, D, Zachary, I, Frankel, P.
Deposit date:2018-01-30
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Small Molecule Neuropilin-1 Antagonists Combine Antiangiogenic and Antitumor Activity with Immune Modulation through Reduction of Transforming Growth Factor Beta (TGF beta ) Production in Regulatory T-Cells.
J. Med. Chem., 61, 2018
6H6A
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BU of 6h6a by Molmil
Crystal structure of UNC119 in complex with LCK peptide
Descriptor: GLY-CYS-GLY-CYS-SER-SER, GLYCEROL, MYRISTIC ACID, ...
Authors:Yelland, T, ElMaghloob, Y, McIlwraith, M, Stephen, L, Ismail, S.
Deposit date:2018-07-26
Release date:2018-09-26
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Ciliary Machinery Is Repurposed for T Cell Immune Synapse Trafficking of LCK.
Dev.Cell, 47, 2018
7OK7
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BU of 7ok7 by Molmil
Crystal structure of the UNC119B ARL3 complex
Descriptor: 1,2-ETHANEDIOL, ADP-ribosylation factor-like protein 3, GLYCEROL, ...
Authors:Yelland, T, Ismail, S.
Deposit date:2021-05-17
Release date:2021-06-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:The Structural and Biochemical Characterization of UNC119B Cargo Binding and Release Mechanisms.
Biochemistry, 60, 2021
7OK6
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BU of 7ok6 by Molmil
Crystal structure of UNC119B in complex with LCK peptide
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, LCK peptide, ...
Authors:Yelland, T, Ismail, S.
Deposit date:2021-05-17
Release date:2021-06-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:The Structural and Biochemical Characterization of UNC119B Cargo Binding and Release Mechanisms.
Biochemistry, 60, 2021
5L73
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BU of 5l73 by Molmil
MAM domain of human neuropilin-1
Descriptor: BICINE, CALCIUM ION, Neuropilin-1, ...
Authors:Yelland, T, Djordjevic, S.
Deposit date:2016-06-01
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal Structure of the Neuropilin-1 MAM Domain: Completing the Neuropilin-1 Ectodomain Picture.
Structure, 24, 2016
7Q9U
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BU of 7q9u by Molmil
Crystal structure of the high affinity KRas mutant PDE6D complex
Descriptor: 1,2-ETHANEDIOL, FARNESYL, GTPase KRas, ...
Authors:Yelland, T, Ismail, I.
Deposit date:2021-11-14
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.238 Å)
Cite:Stabilization of the RAS:PDE6D Complex Is a Novel Strategy to Inhibit RAS Signaling.
J.Med.Chem., 65, 2022
7Q9S
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BU of 7q9s by Molmil
Crystal structure of PDE6D KRas peptide complex with Compound-1
Descriptor: 1,2-ETHANEDIOL, 2-methyl-3-(1~{H}-pyrazol-5-yl)imidazo[1,2-a]pyridine, DIMETHYL SULFOXIDE, ...
Authors:Yelland, T, Ismail, S.
Deposit date:2021-11-14
Release date:2022-01-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Stabilization of the RAS:PDE6D Complex Is a Novel Strategy to Inhibit RAS Signaling.
J.Med.Chem., 65, 2022
7Q9Q
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BU of 7q9q by Molmil
Crystal structure of PDE6D Geranylgeranylated cystein complex
Descriptor: 1,2-ETHANEDIOL, GERAN-8-YL GERAN, O-METHYLCYSTEINE, ...
Authors:Yelland, T, Ismail, S.
Deposit date:2021-11-14
Release date:2022-01-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Stabilization of the RAS:PDE6D Complex Is a Novel Strategy to Inhibit RAS Signaling.
J.Med.Chem., 65, 2022
7Q9R
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BU of 7q9r by Molmil
Cocrystal structure of PDE6D bound to NRAS peptide
Descriptor: 1,2-ETHANEDIOL, FARNESYL, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, ...
Authors:Yelland, T, Ismail, S.
Deposit date:2021-11-14
Release date:2022-01-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Stabilization of the RAS:PDE6D Complex Is a Novel Strategy to Inhibit RAS Signaling.
J.Med.Chem., 65, 2022
7QJK
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BU of 7qjk by Molmil
Crystal structure of PDE6D in complex with Compound-2
Descriptor: 1,2-ETHANEDIOL, N-(phenylmethyl)pyridin-2-amine, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, ...
Authors:Yelland, T, Ismail, S.
Deposit date:2021-12-16
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Stabilization of the RAS:PDE6D Complex Is a Novel Strategy to Inhibit RAS Signaling.
J.Med.Chem., 65, 2022
7QF9
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BU of 7qf9 by Molmil
Crystal structure of PDE6D bound to HRas peptide
Descriptor: 1,2-ETHANEDIOL, FARNESYL, HRas peptide, ...
Authors:Yelland, T, Ismail, I.
Deposit date:2021-12-05
Release date:2022-02-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Stabilization of the RAS:PDE6D Complex Is a Novel Strategy to Inhibit RAS Signaling.
J.Med.Chem., 65, 2022
5JHK
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BU of 5jhk by Molmil
X-ray structure of neuropilin-1 b1 domain complexed with Arg-6 ligand.
Descriptor: N-(benzenecarbonyl)glycyl-L-arginine, Neuropilin-1
Authors:Fotinou, C, Rana, R, Djordjevic, S, Yelland, T.
Deposit date:2016-04-21
Release date:2017-05-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Architecture and hydration of the arginine-binding site of neuropilin-1.
FEBS J., 285, 2018
5J1X
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BU of 5j1x by Molmil
X-ray structure of neuropilin-1 b1 domain complexed with Arg-5 ligand.
Descriptor: DIMETHYL SULFOXIDE, Neuropilin-1, N~2~-(tert-butoxycarbonyl)-L-arginine
Authors:Fotinou, C, Rana, R, Djordjevic, S, Yelland, T.
Deposit date:2016-03-29
Release date:2017-04-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Architecture and hydration of the arginine-binding site of neuropilin-1.
FEBS J., 285, 2018
7ZC8
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BU of 7zc8 by Molmil
Crystal structure of the C-terminal domain of FusB, a TonB homologue
Descriptor: Protein TonB
Authors:Wojnowska, M, Walker, D, Yelland, T.
Deposit date:2022-03-25
Release date:2022-08-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Crystal structure of the C-terminal domain of FusB, a TonB homologue
To Be Published
4P5H
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BU of 4p5h by Molmil
Structure of Clostridium perfringens Enterotoxin with a peptide derived from a modified version of ECL-2 of Claudin 2
Descriptor: Claudin-2, Heat-labile enterotoxin B chain
Authors:Naylor, C.E, Yelland, T.S, Basak, A.K.
Deposit date:2014-03-17
Release date:2014-07-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:Structure of a C. perfringens Enterotoxin Mutant in Complex with a Modified Claudin-2 Extracellular Loop 2.
J.Mol.Biol., 426, 2014
7P5U
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BU of 7p5u by Molmil
Neuropilin-b1 in a complex with a VEGFB-derived peptide
Descriptor: MGC0122, Neuropilin-1
Authors:Fotinou, C, Rhana, R, Yelland, T.
Deposit date:2021-07-14
Release date:2022-07-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Neuropilin-b1 in a complex with a VEGFB-derived peptide
To Be Published
4RN5
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BU of 4rn5 by Molmil
B1 domain of human Neuropilin-1 with acetate ion in a ligand-binding site
Descriptor: ACETATE ION, GLYCEROL, Neuropilin-1, ...
Authors:Allerston, C.K, Yelland, T.S, Jarvis, A, Jenkins, K, Winfield, N, Cheng, L, Jia, H, Zachary, I, Selwood, D.L, Djordjevic, S.
Deposit date:2014-10-23
Release date:2015-10-28
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Conserved water molecules in a ligand-binding site of neuropilin-1
To be Published
5IJR
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BU of 5ijr by Molmil
X-ray structure of neuropilin-1 b1 domain complexed with Arg-1 ligand.
Descriptor: DIMETHYL SULFOXIDE, L-HOMOARGININE, Neuropilin-1
Authors:Fotinou, C, Rana, R, Djordjevic, S, Yelland, T.
Deposit date:2016-03-02
Release date:2017-03-29
Last modified:2018-07-11
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Architecture and hydration of the arginine-binding site of neuropilin-1.
FEBS J., 285, 2018
5IYY
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BU of 5iyy by Molmil
X-ray structure of neuropilin-1 b1 domain complexed with Arg-4 ligand.
Descriptor: Neuropilin-1, N~2~-[(benzyloxy)carbonyl]-L-arginine
Authors:Fotinou, C, Rana, R, Djordjevic, S, Yelland, T.
Deposit date:2016-03-24
Release date:2017-04-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Architecture and hydration of the arginine-binding site of neuropilin-1.
FEBS J., 285, 2018
5JGQ
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BU of 5jgq by Molmil
X-ray structure of neuropilin-1 b1 domain complexed with Arg-7 ligand.
Descriptor: DIMETHYL SULFOXIDE, Neuropilin-1, N~2~-(benzenecarbonyl)-L-arginine
Authors:Fotinou, C, Rana, R, Djordjevic, S, Yelland, T.
Deposit date:2016-04-20
Release date:2017-05-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Architecture and hydration of the arginine-binding site of neuropilin-1.
FEBS J., 285, 2018

 

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