1SQJ
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![BU of 1sqj by Molmil](/molmil-images/mine/1sqj) | Crystal Structure Analysis of Oligoxyloglucan reducing-end-specific cellobiohydrolase (OXG-RCBH) | Descriptor: | oligoxyloglucan reducing-end-specific cellobiohydrolase | Authors: | Yaoi, K, Kondo, H, Noro, N, Suzuki, M, Tsuda, S, Mitsuishi, Y. | Deposit date: | 2004-03-19 | Release date: | 2004-07-20 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Tandem Repeat of a Seven-Bladed beta-Propeller Domain in Oligoxyloglucan Reducing-End-Specific Cellobiohydrolase Structure, 12, 2004
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2EBS
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![BU of 2ebs by Molmil](/molmil-images/mine/2ebs) | Crystal Structure Anaalysis of Oligoxyloglucan reducing-end-specific cellobiohydrolase (OXG-RCBH) D465N Mutant Complexed with a Xyloglucan Heptasaccharide | Descriptor: | Oligoxyloglucan reducing end-specific cellobiohydrolase, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose | Authors: | Yaoi, K, Kondo, H, Hiyoshi, A, Noro, N, Sugimoto, H, Miyazaki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2007-02-09 | Release date: | 2007-06-26 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | The Structural Basis for the Exo-mode of Action in GH74 Oligoxyloglucan Reducing End-specific Cellobiohydrolase. J.Mol.Biol., 370, 2007
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3A0F
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![BU of 3a0f by Molmil](/molmil-images/mine/3a0f) | The crystal structure of Geotrichum sp. M128 xyloglucanase | Descriptor: | Xyloglucanase | Authors: | Yaoi, K, Kondo, H, Hiyoshi, A, Noro, N, Sugimoto, H, Tsuda, S, Miyazaki, K. | Deposit date: | 2009-03-16 | Release date: | 2009-09-08 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | The crystal structure of a xyloglucan-specific endo-beta-1,4-glucanase from Geotrichum sp. M128 xyloglucanase reveals a key amino acid residue for substrate specificity Febs J., 276, 2009
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5YQS
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![BU of 5yqs by Molmil](/molmil-images/mine/5yqs) | Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... | Authors: | Yaoi, K, Matsuzawa, T, Watanabe, M, Nakamichi, Y. | Deposit date: | 2017-11-07 | Release date: | 2018-11-14 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Crystal structure and substrate recognition mechanism of Aspergillus oryzae isoprimeverose-producing enzyme. J.Struct.Biol., 205, 2019
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5AYB
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![BU of 5ayb by Molmil](/molmil-images/mine/5ayb) | Crystal structure of GH1 Beta-Glucosidase TD2F2 N223G mutant | Descriptor: | 1,2-ETHANEDIOL, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, BETA-GLUCOSIDASE, ... | Authors: | Jo, T, Manninen, J.A, Matsuzawa, T, Uchiyama, T, Yaoi, K, Arakawa, T, Fushinobu, S. | Deposit date: | 2015-08-12 | Release date: | 2016-04-27 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic beta-glucosidase Td2F2 Febs J., 283, 2016
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5AYI
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![BU of 5ayi by Molmil](/molmil-images/mine/5ayi) | Crystal structure of GH1 Beta-glucosidase TD2F2 N223Q mutant | Descriptor: | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, BETA-GLUCOSIDASE, GLYCEROL, ... | Authors: | Jo, T, Manninen, J.A, Matsuzawa, T, Uchiyama, T, Yaoi, K, Arakawa, T, Fushinobu, S. | Deposit date: | 2015-08-21 | Release date: | 2016-04-27 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic beta-glucosidase Td2F2 Febs J., 283, 2016
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7EAP
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![BU of 7eap by Molmil](/molmil-images/mine/7eap) | Crystal structure of IpeA-XXXG complex | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... | Authors: | Matsuzawa, T, Watanabe, M, Nakamichi, Y, Akita, H, Yaoi, K. | Deposit date: | 2021-03-08 | Release date: | 2022-03-16 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.42 Å) | Cite: | Structural basis for the catalytic mechanism of the glycoside hydrolase family 3 isoprimeverose-producing oligoxyloglucan hydrolase from Aspergillus oryzae. Febs Lett., 596, 2022
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5XGZ
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![BU of 5xgz by Molmil](/molmil-images/mine/5xgz) | Metagenomic glucose-tolerant glycosidase | Descriptor: | Beta-glycosidase, GLYCEROL, NICKEL (II) ION, ... | Authors: | Watanabe, M, Matsuzawa, T, Yaoi, K. | Deposit date: | 2017-04-19 | Release date: | 2018-05-02 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Improved thermostability of a metagenomic glucose-tolerant beta-glycosidase based on its X-ray crystal structure. Appl.Microbiol.Biotechnol., 101, 2017
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3WH6
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![BU of 3wh6 by Molmil](/molmil-images/mine/3wh6) | Crystal structure of GH1 beta-glucosidase Td2F2 glucose complex | Descriptor: | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, SODIUM ION, alpha-D-glucopyranose, ... | Authors: | Jo, T, Fushinobu, S, Uchiyama, T, Yaoi, K. | Deposit date: | 2013-08-21 | Release date: | 2014-09-03 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic beta-glucosidase Td2F2. Febs J., 283, 2016
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3WH7
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![BU of 3wh7 by Molmil](/molmil-images/mine/3wh7) | Crystal structure of GH1 beta-glucosidase Td2F2 L-fucose complex | Descriptor: | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, SODIUM ION, beta-D-fucopyranose, ... | Authors: | Jo, T, Fushinobu, S, Uchiyama, T, Yaoi, K. | Deposit date: | 2013-08-21 | Release date: | 2014-09-03 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.1 Å) | Cite: | Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic beta-glucosidase Td2F2. Febs J., 283, 2016
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3WH8
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![BU of 3wh8 by Molmil](/molmil-images/mine/3wh8) | Crystal structure of GH1 beta-glucosidase Td2F2 isofagomine complex | Descriptor: | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, GLYCEROL, ... | Authors: | Jo, T, Fushinobu, S, Uchiyama, T, Yaoi, K. | Deposit date: | 2013-08-21 | Release date: | 2014-09-03 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic beta-glucosidase Td2F2. Febs J., 283, 2016
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3WH5
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![BU of 3wh5 by Molmil](/molmil-images/mine/3wh5) | Crystal structure of GH1 beta-glucosidase Td2F2 | Descriptor: | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, GLYCEROL, SODIUM ION, ... | Authors: | Jo, T, Fushinobu, S, Uchiyama, T, Yaoi, K. | Deposit date: | 2013-08-21 | Release date: | 2014-09-03 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic beta-glucosidase Td2F2. Febs J., 283, 2016
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5GLQ
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![BU of 5glq by Molmil](/molmil-images/mine/5glq) | Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compostmicrobial metagenome in complex with l-arabinose and xylotriose, calcium-free form | Descriptor: | Glycoside hydrolase family 43, SODIUM ION, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, ... | Authors: | Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K. | Deposit date: | 2016-07-12 | Release date: | 2017-03-15 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium. J. Biochem., 162, 2017
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5GLR
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![BU of 5glr by Molmil](/molmil-images/mine/5glr) | Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compostmicrobial metagenome in complex with l-arabinose and xylotriose, calcium-bound form | Descriptor: | CALCIUM ION, Glycoside hydrolase family 43, SODIUM ION, ... | Authors: | Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K. | Deposit date: | 2016-07-12 | Release date: | 2017-03-15 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium. J. Biochem., 162, 2017
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5GLL
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![BU of 5gll by Molmil](/molmil-images/mine/5gll) | Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compostmicrobial metagenome, calcium-bound form | Descriptor: | ACETATE ION, CALCIUM ION, GLYCEROL, ... | Authors: | Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K. | Deposit date: | 2016-07-12 | Release date: | 2017-03-15 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium. J. Biochem., 162, 2017
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5GLN
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![BU of 5gln by Molmil](/molmil-images/mine/5gln) | Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compostmicrobial metagenome in complex with xylotriose, calcium-bound form | Descriptor: | ACETATE ION, CALCIUM ION, Glycoside hydrolase family 43, ... | Authors: | Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K. | Deposit date: | 2016-07-12 | Release date: | 2017-03-15 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium. J. Biochem., 162, 2017
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5GLM
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![BU of 5glm by Molmil](/molmil-images/mine/5glm) | Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compost microbial metagenome in complex with xylotriose, calcium-free form. | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, Glycoside hydrolase family 43, ... | Authors: | Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K. | Deposit date: | 2016-07-12 | Release date: | 2017-03-15 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium. J. Biochem., 162, 2017
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5GLP
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![BU of 5glp by Molmil](/molmil-images/mine/5glp) | Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compostmicrobial metagenome in complex with l-arabinose, calcium-bound form | Descriptor: | ACETATE ION, CALCIUM ION, Glycoside hydrolase family 43, ... | Authors: | Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K. | Deposit date: | 2016-07-12 | Release date: | 2017-03-15 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium. J. Biochem., 162, 2017
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5YOT
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![BU of 5yot by Molmil](/molmil-images/mine/5yot) | Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... | Authors: | Matsuzawa, T, Watanabe, M, Nakamichi, Y, Yaoi, K. | Deposit date: | 2017-10-31 | Release date: | 2018-11-07 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (1.98 Å) | Cite: | Crystal structure and substrate recognition mechanism of Aspergillus oryzae isoprimeverose-producing enzyme. J.Struct.Biol., 205, 2019
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5ZN6
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![BU of 5zn6 by Molmil](/molmil-images/mine/5zn6) | |
5ZN7
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![BU of 5zn7 by Molmil](/molmil-images/mine/5zn7) | |
5GLK
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![BU of 5glk by Molmil](/molmil-images/mine/5glk) | Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compost microbial metagenome, calcium-free form. | Descriptor: | ACETATE ION, GLYCEROL, Glycoside hydrolase family 43, ... | Authors: | Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K. | Deposit date: | 2016-07-12 | Release date: | 2017-03-15 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium. J. Biochem., 162, 2017
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5GLO
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![BU of 5glo by Molmil](/molmil-images/mine/5glo) | Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compostmicrobial metagenome in complex with l-arabinose, calcium-free form | Descriptor: | ACETATE ION, Glycoside hydrolase family 43, SODIUM ION, ... | Authors: | Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K. | Deposit date: | 2016-07-12 | Release date: | 2017-03-15 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium. J. Biochem., 162, 2017
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7WDN
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![BU of 7wdn by Molmil](/molmil-images/mine/7wdn) | Crystal structures of MeBglD2 in complex with various saccharides | Descriptor: | alpha-D-glucopyranose, beta-glucosidase | Authors: | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | Deposit date: | 2021-12-22 | Release date: | 2023-01-04 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides. Appl.Microbiol.Biotechnol., 106, 2022
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7WDO
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![BU of 7wdo by Molmil](/molmil-images/mine/7wdo) | Crystal structures of MeBglD2 in complex with various saccharides | Descriptor: | Beta-glucosidase, SULFATE ION, beta-D-glucopyranose, ... | Authors: | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | Deposit date: | 2021-12-22 | Release date: | 2022-11-02 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.21 Å) | Cite: | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022
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