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PDB: 461 results

2JO7
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Solution structure of the adhesion protein Bd37 from Babesia divergens
Descriptor: Glycosylphosphatidylinositol-anchored merozoite surface protein
Authors:Auguin, D, Yang, Y, Lohr, F, Arold, S, Schetters, T, Precigout, E, Gorenflot, A, Delbecq, S, Roumestand, C.
Deposit date:2007-02-26
Release date:2007-12-11
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:The Solution Structure of the Adhesion Protein Bd37 from Babesia divergens Reveals Structural Homology with Eukaryotic Proteins Involved in Membrane Trafficking
J.Mol.Biol., 375, 2007
8K5K
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The structure of SenA
Descriptor: FE (III) ION, GLYCEROL, selenoneine synthase SenA
Authors:Liu, M, Yang, Y, Huang, J.-W, Chen, C.-C, Guo, R.-T.
Deposit date:2023-07-21
Release date:2023-12-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural insights into a novel nonheme iron-dependent oxygenase in selenoneine biosynthesis.
Int.J.Biol.Macromol., 256, 2023
8K5J
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The structure of SenA in complex with N,N,N-trimethyl-histidine
Descriptor: FE (III) ION, GLYCEROL, N,N,N-trimethyl-histidine, ...
Authors:Liu, M, Yang, Y, Huang, J.-W, Chen, C.-C, Guo, R.-T.
Deposit date:2023-07-21
Release date:2023-12-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural insights into a novel nonheme iron-dependent oxygenase in selenoneine biosynthesis.
Int.J.Biol.Macromol., 256, 2023
2KZA
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Solution structure of ASIP(80-132, P103A, P105A, Q115Y, S124Y)
Descriptor: Agouti-signaling protein
Authors:Patel, M.P, Cribb Fabersunne, C.S, Yang, Y, Kaelin, C.B, Barsh, G.S, Millhauser, G.L.
Deposit date:2010-06-14
Release date:2010-07-21
Last modified:2020-02-05
Method:SOLUTION NMR
Cite:Loop-swapped chimeras of the agouti-related protein and the agouti signaling protein identify contacts required for melanocortin 1 receptor selectivity and antagonism.
J.Mol.Biol., 404, 2010
2L1J
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1H assignments for ASIP(93-126, P103A, P105A, P111A, Q115Y, S124Y)
Descriptor: Agouti-signaling protein
Authors:Patel, M.P, Cribb Fabersunne, C.S, Yang, Y, Kaelin, C.B, Barsh, G.S, Millhauser, G.L.
Deposit date:2010-07-28
Release date:2010-09-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Loop-swapped chimeras of the agouti-related protein and the agouti signaling protein identify contacts required for melanocortin 1 receptor selectivity and antagonism.
J.Mol.Biol., 404, 2010
6KI6
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BU of 6ki6 by Molmil
Crystal structure of BCL11A in complex with gamma-globin -115 HPFH region
Descriptor: B-cell lymphoma/leukemia 11A, DNA (5'-D(*AP*TP*AP*TP*TP*GP*GP*TP*CP*AP*AP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*TP*TP*GP*AP*CP*CP*AP*AP*TP*A)-3'), ...
Authors:Li, F.D, Yang, Y, Shi, Y.Y.
Deposit date:2019-07-17
Release date:2019-09-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into the recognition of gamma-globin gene promoter by BCL11A.
Cell Res., 29, 2019
5XS3
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BU of 5xs3 by Molmil
Crystal structure of HLA Class I antigen
Descriptor: Heavy Chain, Light Chain, P
Authors:Wei, P.C, Yang, Y, Liu, Z.X, Luo, Z.Q, Tu, W.Y, Han, J.Y, Deng, Y.H, Yin, L.
Deposit date:2017-06-12
Release date:2017-09-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Characterization of Autoantigen Presentation by HLA-C*06:02 in Psoriasis
J. Invest. Dermatol., 137, 2017
7EW9
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GDP-bound KRAS G12D in complex with TH-Z816
Descriptor: 7-(8-methylnaphthalen-1-yl)-4-[(2~{R})-2-methylpiperazin-1-yl]-2-[[(2~{S})-1-methylpyrrolidin-2-yl]methoxy]-6,8-dihydro-5~{H}-pyrido[3,4-d]pyrimidine, GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, ...
Authors:Shen, P, Yang, Y, Yang, Y, Zhang, L, Chen, C.-C, Guo, R.-T.
Deposit date:2021-05-25
Release date:2021-12-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:KRAS(G12D) can be targeted by potent inhibitors via formation of salt bridge.
Cell Discov, 8, 2022
7EWB
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GDP-bound KRAS G12D in complex with TH-Z835
Descriptor: 4-[(1~{S},5~{R})-3,8-diazabicyclo[3.2.1]octan-3-yl]-7-(8-methylnaphthalen-1-yl)-2-[[(2~{S})-1-methylpyrrolidin-2-yl]methoxy]-6,8-dihydro-5~{H}-pyrido[3,4-d]pyrimidine, GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, ...
Authors:Shen, P, Yang, Y, Yang, Y, Zhang, L, Chen, C.-C, Guo, R.-T.
Deposit date:2021-05-25
Release date:2021-12-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:KRAS(G12D) can be targeted by potent inhibitors via formation of salt bridge.
Cell Discov, 8, 2022
7EWA
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GDP-bound KRAS G12D in complex with TH-Z827
Descriptor: 4-[(1~{R},5~{S})-3,8-diazabicyclo[3.2.1]octan-8-yl]-7-(8-methylnaphthalen-1-yl)-2-[[(2~{S})-1-methylpyrrolidin-2-yl]methoxy]-6,8-dihydro-5~{H}-pyrido[3,4-d]pyrimidine, GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, ...
Authors:Shen, P, Yang, Y, Yang, Y, Zhang, L, Chen, C.-C, Guo, R.-T.
Deposit date:2021-05-25
Release date:2021-12-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:KRAS(G12D) can be targeted by potent inhibitors via formation of salt bridge.
Cell Discov, 8, 2022
2LFI
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BU of 2lfi by Molmil
Solution NMR structure of a MucBP domain (fragment 187-294) of the protein LBA1460 from Lactobacillus acidophilus, Northeast structural genomics consortium target LaR80A
Descriptor: Protein LBA1460
Authors:Feldmann, E.A, Ramelot, T.A, Yang, Y, Lee, H, Ciccosanti, C, Janjua, H, Nair, R, Acton, T.B, Xiao, R, Everett, J.K, Prestegard, J.H, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-06-30
Release date:2012-02-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution NMR structure of a MucBP domain (fragment 187-294) of the protein LBA1460 from Lactobacillus acidophilus, Northeast structural genomics consortium target LaR80A
To be Published
2LCU
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BU of 2lcu by Molmil
NMR structure of BC28.1
Descriptor: Bc28.1
Authors:Roumestand, C, Delbecq, S, Yang, Y.
Deposit date:2011-05-09
Release date:2012-02-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural and Functional Characterization of Bc28.1, Major Erythrocyte-binding Protein from Babesia canis Merozoite Surface.
J.Biol.Chem., 287, 2012
7FIP
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The native structure of beta-1,2-mannobiose phosphorylase from Thermoanaerobacter sp.
Descriptor: Beta-1,2-mannobiose phosphorylase, ZINC ION
Authors:Dai, L, Chang, Z, Yang, J, Liu, W, Yang, Y, Chen, C.-C, Zhang, L, Huang, J, Sun, Y, Guo, R.-T.
Deposit date:2021-08-01
Release date:2022-01-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structural investigation of a thermostable 1,2-beta-mannobiose phosphorylase from Thermoanaerobacter sp. X-514.
Biochem.Biophys.Res.Commun., 579, 2021
7FIQ
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The crystal structure of mannose-bound beta-1,2-mannobiose phosphorylase from Thermoanaerobacter sp.
Descriptor: Beta-1,2-mannobiose phosphorylase, GLYCEROL, PENTAETHYLENE GLYCOL, ...
Authors:Dai, L, Chang, Z, Yang, J, Liu, W, Yang, Y, Chen, C.-C, Zhang, L, Huang, J, Sun, Y, Guo, R.-T.
Deposit date:2021-08-01
Release date:2022-01-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural investigation of a thermostable 1,2-beta-mannobiose phosphorylase from Thermoanaerobacter sp. X-514.
Biochem.Biophys.Res.Commun., 579, 2021
7FIS
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BU of 7fis by Molmil
The crystal structure of beta-1,2-mannobiose phosphorylase in complex with mannose 1-phosphate (M1P)
Descriptor: 1-O-phosphono-alpha-D-mannopyranose, Beta-1,2-mannobiose phosphorylase, GLYCEROL, ...
Authors:Dai, L, Chang, Z, Yang, J, Liu, W, Yang, Y, Chen, C.-C, Zhang, L, Huang, J, Sun, Y, Guo, R.-T.
Deposit date:2021-08-01
Release date:2022-01-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structural investigation of a thermostable 1,2-beta-mannobiose phosphorylase from Thermoanaerobacter sp. X-514.
Biochem.Biophys.Res.Commun., 579, 2021
7FIR
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The crystal structure of beta-1,2-mannobiose phosphorylase in complex with 1,4-mannobiose
Descriptor: Beta-1,2-mannobiose phosphorylase, PENTAETHYLENE GLYCOL, TRIETHYLENE GLYCOL, ...
Authors:Dai, L, Chang, Z, Yang, J, Liu, W, Yang, Y, Chen, C.-C, Zhang, L, Huang, J, Sun, Y, Guo, R.-T.
Deposit date:2021-08-01
Release date:2022-01-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural investigation of a thermostable 1,2-beta-mannobiose phosphorylase from Thermoanaerobacter sp. X-514.
Biochem.Biophys.Res.Commun., 579, 2021
8J2K
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BU of 8j2k by Molmil
Crystal structure of a bright green fluorescent protein (StayGold) with double mutation (N137A, Q140S) in jellyfish Cytaeis uchidae from Biortus
Descriptor: 1,2-ETHANEDIOL, StayGold(N137A, Q140S)
Authors:Wu, J, Wang, F, Gui, W, Cheng, W, Yang, Y.
Deposit date:2023-04-14
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a bright green fluorescent protein (StayGold) in jellyfish Cytaeis uchidae from Biortus
To Be Published
8J2L
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Crystal structure of a bright green fluorescent protein (StayGold) with double mutations (N137A, Y187F) in jellyfish Cytaeis uchidae from Biortus
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, SODIUM ION, ...
Authors:Wu, J, Wang, F, Gui, W, Cheng, W, Yang, Y.
Deposit date:2023-04-14
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a bright green fluorescent protein (StayGold) in jellyfish Cytaeis uchidae from Biortus
To Be Published
8J2H
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Crystal structure of a bright green fluorescent protein (StayGold) with single mutation (N137A) in jellyfish Cytaeis uchidae from Biortus
Descriptor: GLYCEROL, SODIUM ION, StayGold(N137A)
Authors:Wu, J, Wang, F, Gui, W, Cheng, W, Yang, Y.
Deposit date:2023-04-14
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a bright green fluorescent protein (StayGold) in jellyfish Cytaeis uchidae from Biortus
To Be Published
8J2J
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Crystal structure of a bright green fluorescent protein (StayGold) with single mutation (Y187F) in jellyfish Cytaeis uchidae from Biortus
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, StayGold(Y187F)
Authors:Wu, J, Wang, F, Gui, W, Cheng, W, Yang, Y.
Deposit date:2023-04-14
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a bright green fluorescent protein (StayGold) in jellyfish Cytaeis uchidae from Biortus
To Be Published
8J3J
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Crystal structure of a bright green fluorescent protein (StayGold) with double mutations (Q140S, Y187F) in jellyfish Cytaeis uchidae from Biortus
Descriptor: 1,2-ETHANEDIOL, StayGold(Q140S, Y187F)
Authors:Wu, J, Wang, F, Gui, W, Cheng, W, Yang, Y.
Deposit date:2023-04-17
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a bright green fluorescent protein (StayGold) in jellyfish Cytaeis uchidae from Biortus
To Be Published
8J2I
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BU of 8j2i by Molmil
Crystal structure of a bright green fluorescent protein (StayGold) with single mutation (Q140S) in jellyfish Cytaeis uchidae from Biortus
Descriptor: 1,2-ETHANEDIOL, StayGold(Q140S)
Authors:Wu, J, Wang, F, Gui, W, Cheng, W, Yang, Y.
Deposit date:2023-04-14
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of a bright green fluorescent protein (StayGold) in jellyfish Cytaeis uchidae from Biortus
To Be Published
6JIP
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BU of 6jip by Molmil
Crystal structure of Streptococcus pneumoniae SP_0782 (residues 7-79) in complex with single-stranded DNA dT6
Descriptor: DNA (5'-D(*TP*TP*TP*TP*T)-3'), PENTAETHYLENE GLYCOL, SP_0782
Authors:Fang, X, Lu, G, Li, S, Zhu, J, Yang, Y, Gong, P.
Deposit date:2019-02-22
Release date:2019-11-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.659 Å)
Cite:Structural insight into the length-dependent binding of ssDNA by SP_0782 from Streptococcus pneumoniae, reveals a divergence in the DNA-binding interface of PC4-like proteins.
Nucleic Acids Res., 48, 2020
6JIQ
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BU of 6jiq by Molmil
Crystal structure of Streptococcus pneumoniae SP_0782 (residues 7-79) in complex with single-stranded DNA dT6
Descriptor: DNA (5'-D(*TP*TP*TP*TP*T)-3'), SP_0782
Authors:Fang, X, Lu, G, Li, S, Zhu, J, Yang, Y, Gong, P.
Deposit date:2019-02-22
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural insight into the length-dependent binding of ssDNA by SP_0782 from Streptococcus pneumoniae, reveals a divergence in the DNA-binding interface of PC4-like proteins.
Nucleic Acids Res., 48, 2020
5ZKL
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Crystal structure of Streptococcus pneumoniae SP_0782 (residues 7-79) in complex with single-stranded DNA dT12
Descriptor: DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), SP_0782
Authors:Lu, G, Li, S, Zhu, J, Yang, Y, Gong, P.
Deposit date:2018-03-24
Release date:2019-03-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.951 Å)
Cite:Structural insight into the length-dependent binding of ssDNA by SP_0782 from Streptococcus pneumoniae, reveals a divergence in the DNA-binding interface of PC4-like proteins.
Nucleic Acids Res., 48, 2020

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