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PDB: 76 results

1ZH4
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BU of 1zh4 by Molmil
Crystal Structure Of The Mg+2/BeF3-Bound Receiver Domain Of Kdp Potassium Transport System Response Regulator KdpE
Descriptor: BERYLLIUM TRIFLUORIDE ION, KDP operon transcriptional regulatory protein kdpE, MAGNESIUM ION
Authors:Toro-Roman, A, Wu, T, Stock, A.M.
Deposit date:2005-04-22
Release date:2005-12-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A common dimerization interface in bacterial response regulators KdpE and TorR.
Protein Sci., 14, 2005
1ZGZ
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BU of 1zgz by Molmil
Crystal Structure Of The Receiver Domain Of TMAO Respiratory System Response Regulator TorR
Descriptor: GLYCEROL, SULFATE ION, TorCAD operon transcriptional regulatory protein torR
Authors:Toro-Roman, A, Wu, T, Stock, A.M.
Deposit date:2005-04-22
Release date:2005-12-13
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A common dimerization interface in bacterial response regulators KdpE and TorR.
Protein Sci., 14, 2005
8GXD
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BU of 8gxd by Molmil
L-LEUCINE DEHYDROGENASE FROM EXIGUOBACTERIUM SIBIRICUM
Descriptor: CALCIUM ION, GLYCEROL, Glu/Leu/Phe/Val dehydrogenase
Authors:Mu, X, Nie, Y, Wu, T, Wang, Y, Zhang, N, Yin, D, Xu, Y.
Deposit date:2022-09-19
Release date:2023-04-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Reshaping Substrate-Binding Pocket of Leucine Dehydrogenase for Bidirectionally Accessing Structurally Diverse Substrates
Acs Catalysis, 13, 2023
8I78
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BU of 8i78 by Molmil
Meso-Diaminopimelate dehydrogenase
Descriptor: Meso-diaminopimelate D-dehydrogenase
Authors:Wei, S, Wu, T.F.
Deposit date:2023-01-31
Release date:2024-02-07
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Analysis of the catalytic mechanism of meso-DAPDH and extension of D-aromatic amino acid substrate scope
To Be Published
4H86
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BU of 4h86 by Molmil
Crystal structure of Ahp1 from Saccharomyces cerevisiae in reduced form
Descriptor: Peroxiredoxin type-2
Authors:Liu, M, Wang, F, Qiu, R, Wu, T, Gu, S, Tang, R, Ji, C.
Deposit date:2012-09-21
Release date:2012-10-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Crystal structure of Ahp1 from Saccharomyces cerevisiae in reduced form
To be Published
4GXP
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BU of 4gxp by Molmil
Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA
Descriptor: Beta-glucosidase Chimeric protein
Authors:Smith, M.A, Romero, P.A, Wu, T, Brustad, E.M, Arnold, F.H.
Deposit date:2012-09-04
Release date:2013-01-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Chimeragenesis of distantly-related proteins by noncontiguous recombination.
Protein Sci., 22, 2013
8GYT
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BU of 8gyt by Molmil
Cryo-EM structure of human Pannexin-3 R36S/F40R variant in pre-open state.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Pannexin-3
Authors:Cong, Y, Jin, X, Kong, F, Wu, T, Yan, C.
Deposit date:2022-09-23
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:Inner channel lipids regulated gating mechanism of human pannexins.
To Be Published
3WP5
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BU of 3wp5 by Molmil
The crystal structure of mutant CDBFV E109A from Neocallimastix patriciarum
Descriptor: CDBFV
Authors:Cheng, Y.S, Chen, C.C, Huang, C.H, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T.
Deposit date:2014-01-09
Release date:2014-03-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structural analysis of a glycoside hydrolase family 11 xylanase from Neocallimastix patriciarum: insights into the molecular basis of a thermophilic enzyme.
J.Biol.Chem., 289, 2014
7XIJ
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BU of 7xij by Molmil
Crystal structure of CBP bromodomain liganded with Y08175
Descriptor: 3-[(1-ethanoyl-5-methoxy-indol-3-yl)carbonylamino]-4-fluoranyl-5-(1-methylpyrazol-4-yl)benzoic acid, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Xiang, Q, Wang, C, Wu, T, Zhang, Y, Zhang, C, Luo, G, Wu, X, Shen, H, Xu, Y.
Deposit date:2022-04-13
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of CBP bromodomain liganded with Y08175
To Be Published
7XNE
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BU of 7xne by Molmil
Crystal structure of CBP bromodomain liganded with Y08284
Descriptor: CREB-binding protein, GLYCEROL, N-[3-(1-cyclopropylpyrazol-4-yl)-2-fluoranyl-5-[(1S)-1-oxidanylethyl]phenyl]-3-ethanoyl-7-methoxy-indolizine-1-carboxamide
Authors:Xiang, Q, Wang, C, Wu, T, Zhang, C, Hu, Q, Luo, G, Hu, J, Zhuang, X, Zou, L, Shen, H, Wu, X, Zhang, Y, Kong, X, Xu, Y.
Deposit date:2022-04-28
Release date:2022-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Design, Synthesis, and Biological Evaluation of 1-(Indolizin-3-yl)ethan-1-ones as CBP Bromodomain Inhibitors for the Treatment of Prostate Cancer.
J.Med.Chem., 65, 2022
3WP6
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BU of 3wp6 by Molmil
The complex structure of CDBFV E109A with xylotriose
Descriptor: CDBFV, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Cheng, Y.S, Chen, C.C, Huang, C.H, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T.
Deposit date:2014-01-09
Release date:2014-03-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Structural analysis of a glycoside hydrolase family 11 xylanase from Neocallimastix patriciarum: insights into the molecular basis of a thermophilic enzyme.
J.Biol.Chem., 289, 2014
3WP4
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BU of 3wp4 by Molmil
The crystal structure of native CDBFV from Neocallimastix patriciarum
Descriptor: CDBFV, SULFATE ION
Authors:Cheng, Y.S, Chen, C.C, Huang, C.H, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T.
Deposit date:2014-01-09
Release date:2014-03-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Structural analysis of a glycoside hydrolase family 11 xylanase from Neocallimastix patriciarum: insights into the molecular basis of a thermophilic enzyme.
J.Biol.Chem., 289, 2014
6KYC
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BU of 6kyc by Molmil
Structure of the S207A mutant of Clostridium difficile sortase B
Descriptor: Putative peptidase C60B, sortase B
Authors:Kang, C.Y, Huang, I.H, Wu, T.Y, Chang, J.C, Hsiao, Y.Y, Cheng, C.H, Tsai, W.J, Hsu, K.C, Wang, S.Y.
Deposit date:2019-09-17
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Functional analysis ofClostridium difficilesortase B reveals key residues for catalytic activity and substrate specificity.
J.Biol.Chem., 295, 2020
6KYD
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BU of 6kyd by Molmil
Structure of the R217A mutant of Clostridium difficile sortase B
Descriptor: Putative peptidase C60B, sortase B
Authors:Kang, C.Y, Huang, I.H, Wu, T.Y, Chang, J.C, Hsiao, Y.Y, Cheng, C.H, Tsai, W.J, Hsu, K.C, Wang, S.Y.
Deposit date:2019-09-18
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Functional analysis ofClostridium difficilesortase B reveals key residues for catalytic activity and substrate specificity.
J.Biol.Chem., 295, 2020
4JKB
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BU of 4jkb by Molmil
Open and closed forms of V1788D human PRP8 RNase H-like domain with bound Mg ion
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JK9
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BU of 4jk9 by Molmil
Open and closed forms of wild-type human PRP8 RNase H-like domain with bound Co ion
Descriptor: CHLORIDE ION, COBALT (II) ION, GLYCEROL, ...
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JKH
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BU of 4jkh by Molmil
Open and closed forms of D1781E human PRP8 RNase H-like domain with bound Mg ion
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JK7
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BU of 4jk7 by Molmil
Open and closed forms of wild-type human PRP8 RNase H-like domain with bound Mg ion
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JKD
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BU of 4jkd by Molmil
Open and closed forms of I1790Y human PRP8 RNase H-like domain with bound Mg ion
Descriptor: CHLORIDE ION, MAGNESIUM ION, Pre-mRNA-processing-splicing factor 8
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JKC
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BU of 4jkc by Molmil
Open and closed forms of T1800E human PRP8 RNase H-like domain with bound Mg ion
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JKE
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BU of 4jke by Molmil
Open and closed forms of T1789P human PRP8 RNase H-like domain with bound Mg ion
Descriptor: MAGNESIUM ION, Pre-mRNA-processing-splicing factor 8
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JK8
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Open and closed forms of R1865A human PRP8 RNase H-like domain with bound Mg ion
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JKF
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BU of 4jkf by Molmil
Open and closed forms of T1791P+R1865A human PRP8 RNase H-like domain with bound Mg ion
Descriptor: MAGNESIUM ION, Pre-mRNA-processing-splicing factor 8
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JKA
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BU of 4jka by Molmil
Open and closed forms of R1865A human PRP8 RNase H-like domain with bound Co ion
Descriptor: CHLORIDE ION, COBALT (II) ION, Pre-mRNA-processing-splicing factor 8
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013
4JKG
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BU of 4jkg by Molmil
Open and closed forms of mixed T1789P+R1865A and R1865A human PRP8 RNase H-like domain with bound Mg ion
Descriptor: MAGNESIUM ION, Pre-mRNA-processing-splicing factor 8
Authors:Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M.
Deposit date:2013-03-09
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Nat.Struct.Mol.Biol., 20, 2013

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