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PDB: 846 results

8R0G
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BU of 8r0g by Molmil
Capsid structure of Giardiavirus (GLV) CAT strain
Descriptor: Capsid protein
Authors:Wang, H, Gianluca, M, Munke, A, Hassan, M.M, Lalle, M, Okamoto, K.
Deposit date:2023-10-31
Release date:2024-04-03
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Capsid structure of Giardiavirus (GLV) CAT strain
To Be Published
7FH7
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BU of 7fh7 by Molmil
Friedel-Crafts alkylation enzyme CylK mutant Y37F
Descriptor: 5-[(2S,7R)-7-fluoranyl-2-methyl-undecyl]benzene-1,3-diol, CALCIUM ION, CHLORIDE ION, ...
Authors:Wang, H.Q, Wei, Z, Xiang, Z.
Deposit date:2021-07-29
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structural Basis for the Friedel-Crafts Alkylation in Cylindrocyclophane Biosynthesis
ACS Catal., 12, 2022
7FH8
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BU of 7fh8 by Molmil
Friedel-Crafts alkylation enzyme CylK mutant H391A
Descriptor: 2-[(5S,10S)-11-[3,5-bis(oxidanyl)phenyl]-10-methyl-undecan-5-yl]-5-[(2S,7R)-7-fluoranyl-2-methyl-undecyl]benzene-1,3-diol, CALCIUM ION, CHLORIDE ION, ...
Authors:Wang, H.Q, Wei, Z, Xiang, Z.
Deposit date:2021-07-29
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structural Basis for the Friedel-Crafts Alkylation in Cylindrocyclophane Biosynthesis
ACS Catal., 12, 2022
8H1L
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BU of 8h1l by Molmil
Crystal structure of glucose-2-epimerase in complex with D-Glucitol from Runella slithyformis Runsl_4512
Descriptor: N-acylglucosamine 2-epimerase, sorbitol
Authors:Wang, H, Sun, X.M, Saburi, W, Yu, J, Yao, M.
Deposit date:2022-10-03
Release date:2023-07-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structural insights into the substrate specificity and activity of a novel mannose 2-epimerase from Runella slithyformis.
Acta Crystallogr D Struct Biol, 79, 2023
5YS1
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BU of 5ys1 by Molmil
Crystal structure of Multicopper Oxidase CueO G304K mutant
Descriptor: Blue copper oxidase CueO, COPPER (II) ION
Authors:Wang, H.Q, Liu, X.Q, Zhao, J.T, Yue, Q.X, Yan, Y.H, Dong, Y.H, Fan, Y.L, Tian, J, Wu, N.F, Gong, Y.
Deposit date:2017-11-12
Release date:2018-10-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Crystal structures of multicopper oxidase CueO G304K mutant: structural basis of the increased laccase activity
Sci Rep, 8, 2018
5THR
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BU of 5thr by Molmil
Cryo-EM structure of a BG505 Env-sCD4-17b-8ANC195 complex
Descriptor: 17b Fab VH domain, 17b Fab VL domain, 8ANC195 G52K5 VH domain, ...
Authors:Wang, H, Bjorkman, P.J.
Deposit date:2016-09-30
Release date:2016-11-16
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (8.9 Å)
Cite:Cryo-EM structure of a CD4-bound open HIV-1 envelope trimer reveals structural rearrangements of the gp120 V1V2 loop.
Proc.Natl.Acad.Sci.USA, 113, 2016
6A9S
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BU of 6a9s by Molmil
The crystal structure of vaccinia virus A26 (residues 1-397)
Descriptor: 1,2-ETHANEDIOL, Protein A26
Authors:Wang, H.C, Ko, T.Z, Luo, Y.C, Liao, Y.T, Chang, W.
Deposit date:2018-07-16
Release date:2019-06-12
Last modified:2019-07-10
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Vaccinia viral A26 protein is a fusion suppressor of mature virus and triggers membrane fusion through conformational change at low pH.
Plos Pathog., 15, 2019
5BYA
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BU of 5bya by Molmil
Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with ADP and 1,5-(PCP)2-IP4
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Wang, H, Shears, S.B.
Deposit date:2015-06-10
Release date:2015-07-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Synthetic tools for studying the chemical biology of InsP8.
Chem.Commun.(Camb.), 51, 2015
5BYB
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BU of 5byb by Molmil
Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with ADP and 1,5-(PA)2-IP4
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Wang, H, Shears, S.B.
Deposit date:2015-06-10
Release date:2015-07-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Synthetic tools for studying the chemical biology of InsP8.
Chem.Commun.(Camb.), 51, 2015
4QBS
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BU of 4qbs by Molmil
Crystal structure of DNMT3a ADD domain E545R mutant bound to H3T3ph peptide
Descriptor: DNA (cytosine-5)-methyltransferase 3A, Histone H3, SULFATE ION, ...
Authors:Wang, H, Li, H.
Deposit date:2014-05-08
Release date:2015-05-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Engineering of a histone-recognition domain in a de novo DNA methyltransferase alters the epigenetic landscape of ESCs
To be Published
4QBR
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BU of 4qbr by Molmil
Crystal structure of DNMT3a ADD domain G550D mutant bound to H3 peptide
Descriptor: DNA (cytosine-5)-methyltransferase 3A, Histone H3, ZINC ION
Authors:Wang, H, Li, H.
Deposit date:2014-05-08
Release date:2015-05-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Engineering of a histone-recognition domain in a de novo DNA methyltransferase alters the epigenetic landscape of ESCs
To be Published
5DGH
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BU of 5dgh by Molmil
Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with AMP-PNP and 5-(PCP)-IP5
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2, ...
Authors:Wang, H, Shears, S.B.
Deposit date:2015-08-27
Release date:2016-08-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Cellular Cations Control Conformational Switching of Inositol Pyrophosphate Analogues.
Chemistry, 22, 2016
5VIY
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BU of 5viy by Molmil
BG505 SOSIP.664 in complex with broadly neutralizing antibodies BG1 and 8ANC195
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 8ANC195 G52K5 Fab heavy chain, ...
Authors:Wang, H, Bjorkman, P.J.
Deposit date:2017-04-17
Release date:2017-06-21
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Asymmetric recognition of HIV-1 Envelope trimer by V1V2 loop-targeting antibodies.
Elife, 6, 2017
7CB2
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BU of 7cb2 by Molmil
The 6-phosphogluconate dehydrogenase (NADP-bound) from Staphylococcus aureus
Descriptor: 6-phosphogluconate dehydrogenase, decarboxylating, CITRIC ACID, ...
Authors:Wang, H, Wang, M, Sun, H.
Deposit date:2020-06-10
Release date:2021-06-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The 6-phosphogluconate dehydrogenase (NADP-bound) structures from Staphylococcus aureus
To Be Published
3USJ
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BU of 3usj by Molmil
Crystal structure of LeuT bound to L-leucine in space group P21 from lipid bicelles
Descriptor: LEUCINE, SODIUM ION, Transporter
Authors:Wang, H, Elferich, J, Gouaux, E.
Deposit date:2011-11-23
Release date:2012-01-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structures of LeuT in bicelles define conformation and substrate binding in a membrane-like context.
Nat.Struct.Mol.Biol., 19, 2012
3USO
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BU of 3uso by Molmil
Crystal structure of LeuT bound to L-selenomethionine in space group P21212 from lipid bicelles
Descriptor: SELENOMETHIONINE, SODIUM ION, Transporter
Authors:Wang, H, Elferich, J, Gouaux, E.
Deposit date:2011-11-23
Release date:2012-01-11
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Structures of LeuT in bicelles define conformation and substrate binding in a membrane-like context.
Nat.Struct.Mol.Biol., 19, 2012
8HE9
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BU of 8he9 by Molmil
Crystal structure of CTSB in complex with K777
Descriptor: Cathepsin B, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Wang, H, Li, D, Sun, L, Yang, H.
Deposit date:2022-11-07
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of CTSB in complex with K777
To Be Published
8HEN
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BU of 8hen by Molmil
Crystal structure of CTSB in complex with 212-148
Descriptor: 2-[4-[[(2~{S})-1-oxidanylidene-3-phenyl-1-[[(3~{S})-1-phenyl-5-(phenylsulfonyl)pentan-3-yl]amino]propan-2-yl]carbamoyl]piperazin-1-yl]ethyl 4-carbamimidamidobenzoate, Cathepsin B, DIMETHYL SULFOXIDE, ...
Authors:Wang, H, Li, D, Sun, L, Yang, H.
Deposit date:2022-11-08
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of CTSB in complex with 212-148
To Be Published
8HET
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BU of 8het by Molmil
Crystal structure of CTSL in complex with E64d
Descriptor: Procathepsin L, ethyl (3S)-3-hydroxy-4-({(2S)-4-methyl-1-[(3-methylbutyl)amino]-1-oxopentan-2-yl}amino)-4-oxobutanoate
Authors:Wang, H, Shao, M, Sun, L, Yang, H.
Deposit date:2022-11-08
Release date:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of CTSB in complex with K777
To Be Published
8HEI
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BU of 8hei by Molmil
Crystal structure of CTSB in complex with E64d
Descriptor: Cathepsin B, GLYCEROL, ethyl (3S)-3-hydroxy-4-({(2S)-4-methyl-1-[(3-methylbutyl)amino]-1-oxopentan-2-yl}amino)-4-oxobutanoate
Authors:Wang, H, Li, D, Sun, L, Yang, H.
Deposit date:2022-11-08
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of CTSB in complex with E64d
To Be Published
6CM3
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BU of 6cm3 by Molmil
BG505 SOSIP in complex with sCD4, 17b, 8ANC195
Descriptor: 17b Fab heavy chain, 17b Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, H, Bjorkman, P.J.
Deposit date:2018-03-02
Release date:2018-10-17
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:Partially Open HIV-1 Envelope Structures Exhibit Conformational Changes Relevant for Coreceptor Binding and Fusion.
Cell Host Microbe, 24, 2018
8IQL
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BU of 8iql by Molmil
Structural basis of the specificity and interaction mechanism of Bmf binding to pro-survival proteins
Descriptor: Apoptosis regulator Bcl-2, Bcl-2-modifying factor
Authors:Wang, H, Guo, M, Wei, H, Chen, Y.
Deposit date:2023-03-16
Release date:2023-08-23
Method:X-RAY DIFFRACTION (2.9577 Å)
Cite:Structural basis of the specificity and interaction mechanism of Bmf binding to pro-survival Bcl-2 family proteins.
Comput Struct Biotechnol J, 21, 2023
8IQM
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BU of 8iqm by Molmil
Structural basis of the specificity and interaction mechanism of Bmf binding to pro-survival proteins
Descriptor: Bcl2 modifying factor, Induced myeloid leukemia cell differentiation protein Mcl-1
Authors:Wang, H, Guo, M, Wei, H, Chen, Y.
Deposit date:2023-03-16
Release date:2023-08-23
Method:X-RAY DIFFRACTION (1.967 Å)
Cite:Structural basis of the specificity and interaction mechanism of Bmf binding to pro-survival Bcl-2 family proteins.
Comput Struct Biotechnol J, 21, 2023
3T9D
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BU of 3t9d by Molmil
Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with AMPPNP and 5-(PP)-IP5 (5-IP7)
Descriptor: (1r,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate, Inositol Pyrophosphate Kinase, MAGNESIUM ION, ...
Authors:Wang, H, Falck, J, Hall, T.M.T, Shears, S.B.
Deposit date:2011-08-02
Release date:2011-12-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis for an inositol pyrophosphate kinase surmounting phosphate crowding.
Nat.Chem.Biol., 8, 2011
3T9E
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BU of 3t9e by Molmil
Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with ADP, 5-(PP)-IP5 (5-IP7) and MgF3 (transition state mimic)
Descriptor: (1r,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate, ADENOSINE-5'-DIPHOSPHATE, Inositol Pyrophosphate Kinase, ...
Authors:Wang, H, Falck, J, Hall, T.M.T, Shears, S.B.
Deposit date:2011-08-02
Release date:2011-12-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for an inositol pyrophosphate kinase surmounting phosphate crowding.
Nat.Chem.Biol., 8, 2011

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