Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 686 results

1VMP
DownloadVisualize
BU of 1vmp by Molmil
STRUCTURE OF THE ANTI-HIV CHEMOKINE VMIP-II
Descriptor: PROTEIN (ANTI-HIV CHEMOKINE MIP VII)
Authors:Liwang, A.C, Wang, Z.-X, Sun, Y, Peiper, S.C, Liwang, P.J.
Deposit date:1999-03-25
Release date:1999-11-24
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The solution structure of the anti-HIV chemokine vMIP-II.
Protein Sci., 8, 1999
1VS2
DownloadVisualize
BU of 1vs2 by Molmil
Interactions of quinoxaline antibiotic and DNA: the molecular structure of a TRIOSTIN A-D(GCGTACGC) complex
Descriptor: 2-CARBOXYQUINOXALINE, 5'-D(*GP*CP*GP*TP*AP*CP*GP*C)-3', TRIOSTIN A
Authors:Wang, A.H.-J, Ughetto, G, Quigley, G.J, Rich, A.
Deposit date:1986-10-21
Release date:2006-06-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Interactions of Quinoxaline Antibiotic and DNA: The Molecular Structure of a Triostin A-D(Gcgtacgc) Complex.
J.Biomol.Struct.Dyn., 4, 1986
1VT6
DownloadVisualize
BU of 1vt6 by Molmil
Molecular structure of the octamer D(G-G-C-C-G-G-C-C) modified A-DNA
Descriptor: DNA (5'-D(*GP*GP*CP*CP*GP*GP*CP*C)-3')
Authors:Wang, A.H.-J, Fujii, S, Van Boom, J.H, Rich, A.
Deposit date:1988-08-18
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Molecular structure of the octamer d(G-G-C-C-G-G-C-C): modified A-DNA.
Proc.Natl.Acad.Sci.USA, 79, 1982
5VX2
DownloadVisualize
BU of 5vx2 by Molmil
Mcl-1 in complex with Bim-h3Pc-RT
Descriptor: 1,2-ETHANEDIOL, Bcl-2-like protein 11, Induced myeloid leukemia cell differentiation protein Mcl-1 homolog,Induced myeloid leukemia cell differentiation protein Mcl-1 chimera
Authors:Cowan, A.D, Brouwer, J.M, Colman, P.M, Czabotar, P.E.
Deposit date:2017-05-23
Release date:2017-11-15
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Conversion of Bim-BH3 from Activator to Inhibitor of Bak through Structure-Based Design.
Mol. Cell, 68, 2017
1MM3
DownloadVisualize
BU of 1mm3 by Molmil
Solution structure of the 2nd PHD domain from Mi2b with C-terminal loop replaced by corresponding loop from WSTF
Descriptor: Mi2-beta(Chromodomain helicase-DNA-binding protein 4) and transcription factor WSTF, ZINC ION
Authors:Kwan, A.H.Y, Gell, D.A, Verger, A, Crossley, M, Matthews, J.M, Mackay, J.P.
Deposit date:2002-09-02
Release date:2003-07-22
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Engineering a Protein Scaffold from a PHD Finger
structure, 11, 2003
1M36
DownloadVisualize
BU of 1m36 by Molmil
Solution Structure of a CCHC Zinc Finger from MOZ
Descriptor: Monocytic leukemia zinc finger protein, ZINC ION
Authors:Kwan, A.H.Y, Gell, D.A, Liew, C.K, Mackay, J.P.
Deposit date:2002-06-27
Release date:2004-01-27
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution Structure of a CCHC Zinc Finger from MOZ
To be Published
3TBG
DownloadVisualize
BU of 3tbg by Molmil
Human cytochrome P450 2D6 with two thioridazines bound in active site
Descriptor: 10-{2-[(2R)-1-methylpiperidin-2-yl]ethyl}-2-(methylsulfanyl)-10H-phenothiazine, Cytochrome P450 2D6, GLYCEROL, ...
Authors:Wang, A, Stout, C.D, Johnson, E.F.
Deposit date:2011-08-05
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Contributions of Ionic Interactions and Protein Dynamics to Cytochrome P450 2D6 (CYP2D6) Substrate and Inhibitor Binding.
J.Biol.Chem., 290, 2015
2FMC
DownloadVisualize
BU of 2fmc by Molmil
Solution structure of the class I hydrophobin EAS
Descriptor: Hydrophobin
Authors:Kwan, A.H.
Deposit date:2006-01-09
Release date:2006-03-28
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structural basis for rodlet assembly in fungal hydrophobins
Proc.Natl.Acad.Sci.Usa, 103, 2006
8OV6
DownloadVisualize
BU of 8ov6 by Molmil
Ternary structure of intramolecular bivalent glue degrader IBG1 bound to BRD4 and DCAF16:DDB1deltaBPB
Descriptor: Bromodomain-containing protein 4, DDB1- and CUL4-associated factor 16, DDB1deltaBPB, ...
Authors:Cowan, A.D, Sundaramoorthy, R, Nakasone, M.A, Ciulli, A.
Deposit date:2023-04-25
Release date:2023-05-17
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:Targeted protein degradation via intramolecular bivalent glues.
Nature, 627, 2024
4WAV
DownloadVisualize
BU of 4wav by Molmil
Crystal Structure of Haloquadratum walsbyi bacteriorhodopsin mutant D93N
Descriptor: Bacteriorhodopsin-I, RETINAL, [(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate
Authors:Wang, A.H.J, Hsu, M.F, Yang, C.S, Fu, H.Y.
Deposit date:2014-09-02
Release date:2015-09-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of an acid-tolerant light-driven proton pump at 1.85 Angstroms resolution
To be published
7BBL
DownloadVisualize
BU of 7bbl by Molmil
Structure of human Gemin6/Gemin7/Gemin8 trimeric complex
Descriptor: Gem-associated protein 6, Gem-associated protein 7, Gem-associated protein 8
Authors:Viswanathan, A, Grimm, C, Fischer, U.
Deposit date:2020-12-17
Release date:2021-01-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.521 Å)
Cite:Identification and structural analysis of the Schizosaccharomyces pombe SMN complex.
Nucleic Acids Res., 49, 2021
4WNV
DownloadVisualize
BU of 4wnv by Molmil
Human Cytochrome P450 2D6 Quinine Complex
Descriptor: Cytochrome P450 2D6, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Wang, A, Stout, C.D, Johnson, E.F.
Deposit date:2014-10-14
Release date:2015-01-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Contributions of Ionic Interactions and Protein Dynamics to Cytochrome P450 2D6 (CYP2D6) Substrate and Inhibitor Binding.
J.Biol.Chem., 290, 2015
4WNU
DownloadVisualize
BU of 4wnu by Molmil
Human Cytochrome P450 2D6 Quinidine Complex
Descriptor: Cytochrome P450 2D6, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Wang, A, Stout, C.D, Johnson, E.F.
Deposit date:2014-10-14
Release date:2015-01-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Contributions of Ionic Interactions and Protein Dynamics to Cytochrome P450 2D6 (CYP2D6) Substrate and Inhibitor Binding.
J.Biol.Chem., 290, 2015
4WNT
DownloadVisualize
BU of 4wnt by Molmil
Human Cytochrome P450 2D6 Ajmalicine Complex
Descriptor: Ajmalicine, Cytochrome P450 2D6, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Wang, A, Stout, C.D, Johnson, E.F.
Deposit date:2014-10-14
Release date:2015-01-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Contributions of Ionic Interactions and Protein Dynamics to Cytochrome P450 2D6 (CYP2D6) Substrate and Inhibitor Binding.
J.Biol.Chem., 290, 2015
4WNW
DownloadVisualize
BU of 4wnw by Molmil
Human Cytochrome P450 2D6 Thioridazine Complex
Descriptor: 10-{2-[(2R)-1-methylpiperidin-2-yl]ethyl}-2-(methylsulfanyl)-10H-phenothiazine, Cytochrome P450 2D6, NICKEL (II) ION, ...
Authors:Wang, A, Stout, C.D, Johnson, E.F.
Deposit date:2014-10-14
Release date:2015-01-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.299 Å)
Cite:Contributions of Ionic Interactions and Protein Dynamics to Cytochrome P450 2D6 (CYP2D6) Substrate and Inhibitor Binding.
J.Biol.Chem., 290, 2015
1VTG
DownloadVisualize
BU of 1vtg by Molmil
THE MOLECULAR STRUCTURE OF A DNA-TRIOSTIN A COMPLEX
Descriptor: 2-CARBOXYQUINOXALINE, DNA (5'-D(*CP*GP*TP*AP*CP*G)-3'), triostin A
Authors:Wang, A.H.-J, Ughetto, G, Quigley, G.J, Hakoshima, T, Van Der Marel, G.A, Van Boom, J.H, Rich, A.
Deposit date:1988-08-18
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:The molecular structure of a DNA-triostin A complex.
Science, 225, 1984
2DCG
DownloadVisualize
BU of 2dcg by Molmil
MOLECULAR STRUCTURE OF A LEFT-HANDED DOUBLE HELICAL DNA FRAGMENT AT ATOMIC RESOLUTION
Descriptor: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), MAGNESIUM ION, SPERMINE
Authors:Wang, A.H.-J, Quigley, G.J, Kolpak, F.J, Crawford, J.L, Van Boom, J.H, Van Der Marel, G.A, Rich, A.
Deposit date:1988-08-29
Release date:1989-01-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Molecular structure of a left-handed double helical DNA fragment at atomic resolution.
Nature, 282, 1979
1D96
DownloadVisualize
BU of 1d96 by Molmil
MOLECULAR STRUCTURE OF R(GCG)D(TATACGC): A DNA-RNA HYBRID HELIX JOINED TO DOUBLE HELICAL DNA
Descriptor: DNA/RNA (5'-R(*GP*CP*GP*)-D(*TP*AP*TP*AP*CP*GP*C)-3')
Authors:Wang, A.H.-J, Fujii, S, Van Boom, J.H, Van Der Marel, G.A, Van Boeckel, S.A.A, Rich, A.
Deposit date:1992-10-17
Release date:1993-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular structure of r(GCG)d(TATACGC): a DNA--RNA hybrid helix joined to double helical DNA.
Nature, 299, 1982
2ZUG
DownloadVisualize
BU of 2zug by Molmil
Crystal structure of WSSV ICP11
Descriptor: ORF115 (WSSV285) (Wsv230)
Authors:Wang, A.H.-J, Wang, H.-C, Ko, T.-P, Lo, C.-F.
Deposit date:2008-10-17
Release date:2008-12-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:White spot syndrome virus protein ICP11: A histone-binding DNA mimic that disrupts nucleosome assembly
Proc.Natl.Acad.Sci.USA, 105, 2008
1D11
DownloadVisualize
BU of 1d11 by Molmil
INTERACTIONS BETWEEN AN ANTHRACYCLINE ANTIBIOTIC AND DNA MOLECULAR STRUCTURE OF DAUNOMYCIN COMPLEXED TO D(CPGPTPAPCPG) AT 1.2-ANGSTROMS RESOLUTION
Descriptor: DAUNOMYCIN, DNA (5'-D(*CP*GP*TP*AP*CP*G)-3'), SODIUM ION
Authors:Wang, A.H.-J, Ughetto, G, Quigley, G.J, Rich, A.
Deposit date:1989-10-20
Release date:1990-10-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Interactions between an anthracycline antibiotic and DNA: molecular structure of daunomycin complexed to d(CpGpTpApCpG) at 1.2-A resolution.
Biochemistry, 26, 1987
1D33
DownloadVisualize
BU of 1d33 by Molmil
Formaldehyde cross-links daunorubicin and DNA efficiently: HPLC and X-RAY diffraction studies
Descriptor: 5'-D(*CP*GP*CP*(G49)P*CP*G)-3', DAUNOMYCIN, MAGNESIUM ION
Authors:Wang, A.H.-J, Gao, Y.-G, Liaw, Y.-C, Li, Y.-K.
Deposit date:1991-02-27
Release date:1992-04-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Formaldehyde cross-links daunorubicin and DNA efficiently: HPLC and X-ray diffraction studies.
Biochemistry, 30, 1991
6O5Z
DownloadVisualize
BU of 6o5z by Molmil
Crystal Structure of the human MLKL pseudokinase domain bound to compound 2
Descriptor: 1,2-ETHANEDIOL, 1-[2-fluoranyl-5-(trifluoromethyl)phenyl]-3-[4-[methyl-[2-[(3-sulfamoylphenyl)amino]pyrimidin-4-yl]amino]phenyl]urea, Mixed lineage kinase domain-like protein
Authors:Cowan, A.D, Murphy, J.M, Pierotti, C.L, Lessene, G.L, Czabotar, P.E.
Deposit date:2019-03-04
Release date:2020-09-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.285 Å)
Cite:Potent Inhibition of Necroptosis by Simultaneously Targeting Multiple Effectors of the Pathway.
Acs Chem.Biol., 15, 2020
1VTC
DownloadVisualize
BU of 1vtc by Molmil
MOLECULAR STRUCTURE OF THE OCTAMER D(G-G-C-C-G-G-C-C) MODIFIED A-DNA
Descriptor: DNA (5'-D(*GP*GP*CP*CP*GP*GP*CP*C)-3')
Authors:Wang, A.H.-J, Fujii, S, Van Boom, J.H, Rich, A.
Deposit date:1988-08-18
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Molecular Structure of the Octamer d(G-G-C-C-G-G-C-C) Modified A-DNA
Proc.Natl.Acad.Sci.USA, 79, 1982
4YN6
DownloadVisualize
BU of 4yn6 by Molmil
Structural Insight reveals dynamics in repeating r(CAG) transcript found in Huntington's disease (HD) and Spinocerebellar ataxias (SCAs)
Descriptor: PHOSPHATE ION, RNA (5'-R(P*UP*UP*GP*GP*GP*CP*CP*AP*GP*CP*AP*GP*CP*AP*GP*GP*UP*CP*C)-3')
Authors:Tawani, A, Kumar, A.
Deposit date:2015-03-09
Release date:2015-04-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Structural Insights Reveal the Dynamics of the Repeating r(CAG) Transcript Found in Huntington's Disease (HD) and Spinocerebellar Ataxias (SCAs)
Plos One, 10, 2015
6JXG
DownloadVisualize
BU of 6jxg by Molmil
Crystasl Structure of Beta-glucosidase D2-BGL from Chaetomella Raphigera
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-glucosidase, alpha-D-mannopyranose
Authors:Wang, A.H.-J, Lee, C.C, Kao, M.R, Ho, T.H.D.
Deposit date:2019-04-23
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Chaetomella raphigerabeta-glucosidase D2-BGL has intriguing structural features and a high substrate affinity that renders it an efficient cellulase supplement for lignocellulosic biomass hydrolysis.
Biotechnol Biofuels, 12, 2019

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon