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PDB: 43 results

316D
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BU of 316d by Molmil
Selectivity of F8-actinomycin D for RNA:DNA hybrids and its anti-leukemia activity
Descriptor: 8-FLUORO-ACTINOMYCIN D, DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3')
Authors:Takusagawa, F, Takusagawa, K.T, Carlson, R.G, Weaver, R.F.
Deposit date:1997-03-05
Release date:1997-11-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:Selectivity of F8-Actinomycin D for RNA:DNA Hybrids and its Anti-Leukemia Activity.
Bioorg.Med.Chem., 5, 1997
2PBJ
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BU of 2pbj by Molmil
GSH-heme bound microsomal prostaglandin E synthase
Descriptor: CHLORIDE ION, GLUTATHIONE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Takusagawa, F, Yamada, T.
Deposit date:2007-03-28
Release date:2008-02-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:PGH2 degradation pathway catalyzed by GSH-heme complex bound microsomal prostaglandin E2 synthase type 2: the first example of a dual-function enzyme.
Biochemistry, 46, 2007
5ANA
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BU of 5ana by Molmil
THE CRYSTAL STRUCTURE OF D(GTACGTAC) AT 2.25 ANGSTROMS RESOLUTION. ARE THE A-DNA'S ALWAYS UNWOUND APPROXIMATELY 10 DEGREES AT THE C-G STEPS
Descriptor: DNA (5'-D(*GP*TP*AP*CP*GP*TP*AP*C)-3'), MAGNESIUM ION
Authors:Takusagawa, F.
Deposit date:1989-10-31
Release date:1990-04-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The crystal structure of d(GTACGTAC) at 2.25 A resolution: are the A-DNA's always unwound approximately 10 degrees at the C-G steps
J.Biomol.Struct.Dyn., 7, 1990
1K0U
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Inhibition of S-adenosylhomocysteine Hydrolase by "acyclic sugar" Adenosine Analogue D-eritadenine
Descriptor: D-ERITADENINE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, S-ADENOSYL-L-HOMOCYSTEINE HYDROLASE
Authors:Takusagawa, F, Huang, Y, Komoto, J, Takata, Y, Gomi, T, Ogawa, H, Fujioka, M, Powell, D.
Deposit date:2001-09-20
Release date:2001-10-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Inhibition of S-adenosylhomocysteine hydrolase by acyclic sugar adenosine analogue D-eritadenine. Crystal structure of S-adenosylhomocysteine hydrolase complexed with D-eritadenine.
J.Biol.Chem., 277, 2002
1KHH
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BU of 1khh by Molmil
Crystal Structure of Guanidinoacetate Methyltransferase from Rat Liver: A Template Structure of Protein Arginine Methyltransferase
Descriptor: Guanidinoacetate methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Takusagawa, F, Komoto, J.
Deposit date:2001-11-30
Release date:2001-12-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of guanidinoacetate methyltransferase from rat liver: a model structure of protein arginine methyltransferase.
J.Mol.Biol., 320, 2002
1KIA
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BU of 1kia by Molmil
Crystal structure of glycine N-methyltransferase complexed with S-adenosylmethionine and acetate
Descriptor: ACETATE ION, Glycine N-methyltransferase, S-ADENOSYLMETHIONINE
Authors:Takusagawa, F, Huang, Y.
Deposit date:2001-12-02
Release date:2003-06-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of glycine N-methyltransferase complexed with S-adenosylmethionine and acetate
To be Published
1MXA
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BU of 1mxa by Molmil
S-ADENOSYLMETHIONINE SYNTHETASE WITH PPI
Descriptor: MAGNESIUM ION, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Takusagawa, F, Kamitori, S, Markham, G.D.
Deposit date:1996-01-10
Release date:1996-07-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and function of S-adenosylmethionine synthetase: crystal structures of S-adenosylmethionine synthetase with ADP, BrADP, and PPi at 28 angstroms resolution.
Biochemistry, 35, 1996
1MXC
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S-ADENOSYLMETHIONINE SYNTHETASE WITH 8-BR-ADP
Descriptor: 8-BROMOADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Takusagawa, F, Kamitori, S, Markham, G.D.
Deposit date:1996-01-10
Release date:1996-07-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure and function of S-adenosylmethionine synthetase: crystal structures of S-adenosylmethionine synthetase with ADP, BrADP, and PPi at 28 angstroms resolution.
Biochemistry, 35, 1996
1MXB
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BU of 1mxb by Molmil
S-ADENOSYLMETHIONINE SYNTHETASE WITH ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Takusagawa, F, Kamitori, S, Markham, G.D.
Deposit date:1996-01-10
Release date:1996-07-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and function of S-adenosylmethionine synthetase: crystal structures of S-adenosylmethionine synthetase with ADP, BrADP, and PPi at 28 angstroms resolution.
Biochemistry, 35, 1996
1XRC
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BU of 1xrc by Molmil
CRYSTAL STRUCTURE OF S-ADENOSYLMETHIONINE SYNTHETASE
Descriptor: COBALT (II) ION, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Takusagawa, F, Kamitori, S, Misaki, S, Markham, G.D.
Deposit date:1995-10-26
Release date:1996-03-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of S-adenosylmethionine synthetase.
J.Biol.Chem., 271, 1996
1XRA
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BU of 1xra by Molmil
CRYSTAL STRUCTURE OF S-ADENOSYLMETHIONINE SYNTHETASE
Descriptor: MAGNESIUM ION, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Takusagawa, F, Kamitori, S, Misaki, S, Markham, G.D.
Deposit date:1995-10-26
Release date:1996-03-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of S-adenosylmethionine synthetase.
J.Biol.Chem., 271, 1996
1XRB
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S-adenosylmethionine synthetase (MAT, ATP: L-methionine S-adenosyltransferase, E.C.2.5.1.6) in which MET residues are replaced with selenomethionine residues (MSE)
Descriptor: MAGNESIUM ION, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Takusagawa, F, Kamitori, S, Misaki, S, Markham, G.D.
Deposit date:1995-10-26
Release date:1996-03-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of S-adenosylmethionine synthetase.
J.Biol.Chem., 271, 1996
1P7L
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BU of 1p7l by Molmil
S-Adenosylmethionine synthetase complexed with AMPPNP and Met.
Descriptor: (DIPHOSPHONO)AMINOPHOSPHONIC ACID, MAGNESIUM ION, METHIONINE, ...
Authors:Takusagawa, F, Komoto, J.
Deposit date:2003-05-02
Release date:2004-03-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the s-adenosylmethionine synthetase ternary complex: a novel catalytic mechanism of s-adenosylmethionine synthesis from ATP and MET.
Biochemistry, 43, 2004
2H5L
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BU of 2h5l by Molmil
S-Adenosylhomocysteine hydrolase containing NAD and 3-deaza-D-eritadenine
Descriptor: (2R,3R)-4-(4-AMINO-1H-IMIDAZO[4,5-C]PYRIDIN-1-YL)-2,3-DIHYDROXYBUTANOIC ACID, Adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Yamada, T, Komoto, J, Takusagawa, F.
Deposit date:2006-05-26
Release date:2007-04-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and function of eritadenine and its 3-deaza analogues: Potent inhibitors of S-adenosylhomocysteine hydrolase and hypocholesterolemic agents.
Biochem.Pharm., 73, 2007
2RKB
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BU of 2rkb by Molmil
Serine dehydratase like-1 from human cancer cells
Descriptor: POTASSIUM ION, PYRIDOXAL-5'-PHOSPHATE, Serine dehydratase-like
Authors:Yamada, T, Komoto, J, Kasuya, T, Mori, H, Ogawa, H, Takusagawa, F.
Deposit date:2007-10-16
Release date:2008-04-01
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A catalytic mechanism that explains a low catalytic activity of serine dehydratase like-1 from human cancer cells: Crystal structure and site-directed mutagenesis studies.
Biochim.Biophys.Acta, 1780, 2008
1FUG
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BU of 1fug by Molmil
S-ADENOSYLMETHIONINE SYNTHETASE
Descriptor: S-ADENOSYLMETHIONINE SYNTHETASE
Authors:Fu, Z, Markham, G.D, Takusagawa, F.
Deposit date:1996-02-25
Release date:1996-08-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Flexible loop in the structure of S-adenosylmethionine synthetase crystallized in the tetragonal modification.
J.Biomol.Struct.Dyn., 13, 1996
1RY0
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BU of 1ry0 by Molmil
Structure of prostaglandin F synthase with prostaglandin D2
Descriptor: Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROSTAGLANDIN D2
Authors:Komoto, J, Yamada, T, Watanabe, K, Takusagawa, F.
Deposit date:2003-12-19
Release date:2004-11-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystal structure of human prostaglandin F synthase (AKR1C3).
Biochemistry, 43, 2004
1RY8
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Prostaglandin F synthase complexed with NADPH and rutin
Descriptor: Aldo-keto reductase family 1 member C3, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, RUTIN
Authors:Komoto, J, Yamada, T, Watanabe, K, Takusagawa, F.
Deposit date:2003-12-19
Release date:2004-11-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystal structure of human prostaglandin F synthase (AKR1C3).
Biochemistry, 43, 2004
1KY4
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BU of 1ky4 by Molmil
S-Adenosylhomocysteine hydrolase refined with noncrystallographic restraints
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, S-adenosylhomocysteine hydrolase
Authors:Takata, Y, Takusagawa, F.
Deposit date:2002-02-03
Release date:2002-09-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Catalytic Mechanism of S-adenosylhomocysteine Hydrolase. Site-directed mutagenesis of Asp-130, Lys-185, Asp-189, and Asn-190.
J.Biol.Chem., 277, 2002
1KY5
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BU of 1ky5 by Molmil
D244E mutant S-Adenosylhomocysteine hydrolase refined with noncrystallographic restraints
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 3'-OXO-ADENOSINE, S-adenosylhomocysteine hydrolase
Authors:Takata, Y, Takusagawa, F.
Deposit date:2002-02-03
Release date:2002-09-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Catalytic Mechanism of S-adenosylhomocysteine hydrolase. Site-directed mutagenesis of Asp-130, Lys-185, Asp-189, and Asn-190.
J.Biol.Chem., 277, 2002
2D55
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BU of 2d55 by Molmil
Structural, physical and biological characteristics of RNA.DNA binding agent N8-actinomycin D
Descriptor: ACTINOMYCIN D, DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3')
Authors:Shinomiya, M, Chu, W, Carlson, R.G, Weaver, R.F, Takusagawa, F.
Deposit date:1995-05-01
Release date:1995-10-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of the 2:1 Complex between D(Gaagcttc) and the Anticancer Drug Actinomycin D.
J.Mol.Biol., 225, 1992
1RG9
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BU of 1rg9 by Molmil
S-Adenosylmethionine synthetase complexed with SAM and PPNP
Descriptor: (DIPHOSPHONO)AMINOPHOSPHONIC ACID, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Komoto, J, Yamada, T, Takata, Y, Markham, G.D, Takusagawa, F.
Deposit date:2003-11-11
Release date:2004-03-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the S-adenosylmethionine synthetase ternary complex: a novel catalytic mechanism of s-adenosylmethionine synthesis from ATP and MET.
Biochemistry, 43, 2004
209D
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BU of 209d by Molmil
Structural, physical and biological characteristics of RNA:DNA binding agent N8-actinomycin D
Descriptor: DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3'), N8-ACTINOMYCIN D
Authors:Shinomiya, M, Chu, W, Carlson, R.G, Weaver, R.F, Takusagawa, F.
Deposit date:1995-05-01
Release date:1995-10-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural, Physical, and Biological Characteristics of RNA.DNA Binding Agent N8-Actinomycin D.
Biochemistry, 34, 1995
2F38
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BU of 2f38 by Molmil
Crystal structure of prostaglandin F synathase containing bimatoprost
Descriptor: (5Z)-7-{(1R,2R,3R,5S)-3,5-DIHYDROXY-2-[(1E,3S)-3-HYDROXY-5-PHENYLPENT-1-ENYL]CYCLOPENTYL}-N-ETHYLHEPT-5-ENAMIDE, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Komoto, J, Yamada, T, Watanabe, K, Woodward, D.F, Takusagawa, F.
Deposit date:2005-11-18
Release date:2006-10-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Prostaglandin F2alpha formation from prostaglandin H2 by prostaglandin F synthase (PGFS): crystal structure of PGFS containing bimatoprost.
Biochemistry, 45, 2006
1XWF
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K185N mutated S-adenosylhomocysteine hydrolase
Descriptor: ADENOSINE, Adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Yamada, T, Takata, Y, Komoto, J, Gomi, T, Ogawa, H, Fujioka, M, Takusagawa, F.
Deposit date:2004-11-01
Release date:2005-09-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Catalytic mechanism of S-adenosylhomocysteine hydrolase: Roles of His 54, Asp130, Glu155, Lys185, and Aspl89.
Int.J.Biochem.Cell Biol., 37, 2005

 

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