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PDB: 72 results

1LVA
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Crystal structure of a C-terminal fragment of Moorella thermoacetica elongation factor SelB
Descriptor: SULFATE ION, Selenocysteine-specific elongation factor, YTTRIUM ION
Authors:Selmer, M, Su, X.-D.
Deposit date:2002-05-28
Release date:2002-08-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal structure of an mRNA-binding fragment of Moorella thermoacetica elongation factor SelB.
EMBO J., 21, 2002
4V51
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Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin
Descriptor: 16S ribosomal RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
Authors:Selmer, M, Dunham, C.M, Murphy, F.V, Weixlbaumer, A, Petry, S, Weir, J.R, Kelley, A.C, Ramakrishnan, V.
Deposit date:2006-07-31
Release date:2014-07-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the 70S ribosome complexed with mRNA and tRNA.
Science, 313, 2006
1DD5
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BU of 1dd5 by Molmil
CRYSTAL STRUCTURE OF THERMOTOGA MARITIMA RIBOSOME RECYCLING FACTOR, RRF
Descriptor: ACETIC ACID, RIBOSOME RECYCLING FACTOR
Authors:Selmer, M, Al-Karadaghi, S, Hirokawa, G, Kaji, A, Liljas, A.
Deposit date:1999-11-08
Release date:1999-12-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of Thermotoga maritima ribosome recycling factor: a tRNA mimic.
Science, 286, 1999
1MZP
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BU of 1mzp by Molmil
Structure of the L1 protuberance in the ribosome
Descriptor: 50s ribosomal protein L1P, MAGNESIUM ION, fragment of 23S rRNA
Authors:Nikulin, A, Eliseikina, I, Tishchenko, S, Nevskaya, N, Davydova, N, Platonova, O, Piendl, W, Selmer, M, Liljas, A, Zimmermann, R, Garber, M, Nikonov, S.
Deposit date:2002-10-09
Release date:2003-01-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure of the L1 protuberance in the ribosome.
Nat.Struct.Biol., 10, 2003
4V5A
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BU of 4v5a by Molmil
Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, ...
Authors:Weixlbaumer, A, Petry, S, Dunham, C.M, Selmer, M, Kelley, A.C, Ramakrishnan, V.
Deposit date:2007-06-28
Release date:2014-07-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structure of the ribosome recycling factor bound to the ribosome.
Nat. Struct. Mol. Biol., 14, 2007
1FEU
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BU of 1feu by Molmil
CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA.
Descriptor: 19 NT FRAGMENT OF 5S RRNA, 21 NT FRAGMENT OF 5S RRNA, 50S RIBOSOMAL PROTEIN L25, ...
Authors:Fedorov, R.V, Meshcheryakov, V.A, Gongadze, G.M, Fomenkova, N.P, Nevskaya, N.A, Selmer, M, Laurberg, M, Kristensen, O, Al-Karadaghi, S, Liljas, A, Garber, M.B, Nikonov, S.V.
Deposit date:2000-07-23
Release date:2001-06-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of ribosomal protein TL5 complexed with RNA provides new insights into the CTC family of stress proteins.
Acta Crystallogr.,Sect.D, 57, 2001
4V5F
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BU of 4v5f by Molmil
The structure of the ribosome with elongation factor G trapped in the post-translocational state
Descriptor: 16S ribosomal RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
Authors:Gao, Y.-G, Selmer, M, Dunham, C.M, Weixlbaumer, A, Kelley, A.C, Ramakrishnan, V.
Deposit date:2009-09-01
Release date:2014-07-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The structure of the ribosome with elongation factor G trapped in the posttranslocational state.
Science, 326, 2009
8BB1
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BU of 8bb1 by Molmil
T3 SAM lyase in complex with S-adenosylmethionine synthase
Descriptor: CHLORIDE ION, S-Adenosylmethionine lyase, S-adenosylmethionine synthase
Authors:Triguis, S, Selmer, M.
Deposit date:2022-10-12
Release date:2023-08-23
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Phage T3 overcomes the BREX defense through SAM cleavage and inhibition of SAM synthesis by SAM lyase.
Cell Rep, 42, 2023
6FZB
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BU of 6fzb by Molmil
AadA in complex with ATP, magnesium and streptomycin
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Kanchugal P, S, Selmer, M.
Deposit date:2018-03-14
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural mechanism of AadA, a dual-specificity aminoglycoside adenylyltransferase fromSalmonella enterica.
J. Biol. Chem., 293, 2018
7ODE
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BU of 7ode by Molmil
E. coli 50S ribosome LiCl core particle
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Larsson, D.S.D, Selmer, M.
Deposit date:2021-04-29
Release date:2022-06-01
Last modified:2022-12-14
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Structural Consequences of Deproteinating the 50S Ribosome.
Biomolecules, 12, 2022
6NVM
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BU of 6nvm by Molmil
Crystal structure of 23S rRNA methyltransferase ErmE
Descriptor: SULFATE ION, rRNA adenine N-6-methyltransferase
Authors:Stsiapanava, A, Selmer, M.
Deposit date:2019-02-05
Release date:2019-10-09
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of ErmE - 23S rRNA methyltransferase in macrolide resistance.
Sci Rep, 9, 2019
6SXJ
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Crystal structure of spectinomycin adenyltransferase AAD(9) from Enterococcus faecialis
Descriptor: GLYCEROL, Streptomycin 3''-adenylyltransferase
Authors:Kanchugal P, S, Selmer, M.
Deposit date:2019-09-26
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Recognition of Spectinomycin by Resistance Enzyme ANT(9) from Enterococcus faecalis.
Antimicrob.Agents Chemother., 64, 2020
5LUH
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BU of 5luh by Molmil
AadA E87Q in complex with ATP, calcium and streptomycin
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
Authors:Stern, A.L, Van der Verren, S.E, Selmer, M.
Deposit date:2016-09-08
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural mechanism of AadA, a dual-specificity aminoglycoside adenylyltransferase fromSalmonella enterica.
J.Biol.Chem., 293, 2018
5LPA
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BU of 5lpa by Molmil
AadA E87Q in complex with ATP, calcium and dihydrostreptomycin
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
Authors:Stern, A.L, Van der Verren, S.E, Selmer, M.
Deposit date:2016-08-12
Release date:2018-01-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural mechanism of AadA, a dual-specificity aminoglycoside adenylyltransferase fromSalmonella enterica.
J.Biol.Chem., 293, 2018
4V4R
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BU of 4v4r by Molmil
Crystal structure of the whole ribosomal complex.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Petry, S, Brodersen, D.E, Murphy IV, F.V, Dunham, C.M, Selmer, M, Tarry, M.J, Kelley, A.C, Ramakrishnan, V.
Deposit date:2005-09-30
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (5.9 Å)
Cite:Crystal Structures of the Ribosome in Complex with Release Factors RF1 and RF2 Bound to a Cognate Stop Codon.
Cell(Cambridge,Mass.), 123, 2005
4V4S
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BU of 4v4s by Molmil
Crystal structure of the whole ribosomal complex.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Petry, S, Brodersen, D.E, Murphy IV, F.V, Dunham, C.M, Selmer, M, Tarry, M.J, Kelley, A.C, Ramakrishnan, V.
Deposit date:2005-10-12
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (6.76 Å)
Cite:Crystal Structures of the Ribosome in Complex with Release Factors RF1 and RF2 Bound to a Cognate Stop Codon.
Cell(Cambridge,Mass.), 123, 2005
4V4T
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BU of 4v4t by Molmil
Crystal structure of the whole ribosomal complex with a stop codon in the A-site.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Petry, S, Brodersen, D.E, Murphy IV, F.V, Dunham, C.M, Selmer, M, Tarry, M.J, Kelley, A.C, Ramakrishnan, V.
Deposit date:2005-10-12
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (6.46 Å)
Cite:Crystal Structures of the Ribosome in Complex with Release Factors RF1 and RF2 Bound to a Cognate Stop Codon.
Cell(Cambridge,Mass.), 123, 2005
8P2G
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BU of 8p2g by Molmil
Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state
Descriptor: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 2-[(3~{R},4~{S},5~{S},8~{S},9~{S},10~{S},11~{R},13~{S},14~{S},16~{S})-16-acetyloxy-4,8,10,14-tetramethyl-3,11-bis(oxidanyl)-1,2,3,4,5,6,7,9,11,12,13,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]-5-cyclopentyl-pentanoic acid, ...
Authors:Gonzalez-Lopez, A, Selmer, M.
Deposit date:2023-05-16
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.02 Å)
Cite:Cryo-EM structures of Staphylococcus aureus 70S ribosomes in complex with elongation factor G and fusidic acid
To Be Published
8P2F
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BU of 8p2f by Molmil
Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state
Descriptor: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 2-[(3~{R},4~{S},5~{S},8~{S},9~{S},10~{S},11~{R},13~{S},14~{S},16~{S})-16-acetyloxy-4,8,10,14-tetramethyl-3,11-bis(oxidanyl)-1,2,3,4,5,6,7,9,11,12,13,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]-5-cyclopentyl-pentanoic acid, ...
Authors:Gonzalez-Lopez, A, Selmer, M.
Deposit date:2023-05-16
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.44 Å)
Cite:Cryo-EM structures of Staphylococcus aureus 70S ribosomes in complex with elongation factor G and fusidic acid
To Be Published
8P2H
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BU of 8p2h by Molmil
Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state
Descriptor: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
Authors:Gonzalez-Lopez, A, Selmer, M.
Deposit date:2023-05-16
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric hybrid state
To Be Published
8P17
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BU of 8p17 by Molmil
E167K RF2 on E. coli 70S release complex with UGG (Structure II)
Descriptor: 1,4-DIAMINOBUTANE, 16S RNA, 23S rRNA, ...
Authors:Pundir, S, Larsson, D.S.D, Selmer, M, Sanyal, S.
Deposit date:2023-05-11
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:The compensatory mechanism of a naturally evolved E167K RF2 counteracting the loss of RF1 in bacteria
To Be Published
8P16
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E167K RF2 on E. coli 70S release complex with UGG (Structure I)
Descriptor: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ...
Authors:Pundir, S, Larsson, D.S.D, Selmer, M, Sanyal, S.
Deposit date:2023-05-11
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:The compensatory mechanism of a naturally evolved E167K RF2 counteracting the loss of RF1 in bacteria
To Be Published
8P18
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BU of 8p18 by Molmil
E167K RF2 on E. coli 70S release complex with UGG (Structure III)
Descriptor: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ...
Authors:Pundir, S, Larsson, D.S.D, Selmer, M, Sanyal, S.
Deposit date:2023-05-11
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:The compensatory mechanism of a naturally evolved E167K RF2 counteracting the loss of RF1 in bacteria
To Be Published
6Y8X
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Structure of Atlantic Herring (Clupea Harengus) Phosphoglucomutase 5 (PGM5)
Descriptor: CALCIUM ION, Phosphoglucomutase 5, SODIUM ION
Authors:Gustafsson, R, Eckhard, U, Selmer, M.
Deposit date:2020-03-06
Release date:2020-12-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure and Characterization of Phosphoglucomutase 5 from Atlantic and Baltic Herring-An Inactive Enzyme with Intact Substrate Binding.
Biomolecules, 10, 2020
6Y8Z
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Structure of Baltic Herring (Clupea Harengus) Phosphoglucomutase 5 (PGM5)
Descriptor: ACETATE ION, CALCIUM ION, GLYCEROL, ...
Authors:Gustafsson, R, Eckhard, U, Selmer, M.
Deposit date:2020-03-06
Release date:2020-12-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure and Characterization of Phosphoglucomutase 5 from Atlantic and Baltic Herring-An Inactive Enzyme with Intact Substrate Binding.
Biomolecules, 10, 2020

 

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