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PDB: 236 results

6I25
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BU of 6i25 by Molmil
Flavin Analogue Sheds Light on Light-Oxygen-Voltage Domain Mechanism
Descriptor: 1-deoxy-1-(7,8-dimethyl-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-5-O-phosphono-D-ribitol, Aureochrome1-like protein, CHLORIDE ION, ...
Authors:Rizkallah, P.J, Kalvaitis, M.E.
Deposit date:2018-10-31
Release date:2019-06-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:A Noncanonical Chromophore Reveals Structural Rearrangements of the Light-Oxygen-Voltage Domain upon Photoactivation.
Biochemistry, 58, 2019
6TMO
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Structure determination of an enhanced affinity TCR, a24b17, in complex with HLA-A*02:01 presenting a MART-1 peptide, EAAGIGILTV
Descriptor: 1,2-ETHANEDIOL, Alpha chain of engineered high affinity T-cell receptor, Beta chain of high affinity engineered T-cell receptor, ...
Authors:Rizkallah, P.J, Cole, D.K.
Deposit date:2019-12-05
Release date:2020-10-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular Rules Underpinning Enhanced Affinity Binding of Human T Cell Receptors Engineered for Immunotherapy.
Mol Ther Oncolytics, 18, 2020
7B4Q
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BU of 7b4q by Molmil
Structure of a cold active HSL family esterase reveals mechanisms of low temperature adaptation and substrate specificity
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Rizkallah, P.J, Jones, D.D, Noby, N, Auhim, H.
Deposit date:2020-12-02
Release date:2021-12-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structure and in silico simulations of a cold-active esterase reveals its prime cold-adaptation mechanism.
Open Biology, 11, 2021
8OFT
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BU of 8oft by Molmil
Human adenovirus type 32 fiber-knob protein
Descriptor: Fiber
Authors:Rizkallah, P.J, Parker, A.L, Mundy, R.M, Baker, A.T.
Deposit date:2023-03-16
Release date:2023-09-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Broad sialic acid usage amongst species D human adenovirus.
Npj Viruses, 1, 2023
6I22
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BU of 6i22 by Molmil
Flavin Analogue Sheds Light on Light-Oxygen-Voltage Domain Mechanism
Descriptor: Aureochrome1-like protein, FLAVIN MONONUCLEOTIDE
Authors:Rizkallah, P.J, Kalvaitis, M.E, Allemann, R.K, Mart, R.J, Johnson, L.A.
Deposit date:2018-10-31
Release date:2019-05-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:A Noncanonical Chromophore Reveals Structural Rearrangements of the Light-Oxygen-Voltage Domain upon Photoactivation.
Biochemistry, 58, 2019
2BCK
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BU of 2bck by Molmil
Crystal Structure of HLA-A*2402 Complexed with a telomerase peptide
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
Authors:Rizkallah, P.J, Jakobsen, B.K, Cole, D.K, Gao, G.F.
Deposit date:2005-10-19
Release date:2006-01-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of HLA-A*2402 complexed with a telomerase peptide.
Eur.J.Immunol., 36, 2006
2F54
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BU of 2f54 by Molmil
Directed evolution of human T cell receptor CDR2 residues by phage display dramatically enhances affinity for cognate peptide-MHC without increasing apparent cross-reactivity
Descriptor: Beta-2-microglobulin, Cancer/testis antigen 1B, HLA class I histocompatibility antigen, ...
Authors:Rizkallah, P.J, Jakobsen, B.K, Dunn, S.M, Sami, M.
Deposit date:2005-11-25
Release date:2006-04-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Directed evolution of human T cell receptor CDR2 residues by phage display dramatically enhances affinity for cognate peptide-MHC without increasing apparent cross-reactivity.
Protein Sci., 15, 2006
4U1M
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BU of 4u1m by Molmil
HLA class I micropolymorphisms determine peptide-HLA landscape and dictate differential HIV-1 escape through identical epitopes
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
Authors:Rizkallah, P.J, Cole, D.K, Fuller, A, Sewell, A.K.
Deposit date:2014-07-15
Release date:2015-04-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:A molecular switch in immunodominant HIV-1-specific CD8 T-cell epitopes shapes differential HLA-restricted escape.
Retrovirology, 12, 2015
4U1H
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BU of 4u1h by Molmil
HLA class I micropolymorphisms determine peptide-HLA landscape and dictate differential HIV-1 escape through identical epitopes
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GAG protein, ...
Authors:Rizkallah, P.J, Cole, D.K, Fuller, A, Sewell, A.K.
Deposit date:2014-07-15
Release date:2015-04-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:A molecular switch in immunodominant HIV-1-specific CD8 T-cell epitopes shapes differential HLA-restricted escape.
Retrovirology, 12, 2015
4U1L
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BU of 4u1l by Molmil
HLA class I micropolymorphisms determine peptide-HLA landscape and dictate differential HIV-1 escape through identical epitopes
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
Authors:Rizkallah, P.J, Cole, D.K, Fuller, A, Sewell, A.K.
Deposit date:2014-07-15
Release date:2015-04-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:A molecular switch in immunodominant HIV-1-specific CD8 T-cell epitopes shapes differential HLA-restricted escape.
Retrovirology, 12, 2015
6G3J
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BU of 6g3j by Molmil
MHC A02 Allele presenting MTSAIGILVP
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
Authors:Rizkallah, P.J, Sewell, A.K.
Deposit date:2018-03-26
Release date:2019-02-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Peptide Super-Agonist Enhances T-Cell Responses to Melanoma.
Front Immunol, 10, 2019
5N1Y
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BU of 5n1y by Molmil
HLA-A02 carrying MVWGPDPLYV
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
Authors:Rizkallah, P.J, Bulek, A.M, Cole, D.K, Sewell, A.K.
Deposit date:2017-02-06
Release date:2017-02-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Hotspot autoimmune T cell receptor binding underlies pathogen and insulin peptide cross-reactivity.
J. Clin. Invest., 126, 2016
6SMS
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BU of 6sms by Molmil
Vegetative Insecticidal Protein 1 (Vip1Ac1) from Bacillus thuringiensis
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, SULFATE ION, ...
Authors:Rizkallah, P.J, Al-Maslookhi, H.S, Berry, C, Jones, D.
Deposit date:2019-08-22
Release date:2021-02-10
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Bacillus thuringiensis insecticidal protein 1Ac, VIP1Ac
Not Published
6QLB
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BU of 6qlb by Molmil
Calpain small subunit 1, RNA-binding protein Hfq
Descriptor: 1,2-ETHANEDIOL, 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, CALCIUM ION, ...
Authors:Rizkallah, P.J, Cresser-Brown, J.O.
Deposit date:2019-01-31
Release date:2020-02-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Calpain small subunit 1, RNA-binding protein Hfq
Acta Crystallogr.,Sect.F, 2020
6R0E
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BU of 6r0e by Molmil
Structure of F11TCR in complex with DR1 MHC Class II presenting PKYVKQNTLKLAT
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, F11-TCR Alpha Chain, ...
Authors:Rizkallah, P.J, Greenshields-Watson, A.L.
Deposit date:2019-03-12
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:CD4+T Cells Recognize Conserved Influenza A Epitopes through Shared Patterns of V-Gene Usage and Complementary Biochemical Features.
Cell Rep, 32, 2020
6R2L
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BU of 6r2l by Molmil
NYBR1-A2-SLSKILDTV
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-2-microglobulin, ...
Authors:Rizkallah, P.J, Cole, D.K, Sami, M.
Deposit date:2019-03-18
Release date:2020-02-26
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:NYBR1-A2-SLSKILDTV
To Be Published
4U1I
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BU of 4u1i by Molmil
HLA class I micropolymorphisms determine peptide-HLA landscape and dictate differential HIV-1 escape through identical epitopes
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GAG protein, ...
Authors:Rizkallah, P.J, Cole, D.K, Fuller, A, Sewell, A.K.
Deposit date:2014-07-15
Release date:2015-04-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:A molecular switch in immunodominant HIV-1-specific CD8 T-cell epitopes shapes differential HLA-restricted escape.
Retrovirology, 12, 2015
6FUQ
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BU of 6fuq by Molmil
F11 T-Cell Receptor Recognising PKYVKQNTLKLAT Peptide Presented by HLA-DR*0101
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Human F11 T-Cell Receptor, ...
Authors:Rizkallah, P.J, Cole, D.K.
Deposit date:2018-02-27
Release date:2018-04-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:In Silicoand Structural Analyses Demonstrate That Intrinsic Protein Motions Guide T Cell Receptor Complementarity Determining Region Loop Flexibility.
Front Immunol, 9, 2018
5NME
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BU of 5nme by Molmil
868 TCR in complex with HLA A02 presenting SLYNTVATL
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
Authors:Rizkallah, P.J, Cole, D.K, Fuller, A, Sewell, A.K.
Deposit date:2017-04-05
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Dual Molecular Mechanisms Govern Escape at Immunodominant HLA A2-Restricted HIV Epitope.
Front Immunol, 8, 2017
5NMH
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BU of 5nmh by Molmil
HLA A02 presenting SLYNTIATL
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
Authors:Rizkallah, P.J, Cole, D.K, Fuller, A, Sewell, A.K.
Deposit date:2017-04-05
Release date:2017-11-15
Last modified:2017-12-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Dual Molecular Mechanisms Govern Escape at Immunodominant HLA A2-Restricted HIV Epitope.
Front Immunol, 8, 2017
6FUR
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BU of 6fur by Molmil
F11 T-Cell Receptor Recognising PKYVKQNTLKLAT Peptide Presented by HLA-DR*0101
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Human F11 T-Cell Receptor, ...
Authors:Rizkallah, P.J, Cole, D.K.
Deposit date:2018-02-27
Release date:2018-04-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:In Silicoand Structural Analyses Demonstrate That Intrinsic Protein Motions Guide T Cell Receptor Complementarity Determining Region Loop Flexibility.
Front Immunol, 9, 2018
5NMF
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BU of 5nmf by Molmil
868 TCR in complex with HLA A02 presenting SLYNTIATL
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
Authors:Rizkallah, P.J, Cole, D.K, Fuller, A, Sewell, A.K.
Deposit date:2017-04-05
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Dual Molecular Mechanisms Govern Escape at Immunodominant HLA A2-Restricted HIV Epitope.
Front Immunol, 8, 2017
5NQ1
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BU of 5nq1 by Molmil
Porcine (Sus scrofa) Major Histocompatibility Complex, class I, with human beta2 micro globulin, presenting DFEREGYSL
Descriptor: 1,2-ETHANEDIOL, ASP-PHE-GLU-ARG-GLU-GLY-TYR-SER-LEU, Beta-2-microglobulin, ...
Authors:Rizkallah, P.J, Tungatt, K, Sewell, A.K.
Deposit date:2017-04-19
Release date:2018-04-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Induction of influenza-specific local CD8 T-cells in the respiratory tract after aerosol delivery of vaccine antigen or virus in the Babraham inbred pig.
Plos Pathog., 14, 2018
5NMD
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BU of 5nmd by Molmil
868 TCR Specific for HLA A02 presenting HIV Epitope SLYNTVATL
Descriptor: 1,2-ETHANEDIOL, Human T-cell Receptor, beta chain, ...
Authors:Rizkallah, P.J, Cole, D.K, Fuller, A, Sewell, A.K.
Deposit date:2017-04-05
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Dual Molecular Mechanisms Govern Escape at Immunodominant HLA A2-Restricted HIV Epitope.
Front Immunol, 8, 2017
5NMG
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BU of 5nmg by Molmil
868 TCR in complex with HLA A02 presenting SLYFNTIAVL
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
Authors:Rizkallah, P.J, Cole, D.K, Fuller, A, Sewell, A.K.
Deposit date:2017-04-05
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Dual Molecular Mechanisms Govern Escape at Immunodominant HLA A2-Restricted HIV Epitope.
Front Immunol, 8, 2017

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