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PDB: 153 results

5KTZ
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BU of 5ktz by Molmil
expanded poliovirus in complex with VHH 12B
Descriptor: Genome polyprotein, VHH 12B, VP1, ...
Authors:Strauss, M, Schotte, L, Filman, D.J, Hogle, J.M.
Deposit date:2016-07-12
Release date:2016-11-02
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cryo-electron Microscopy Structures of Expanded Poliovirus with VHHs Sample the Conformational Repertoire of the Expanded State.
J. Virol., 91, 2017
7QFB
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BU of 7qfb by Molmil
Crystal structure of Protein Phosphatase 1 in complex with PP1-binding peptide from PTG
Descriptor: GLYCEROL, MANGANESE (II) ION, Protein phosphatase 1 regulatory subunit 3C, ...
Authors:Semrau, M.S, Storici, P, Lolli, G.
Deposit date:2021-12-05
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Molecular architecture of the glycogen- committed PP1/PTG holoenzyme.
Nat Commun, 13, 2022
7QFA
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BU of 7qfa by Molmil
Monoclinic crystal structure of PTG CBM21 in complex with beta-cyclodextrin
Descriptor: Cycloheptakis-(1-4)-(alpha-D-glucopyranose), GLYCEROL, Protein phosphatase 1 regulatory subunit 3C
Authors:Semrau, M.S, Storici, P, Lolli, G.
Deposit date:2021-12-05
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular architecture of the glycogen- committed PP1/PTG holoenzyme.
Nat Commun, 13, 2022
7QM2
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BU of 7qm2 by Molmil
Crystal structure of the PP1/PTG/beta-cyclodextrin ternary complex
Descriptor: Cycloheptakis-(1-4)-(alpha-D-glucopyranose), Protein phosphatase 1 regulatory subunit 3C, Serine/threonine-protein phosphatase PP1-alpha catalytic subunit
Authors:Semrau, M.S, Storici, P, Lolli, G.
Deposit date:2021-12-20
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.685 Å)
Cite:Molecular architecture of the glycogen- committed PP1/PTG holoenzyme.
Nat Commun, 13, 2022
7QF7
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BU of 7qf7 by Molmil
Orthorhombic crystal structure of PTG CBM21 in complex with beta-cyclodextrin
Descriptor: Cycloheptakis-(1-4)-(alpha-D-glucopyranose), Protein phosphatase 1 regulatory subunit 3C, SODIUM ION
Authors:Semrau, M.S, Storici, P, Lolli, G.
Deposit date:2021-12-04
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Molecular architecture of the glycogen- committed PP1/PTG holoenzyme.
Nat Commun, 13, 2022
8B5A
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BU of 8b5a by Molmil
Human BRD3 bromodomain 2 in complex with a H4 peptide containing ApmTri (H4K20ApmTri)
Descriptor: Bromodomain-containing protein 3, H4K20ApmTri
Authors:Braun, M.B, Bartlick, N, Stehle, T.
Deposit date:2022-09-22
Release date:2023-01-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Synthesis, Biochemical Characterization, and Genetic Encoding of a 1,2,4-Triazole Amino Acid as an Acetyllysine Mimic for Bromodomains of the BET Family.
Angew.Chem.Int.Ed.Engl., 62, 2023
8B5B
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BU of 8b5b by Molmil
Human BRD4 bromdomain 1 in complex with a H4 peptide containing acetyl lysine and ApmTri (H4K5acK8ApmTri)
Descriptor: Bromodomain-containing protein 4, DI(HYDROXYETHYL)ETHER, H4K5acK8ApmTri
Authors:Braun, M.B, Bartlick, N, Stehle, T.
Deposit date:2022-09-22
Release date:2023-01-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Synthesis, Biochemical Characterization, and Genetic Encoding of a 1,2,4-Triazole Amino Acid as an Acetyllysine Mimic for Bromodomains of the BET Family.
Angew.Chem.Int.Ed.Engl., 62, 2023
8B5C
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BU of 8b5c by Molmil
Human BRD4 bromdomain 1 in complex with a H4 peptide containing ApmTri (H4K5/8ApmTri)
Descriptor: Bromodomain-containing protein 4, H4K5/8ApmTri
Authors:Braun, M.B, Bartlick, N, Stehle, T.
Deposit date:2022-09-22
Release date:2023-01-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Synthesis, Biochemical Characterization, and Genetic Encoding of a 1,2,4-Triazole Amino Acid as an Acetyllysine Mimic for Bromodomains of the BET Family.
Angew.Chem.Int.Ed.Engl., 62, 2023
1BEM
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BU of 1bem by Molmil
INTERACTION BETWEEN PROXIMAL AND DISTALS REGIONS OF CYTOCHROME C PEROXIDASE
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kraut, M.A.M.J.
Deposit date:1998-05-16
Release date:1998-10-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Interaction between Proximal and Distals Regions of Cytochrome C Peroxidase
To be Published
8PKU
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BU of 8pku by Molmil
Kelch domain of KEAP1 in complex with ortho-dimethylbenzene linked cyclic peptide 3 (ortho-WRCDEETGEC).
Descriptor: (2-methylphenyl)methanol, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Braun, M.B, Bischof, L, Hartmann, M.D.
Deposit date:2023-06-27
Release date:2023-11-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Computational Prediction of Cyclic Peptide Structural Ensembles and Application to the Design of Keap1 Binders.
J.Chem.Inf.Model., 63, 2023
6SWA
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BU of 6swa by Molmil
Mus musculus brain neocortex ribosome 60S bound to Ebp1
Descriptor: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Kraushar, M.L, Sprink, T.
Deposit date:2019-09-20
Release date:2020-09-30
Last modified:2021-02-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Protein Synthesis in the Developing Neocortex at Near-Atomic Resolution Reveals Ebp1-Mediated Neuronal Proteostasis at the 60S Tunnel Exit.
Mol.Cell, 81, 2021
8PKW
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BU of 8pkw by Molmil
Kelch domain of KEAP1 in complex with a ortho-dimethylbenzene linked cyclic peptide 5 (ortho-WRCDPETaEC).
Descriptor: (2-methylphenyl)methanol, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Braun, M.B, Bischof, L, Hartmann, M.D.
Deposit date:2023-06-27
Release date:2023-11-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Computational Prediction of Cyclic Peptide Structural Ensembles and Application to the Design of Keap1 Binders.
J.Chem.Inf.Model., 63, 2023
8PKX
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BU of 8pkx by Molmil
Kelch domain of KEAP1 in complex with a ortho-dimethylbenzene linked cyclic peptide 11 (ortho-WRCNPETaEC).
Descriptor: (2-methylphenyl)methanol, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Braun, M.B, Bischof, L, Hartmann, M.D.
Deposit date:2023-06-27
Release date:2023-11-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Computational Prediction of Cyclic Peptide Structural Ensembles and Application to the Design of Keap1 Binders.
J.Chem.Inf.Model., 63, 2023
8PKV
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BU of 8pkv by Molmil
Kelch domain of KEAP1 in complex with a ortho-dimethylbenzene linked cyclic peptide 4 (ortho-WRCDEETGEC).
Descriptor: (2-methylphenyl)methanol, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Braun, M.B, Bischof, L, Hartmann, M.D.
Deposit date:2023-06-27
Release date:2023-11-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Computational Prediction of Cyclic Peptide Structural Ensembles and Application to the Design of Keap1 Binders.
J.Chem.Inf.Model., 63, 2023
5KU0
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BU of 5ku0 by Molmil
expanded poliovirus in complex with VHH 17B
Descriptor: VHH 17B, VP1, VP2, ...
Authors:Strauss, M, Schotte, L, Filman, D.J, Hogle, J.M.
Deposit date:2016-07-12
Release date:2016-11-02
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-electron Microscopy Structures of Expanded Poliovirus with VHHs Sample the Conformational Repertoire of the Expanded State.
J. Virol., 91, 2017
5KU2
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BU of 5ku2 by Molmil
expanded poliovirus in complex with VHH 7A
Descriptor: VHH 7A, VP1, VP2, ...
Authors:Strauss, M, Schotte, L, Filman, D.J, Hogle, J.M.
Deposit date:2016-07-12
Release date:2016-11-02
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Cryo-electron Microscopy Structures of Expanded Poliovirus with VHHs Sample the Conformational Repertoire of the Expanded State.
J. Virol., 91, 2017
5KWL
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BU of 5kwl by Molmil
expanded poliovirus in complex with VHH 10E
Descriptor: VHH 10E, VP1, VP2, ...
Authors:Strauss, M, Schotte, L, Filman, D.J, Hogle, J.M.
Deposit date:2016-07-18
Release date:2016-11-02
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Cryo-electron Microscopy Structures of Expanded Poliovirus with VHHs Sample the Conformational Repertoire of the Expanded State.
J. Virol., 91, 2017
6QJU
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BU of 6qju by Molmil
Crystal structure of human Bromodomain containing protein 3 (BRD3) in complex with 3-bromo-1H-indazol-5-amine
Descriptor: 1,2-ETHANEDIOL, 3-bromanyl-2~{H}-indazol-5-amine, Bromodomain-containing protein 3, ...
Authors:Braun, M.B, Stehle, T, Heidrich, J.
Deposit date:2019-01-25
Release date:2020-02-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.202 Å)
Cite:Br-O-modomain (BRD3) halogen binding to a small molecule
To Be Published
7P16
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BU of 7p16 by Molmil
Structure of caspase-3 cleaved rXKR9 in complex with a sybody at 4.3A
Descriptor: DIUNDECYL PHOSPHATIDYL CHOLINE, Sybody, XK-related protein
Authors:Straub, M.S, Sawicka, M, Dutzler, R.
Deposit date:2021-07-01
Release date:2021-07-28
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cryo-EM structures of the caspase activated protein XKR9 involved in apoptotic lipid scrambling.
Elife, 10, 2021
7P14
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BU of 7p14 by Molmil
Structure of full-length rXKR9 in complex with a sybody at 3.66A
Descriptor: DIUNDECYL PHOSPHATIDYL CHOLINE, O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine, Sybody, ...
Authors:Straub, M.S, Sawicka, M, Dutzler, R.
Deposit date:2021-07-01
Release date:2021-07-28
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:Cryo-EM structures of the caspase activated protein XKR9 involved in apoptotic lipid scrambling.
Elife, 10, 2021
3J8F
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BU of 3j8f by Molmil
Cryo-EM reconstruction of poliovirus-receptor complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Capsid protein VP1, ...
Authors:Strauss, M, Filman, D.J, Belnap, D.M, Cheng, N, Noel, R.T, Hogle, J.M.
Deposit date:2014-10-20
Release date:2015-02-11
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Nectin-Like Interactions between Poliovirus and Its Receptor Trigger Conformational Changes Associated with Cell Entry.
J.Virol., 89, 2015
3ZRY
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BU of 3zry by Molmil
Rotor architecture in the F(1)-c(10)-ring complex of the yeast F-ATP synthase
Descriptor: ATP SYNTHASE CATALYTIC SECTOR F1 EPSILON SUBUNIT, ATP SYNTHASE SUBUNIT 9, MITOCHONDRIAL, ...
Authors:Giraud, M.-F, Dautant, A.
Deposit date:2011-06-21
Release date:2012-01-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (6.5 Å)
Cite:Rotor Architecture in the Yeast and Bovine F(1)-C-Ring Complexes of F-ATP Synthase.
J.Struct.Biol., 177, 2012
3J9F
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BU of 3j9f by Molmil
Poliovirus complexed with soluble, deglycosylated poliovirus receptor (Pvr) at 4 degrees C
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PALMITIC ACID, ...
Authors:Strauss, M, Filman, D.J, Belnap, D.M, Cheng, N, Noel, R.T, Hogle, J.M.
Deposit date:2015-01-15
Release date:2015-02-11
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Nectin-Like Interactions between Poliovirus and Its Receptor Trigger Conformational Changes Associated with Cell Entry.
J.Virol., 89, 2015
3JBE
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BU of 3jbe by Molmil
Complex of poliovirus with VHH PVSS8A
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Strauss, M, Schotte, L, Thys, B, Filman, D.J, Hogle, J.M.
Deposit date:2015-08-26
Release date:2016-01-27
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Five of Five VHHs Neutralizing Poliovirus Bind the Receptor-Binding Site.
J.Virol., 90, 2016
3JBF
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BU of 3jbf by Molmil
Complex of poliovirus with VHH PVSP19B
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Strauss, M, Schotte, L, Thys, B, Filman, D.J, Hogle, J.M.
Deposit date:2015-08-26
Release date:2016-01-27
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Five of Five VHHs Neutralizing Poliovirus Bind the Receptor-Binding Site.
J.Virol., 90, 2016

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