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PDB: 116 results

7QI9
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BU of 7qi9 by Molmil
Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 7.2 in complex with UDP
Descriptor: Glucosyl-3-phosphoglycerate synthase, URIDINE-5'-DIPHOSPHATE
Authors:Silva, A, Nunes-Costa, D, Barbosa Pereira, P.J, Macedo-Ribeiro, S.
Deposit date:2021-12-14
Release date:2022-12-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 7.2 in complex with UDP
To Be Published
7QIB
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BU of 7qib by Molmil
Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 8.5 in complex with UDP
Descriptor: CHLORIDE ION, Glucosyl-3-phosphoglycerate synthase, MAGNESIUM ION, ...
Authors:Silva, A, Nunes-Costa, D, Barbosa Pereira, P.J, Macedo-Ribeiro, S.
Deposit date:2021-12-14
Release date:2022-12-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 8.5 in complex with UDP
To Be Published
4CHU
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BU of 4chu by Molmil
E. coli IscR-DNA complex
Descriptor: HTH-TYPE TRANSCRIPTIONAL REGULATOR ISCR, HYA PROMOTER FRAGMENT
Authors:Santos, J.A, Macedo-Ribeiro, S, Pereira, P.J.B.
Deposit date:2013-12-04
Release date:2014-05-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.489 Å)
Cite:The Unique Regulation of Iron-Sulfur Cluster Biogenesis in a Gram-Positive Bacterium.
Proc.Natl.Acad.Sci.USA, 111, 2014
5NHU
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BU of 5nhu by Molmil
HUMAN ALPHA THROMBIN COMPLEXED WITH ANOPHELES GAMBIAE cE5 ANTICOAGULANT
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, AGAP008004-PA, Prothrombin, ...
Authors:Ripoll-Rozada, J, Pereira, P.J.B.
Deposit date:2017-03-22
Release date:2017-06-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Functional analyses yield detailed insight into the mechanism of thrombin inhibition by the antihemostatic salivary protein cE5 from Anopheles gambiae.
J. Biol. Chem., 292, 2017
5L6N
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BU of 5l6n by Molmil
Disulfated madanin-thrombin complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Prothrombin, SODIUM ION, ...
Authors:Ripoll-Rozada, J, Pereira, P.J.B.
Deposit date:2016-05-30
Release date:2017-03-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.627 Å)
Cite:Tyrosine sulfation modulates activity of tick-derived thrombin inhibitors.
Nat Chem, 9, 2017
1TZ8
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BU of 1tz8 by Molmil
The monoclinic crystal structure of transthyretin in complex with diethylstilbestrol
Descriptor: ACETATE ION, CARBONATE ION, DIETHYLSTILBESTROL, ...
Authors:Morais-de-Sa, E.M, Pereira, P.J.B, Saraiva, M.J, Damas, A.M.
Deposit date:2004-07-09
Release date:2004-10-12
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The crystal structure of transthyretin in complex with diethylstilbestrol: a promising template for the design of amyloid inhibitors
J.Biol.Chem., 279, 2004
1TT6
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BU of 1tt6 by Molmil
The orthorhombic crystal structure of transthyretin in complex with diethylstilbestrol
Descriptor: DIETHYLSTILBESTROL, GLYCEROL, SULFATE ION, ...
Authors:Morais-de-Sa, E.M, Pereira, P.J.B, Saraiva, M.J, Damas, A.M.
Deposit date:2004-06-22
Release date:2004-10-12
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of transthyretin in complex with diethylstilbestrol: a promising template for the design of amyloid inhibitors
J.Biol.Chem., 279, 2004
5OHC
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BU of 5ohc by Molmil
Crystal structure of Mycolicibacterium hassiacum glucosylglycerate hydrolase (MhGgH) in complex with glycerol
Descriptor: GLYCEROL, Hydrolase
Authors:Cereija, T.B, Macedo-Ribeiro, S, Pereira, P.J.B.
Deposit date:2017-07-14
Release date:2018-08-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structural characterization of a glucosylglycerate hydrolase provides insights into the molecular mechanism of mycobacterial recovery from nitrogen starvation.
Iucrj, 6, 2019
5ONT
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BU of 5ont by Molmil
Crystal structure of Mycolicibacterium hassiacum glucosylglycerate hydrolase(MhGgH) E419A variant in complex with glucosylglycerol
Descriptor: 1,3-dihydroxypropan-2-yl alpha-D-glucopyranoside, GLYCEROL, Uncharacterized protein
Authors:Cereija, T.B, Macedo-Ribeiro, S, Pereira, P.J.B.
Deposit date:2017-08-04
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The structural characterization of a glucosylglycerate hydrolase provides insights into the molecular mechanism of mycobacterial recovery from nitrogen starvation.
Iucrj, 6, 2019
3U8O
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BU of 3u8o by Molmil
Human thrombin complexed with D-Phe-Pro-D-Arg-D-Thr
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Figueiredo, A.C, Clement, C.C, Philipp, M, Pereira, P.J.B.
Deposit date:2011-10-17
Release date:2012-05-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Rational design and characterization of D-Phe-Pro-D-Arg-derived direct thrombin inhibitors.
Plos One, 7, 2012
5TNY
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BU of 5tny by Molmil
HTRA2 G399S mutant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Serine protease HTRA2, mitochondrial
Authors:Merski, M, Barbosa Pereira, P.J, Macedo-Ribeiro, S.
Deposit date:2016-10-15
Release date:2017-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular motion regulates the activity of the Mitochondrial Serine Protease HtrA2.
Cell Death Dis, 8, 2017
5TO0
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BU of 5to0 by Molmil
HTRA2 S276C mutant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Serine protease HTRA2, mitochondrial
Authors:Merski, M, Barbosa Pereira, P.J, Macedo-Ribeiro, S.
Deposit date:2016-10-15
Release date:2017-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular motion regulates the activity of the Mitochondrial Serine Protease HtrA2.
Cell Death Dis, 8, 2017
5TO1
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BU of 5to1 by Molmil
HtrA2 exposed (L266R, F303A) mutant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Serine protease HTRA2, ...
Authors:Merski, M, Barbosa Pereira, P.J, Macedo-Ribeiro, S.
Deposit date:2016-10-15
Release date:2017-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Molecular motion regulates the activity of the Mitochondrial Serine Protease HtrA2.
Cell Death Dis, 8, 2017
4CIC
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BU of 4cic by Molmil
T. potens IscR
Descriptor: HEXA-ALANINE PEPTIDE, SODIUM ION, TRANSCRIPTIONAL REGULATOR, ...
Authors:Santos, J.A, Macedo-Ribeiro, S, Pereira, P.J.B.
Deposit date:2013-12-06
Release date:2014-05-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Unique Regulation of Iron-Sulfur Cluster Biogenesis in a Gram-Positive Bacterium.
Proc.Natl.Acad.Sci.USA, 111, 2014
5TNZ
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BU of 5tnz by Molmil
HtrA2 S142D mutant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, SODIUM ION, Serine protease HTRA2, ...
Authors:Macedo-Ribeiro, S, Merski, M, Pereira, P.J.B.
Deposit date:2016-10-15
Release date:2017-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Molecular motion regulates the activity of the Mitochondrial Serine Protease HtrA2.
Cell Death Dis, 8, 2017
1T31
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BU of 1t31 by Molmil
A Dual Inhibitor of the Leukocyte Proteases Cathepsin G and Chymase with Therapeutic Efficacy in Animals Models of Inflammation
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-[3-({METHYL[1-(2-NAPHTHOYL)PIPERIDIN-4-YL]AMINO}CARBONYL)-2-NAPHTHYL]-1-(1-NAPHTHYL)-2-OXOETHYLPHOSPHONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:de Garavilla, L, Greco, M.N, Giardino, E.C, Wells, G.I, Haertlein, B.J, Kauffman, J.A, Corcoran, T.W, Derian, C.K, Eckardt, A.J, Abraham, W.M, Sukumar, N, Chen, Z, Pineda, A.O, Mathews, F.S, Di Cera, E, Andrade-Gordon, P, Damiano, B.P, Maryanoff, B.E, Pereira, P.J.B, Wang, Z.M, Rubin, H, Huber, R, Bode, W, Schechter, N.M, Strobl, S.
Deposit date:2004-04-23
Release date:2005-03-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A novel, potent dual inhibitor of the leukocyte proteases cathepsin G and chymase: molecular mechanisms and anti-inflammatory activity in vivo.
J.Biol.Chem., 280, 2005

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