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PDB: 9 results

1N4B
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BU of 1n4b by Molmil
Solution Structure of the undecamer CGAAAC*TTTCG
Descriptor: 5'-D(*CP*GP*AP*AP*AP*CP*TP*TP*TP*CP*G)-3', 5'-D(*CP*GP*AP*AP*AP*D00*TP*TP*TP*CP*G)-3'
Authors:Webba da Silva, M, Noronha, A.M, Noll, D.M, Miller, P.S, Colvin, O.M, Gamcsik, M.P.
Deposit date:2002-10-30
Release date:2003-11-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of a DNA Duplex Containing Mispair-Aligned N4C-Ethyl-N4C Interstrand Cross-Linked Cytosines
Biochemistry, 41, 2002
4JRD
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Crystal structure of the parallel double-stranded helix of poly(A) RNA
Descriptor: AMMONIUM ION, RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')
Authors:Safaee, N, Noronha, A.M, Kozlov, G, Rodionov, D, Wilds, C.J, Sheldrick, G.M, Gehring, K.
Deposit date:2013-03-21
Release date:2013-06-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structure of the parallel duplex of poly(A) RNA: evaluation of a 50 year-old prediction.
Angew.Chem.Int.Ed.Engl., 52, 2013
5TGG
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Solution structure of parallel stranded adenosine duplex
Descriptor: RNA/DNA (5'-D(P*T)-R(*(A2M)P*(A2M)P*(A2M)P*(A2M))-D(P*A)-R(P*(A2M)P*(A2M)P*(A2M))-3')
Authors:Denisov, A, Noronha, A, Gehring, K, Wilds, C.
Deposit date:2016-09-27
Release date:2017-08-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Influence of nucleotide modifications at the C2' position on the Hoogsteen base-paired parallel-stranded duplex of poly(A) RNA.
Nucleic Acids Res., 45, 2017
1XCI
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BU of 1xci by Molmil
Mispair Aligned N3T-Butyl-N3T Interstrand Crosslink
Descriptor: 5'-D(*CP*GP*AP*AP*AP*(TTM)P*TP*TP*TP*CP*G)-3'
Authors:da Silva, M.W, Bierbryer, R.G, Wilds, C.J, Noronha, A.M, Colvin, O.M, Miller, P.S, Gamcsik, M.P.
Deposit date:2004-09-02
Release date:2005-08-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Intrastrand base-stacking buttresses widening of major groove in interstrand cross-linked B-DNA.
Bioorg.Med.Chem., 13, 2005
1S37
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Accomodation of Mispair-Aligned N3T-Ethyl-N3T DNA Interstrand Crosslink
Descriptor: DNA (5'-D(*CP*GP*AP*AP*AP*(TTM)P*TP*TP*TP*CP*G)-3'), DNA (5'-D(*CP*GP*AP*AP*AP*TP*TP*TP*TP*CP*G)-3')
Authors:da Silva, M.W, Noronha, A.M, Noll, D.M, Miller, P.S, Colvin, O.M, Gamcsik, M.P.
Deposit date:2004-01-12
Release date:2005-01-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Accommodation of mispair aligned N3T-ethyl-N3T DNA interstrand cross link.
Biochemistry, 43, 2004
2LSC
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BU of 2lsc by Molmil
Solution structure of 2'F-ANA and ANA self-complementary duplex
Descriptor: DNA (5'-D(*(CFL)P*(GFL)P*(CFL)P*(GFL)P*(A5O)P*(A5O)P*(UAR)P*(UAR)P*(CFL)P*(GFL)P*(CFL)P*(GFL))-3')
Authors:Martin-Pintado, N, Yahyaee, M, Campos, R, Noronha, A, Wilds, C, Damha, M, Gonzalez, C.
Deposit date:2012-04-26
Release date:2012-07-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The solution structure of double helical arabino nucleic acids (ANA and 2'F-ANA): effect of arabinoses in duplex-hairpin interconversion.
Nucleic Acids Res., 40, 2012
2LZW
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DNA duplex containing mispair-aligned O6G-heptylene-O6G interstrand cross-link
Descriptor: DNA (5'-D(*CP*GP*AP*AP*AP*GP*TP*TP*TP*CP*G)-3'), HEPTANE
Authors:Denisov, A.Y, McManus, F.P, Noronha, A.M, Wilds, C.J.
Deposit date:2012-10-11
Release date:2013-10-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of interstrand cross-link repair by O 6 -alkylguanine DNA alkyltransferase.
Org.Biomol.Chem., 15, 2017
2LZV
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BU of 2lzv by Molmil
DNA duplex containing mispair-aligned O4U-heptylene-O4U interstrand cross-link
Descriptor: DNA (5'-D(*CP*GP*AP*AP*AP*UP*TP*TP*TP*CP*G)-3'), HEPTANE
Authors:Denisov, A.Y, McManus, F.P, Noronha, A.M, Wilds, C.J.
Deposit date:2012-10-11
Release date:2013-10-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of interstrand cross-link repair by O 6 -alkylguanine DNA alkyltransferase.
Org.Biomol.Chem., 15, 2017
2MH6
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Solution structure of DNA duplex containing N3T-ethylene-N1I interstrand cross-link
Descriptor: 5'-D(*CP*AP*GP*TP*TP*CP*CP*A)-3', 5'-D(*TP*GP*GP*AP*IP*CP*TP*G)-3'
Authors:Denisov, A.Y, O'Flaherty, D.K, Noronha, A.M, Wilds, C.J.
Deposit date:2013-11-18
Release date:2014-07-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure of an Ethylene Interstrand Cross-Linked DNA which Mimics the Lesion Formed by 1,3-Bis(2-chloroethyl)-1-nitrosourea.
Chemmedchem, 9, 2014

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