4XPO
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![BU of 4xpo by Molmil](/molmil-images/mine/4xpo) | Crystal structure of a novel alpha-galactosidase from Pedobacter saltans | Descriptor: | 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha-glucosidase | Authors: | Miyazaki, T, Ishizaki, Y, Ichikawa, M, Nishikawa, A, Tonozuka, T. | Deposit date: | 2015-01-17 | Release date: | 2015-05-20 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structural and biochemical characterization of novel bacterial alpha-galactosidases belonging to glycoside hydrolase family 31 Biochem.J., 469, 2015
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4XPR
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![BU of 4xpr by Molmil](/molmil-images/mine/4xpr) | Crystal structure of the mutant D365A of Pedobacter saltans GH31 alpha-galactosidase | Descriptor: | 1,2-ETHANEDIOL, Alpha-glucosidase | Authors: | Miyazaki, T, Ishizaki, Y, Ichikawa, M, Nishikawa, A, Tonozuka, T. | Deposit date: | 2015-01-17 | Release date: | 2015-05-20 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.01 Å) | Cite: | Structural and biochemical characterization of novel bacterial alpha-galactosidases belonging to glycoside hydrolase family 31 Biochem.J., 469, 2015
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4XPP
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![BU of 4xpp by Molmil](/molmil-images/mine/4xpp) | Crystal structure of Pedobacter saltans GH31 alpha-galactosidase complexed with D-galactose | Descriptor: | 1,2-ETHANEDIOL, Alpha-glucosidase, beta-D-galactopyranose | Authors: | Miyazaki, T, Ishizaki, Y, Ichikawa, M, Nishikawa, A, Tonozuka, T. | Deposit date: | 2015-01-17 | Release date: | 2015-05-20 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Structural and biochemical characterization of novel bacterial alpha-galactosidases belonging to glycoside hydrolase family 31 Biochem.J., 469, 2015
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4XPQ
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![BU of 4xpq by Molmil](/molmil-images/mine/4xpq) | Crystal structure of Pedobacter saltans GH31 alpha-galactosidase complexed with L-fucose | Descriptor: | 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha-glucosidase, ... | Authors: | Miyazaki, T, Ishizaki, Y, Ichikawa, M, Nishikawa, A, Tonozuka, T. | Deposit date: | 2015-01-17 | Release date: | 2015-05-20 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Structural and biochemical characterization of novel bacterial alpha-galactosidases belonging to glycoside hydrolase family 31 Biochem.J., 469, 2015
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4WVA
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![BU of 4wva by Molmil](/molmil-images/mine/4wva) | Crystal structure of GH63 mannosylglycerate hydrolase from Thermus thermophilus HB8 in complex with Tris | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ... | Authors: | Miyazaki, T, Ichikawa, M, Nishikawa, A, Tonozuka, T. | Deposit date: | 2014-11-05 | Release date: | 2015-03-11 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.67 Å) | Cite: | Crystal structure and substrate-binding mode of GH63 mannosylglycerate hydrolase from Thermus thermophilus HB8. J.Struct.Biol., 190, 2015
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4WVC
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![BU of 4wvc by Molmil](/molmil-images/mine/4wvc) | Crystal structure of GH63 mannosylglycerate hydrolase from Thermus thermophilus HB8 in complex with Tris and D-glycerate | Descriptor: | (2R)-2,3-DIHYDROXYPROPANOIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ... | Authors: | Miyazaki, T, Ichikawa, M, Nishikawa, A, Tonozuka, T. | Deposit date: | 2014-11-05 | Release date: | 2015-03-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystal structure and substrate-binding mode of GH63 mannosylglycerate hydrolase from Thermus thermophilus HB8. J.Struct.Biol., 190, 2015
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4WVB
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![BU of 4wvb by Molmil](/molmil-images/mine/4wvb) | Crystal structure of GH63 mannosylglycerate hydrolase from Thermus thermophilus HB8 in complex with glucose | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Uncharacterized protein, ... | Authors: | Miyazaki, T, Ichikawa, M, Nishikawa, A, Tonozuka, T. | Deposit date: | 2014-11-05 | Release date: | 2015-03-11 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.77 Å) | Cite: | Crystal structure and substrate-binding mode of GH63 mannosylglycerate hydrolase from Thermus thermophilus HB8. J.Struct.Biol., 190, 2015
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5GW7
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![BU of 5gw7 by Molmil](/molmil-images/mine/5gw7) | |
5CA3
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![BU of 5ca3 by Molmil](/molmil-images/mine/5ca3) | |
7BWB
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![BU of 7bwb by Molmil](/molmil-images/mine/7bwb) | Bombyx mori GH32 beta-fructofuranosidase BmSUC1 | Descriptor: | Beta-fructofuranosidase | Authors: | Miyazaki, T, Oba, N. | Deposit date: | 2020-04-14 | Release date: | 2020-11-04 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structural insight into the substrate specificity of Bombyx mori beta-fructofuranosidase belonging to the glycoside hydrolase family 32. Insect Biochem.Mol.Biol., 127, 2020
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7BWC
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![BU of 7bwc by Molmil](/molmil-images/mine/7bwc) | |
6LGD
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![BU of 6lgd by Molmil](/molmil-images/mine/6lgd) | Bombyx mori GH13 sucrose hydrolase complexed with 1,4-dideoxy-1,4-imino-D-arabinitol | Descriptor: | 1,4-DIDEOXY-1,4-IMINO-D-ARABINITOL, CALCIUM ION, GLYCEROL, ... | Authors: | Miyazaki, T. | Deposit date: | 2019-12-05 | Release date: | 2020-05-20 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases. J.Biol.Chem., 295, 2020
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6LGA
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![BU of 6lga by Molmil](/molmil-images/mine/6lga) | Bombyx mori GH13 sucrose hydrolase | Descriptor: | CALCIUM ION, GLYCEROL, MAGNESIUM ION, ... | Authors: | Miyazaki, T. | Deposit date: | 2019-12-05 | Release date: | 2020-05-20 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases. J.Biol.Chem., 295, 2020
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6LGH
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![BU of 6lgh by Molmil](/molmil-images/mine/6lgh) | Bombyx mori GH13 sucrose hydrolase mutant E322Q covalent intermediate | Descriptor: | CALCIUM ION, MAGNESIUM ION, Sucrose hydrolase, ... | Authors: | Miyazaki, T. | Deposit date: | 2019-12-05 | Release date: | 2020-05-20 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases. J.Biol.Chem., 295, 2020
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6LGG
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![BU of 6lgg by Molmil](/molmil-images/mine/6lgg) | Bombyx mori GH13 sucrose hydrolase mutant E322Q complexed with sucrose | Descriptor: | CALCIUM ION, MAGNESIUM ION, Sucrose hydrolase, ... | Authors: | Miyazaki, T. | Deposit date: | 2019-12-05 | Release date: | 2020-05-20 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.84 Å) | Cite: | Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases. J.Biol.Chem., 295, 2020
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6LGI
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![BU of 6lgi by Molmil](/molmil-images/mine/6lgi) | |
6LGC
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![BU of 6lgc by Molmil](/molmil-images/mine/6lgc) | Bombyx mori GH13 sucrose hydrolase complexed with 1-deoxynojirimycin | Descriptor: | 1-DEOXYNOJIRIMYCIN, CALCIUM ION, GLYCEROL, ... | Authors: | Miyazaki, T. | Deposit date: | 2019-12-05 | Release date: | 2020-05-20 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases. J.Biol.Chem., 295, 2020
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6LGE
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![BU of 6lge by Molmil](/molmil-images/mine/6lge) | Bombyx mori GH13 sucrose hydrolase complexed with acarbose | Descriptor: | 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, CALCIUM ION, MAGNESIUM ION, ... | Authors: | Miyazaki, T. | Deposit date: | 2019-12-05 | Release date: | 2020-05-20 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases. J.Biol.Chem., 295, 2020
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6LGB
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![BU of 6lgb by Molmil](/molmil-images/mine/6lgb) | Bombyx mori GH13 sucrose hydrolase complexed with glucose | Descriptor: | CALCIUM ION, GLYCEROL, MAGNESIUM ION, ... | Authors: | Miyazaki, T. | Deposit date: | 2019-12-05 | Release date: | 2020-05-20 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases. J.Biol.Chem., 295, 2020
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6LGF
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![BU of 6lgf by Molmil](/molmil-images/mine/6lgf) | Bombyx mori GH13 sucrose hydrolase mutant D247N complexed with sucrose | Descriptor: | CALCIUM ION, MAGNESIUM ION, Sucrose hydrolase, ... | Authors: | Miyazaki, T. | Deposit date: | 2019-12-05 | Release date: | 2020-05-20 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17exo-alpha-glucosidases. J.Biol.Chem., 295, 2020
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6M76
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![BU of 6m76 by Molmil](/molmil-images/mine/6m76) | GH31 alpha-N-acetylgalactosaminidase from Enterococcus faecalis | Descriptor: | 1,2-ETHANEDIOL, LPXTG-motif cell wall anchor domain protein | Authors: | Miyazaki, T. | Deposit date: | 2020-03-17 | Release date: | 2020-05-20 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Crystal structure of the Enterococcus faecalis alpha-N-acetylgalactosaminidase, a member of the glycoside hydrolase family 31. Febs Lett., 594, 2020
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6M77
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![BU of 6m77 by Molmil](/molmil-images/mine/6m77) | |
4XPS
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![BU of 4xps by Molmil](/molmil-images/mine/4xps) | Crystal structure of the mutant D365A of Pedobacter saltans GH31 alpha-galactosidase complexed with p-nitrophenyl-alpha-galactopyranoside | Descriptor: | 1,2-ETHANEDIOL, Alpha-glucosidase, P-NITROPHENOL, ... | Authors: | Miyazaki, T, Ishizaki, Y, Ichikawa, M, Nishikawa, A, Tonozuka, T. | Deposit date: | 2015-01-17 | Release date: | 2015-05-20 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structural and biochemical characterization of novel bacterial alpha-galactosidases belonging to glycoside hydrolase family 31 Biochem.J., 469, 2015
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5ZOH
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![BU of 5zoh by Molmil](/molmil-images/mine/5zoh) | |
7XTM
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![BU of 7xtm by Molmil](/molmil-images/mine/7xtm) | Crystal structure of the C-terminal domain of Bombyx mori N-acetylglucosaminyltransferase IV | Descriptor: | 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, N-acetylglucosaminyltransferase IV | Authors: | Miyazaki, T, Oka, N, Mori, S. | Deposit date: | 2022-05-17 | Release date: | 2022-09-28 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (1.47 Å) | Cite: | Crystal structure and sugar-binding ability of the C-terminal domain of N-acetylglucosaminyltransferase IV establish a new carbohydrate-binding module family. Glycobiology, 32, 2022
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