Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51 results

5WDG
DownloadVisualize
BU of 5wdg by Molmil
Acetolactate Synthase from Klebsiella pneumoniae in Complex with a Reaction Intermediate
Descriptor: (2S,3S)-2,3-dihydroxy-3-[(7S,8R,9aS)-8-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-2,7-dimethyl-5,7,8,10-tetrahydro-9aH-pyrimido[4,5-d][1,3]thiazolo[3,2-a]pyrimidin-9a-yl]-2-methylbutanoic acid, Acetolactate synthase, catabolic, ...
Authors:Latta, A.J, Andrews, F.H, McLeish, M.J.
Deposit date:2017-07-05
Release date:2018-07-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Acetolactate Synthase from Klebsiella pneumoniae in Complex with Mechanism-Based Inhibitor
To Be Published
3F6E
DownloadVisualize
BU of 3f6e by Molmil
Crystal structure of benzoylformate decarboxylase in complex with the pyridyl inhibitor 3-PKB
Descriptor: 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-2-[(1S,2E)-1-hydroxy-3-pyridin-3-ylprop-2-en-1-yl]-4-methyl-1,3-thiazol-3-ium, Benzoylformate decarboxylase, MAGNESIUM ION
Authors:Brandt, G.S, McLeish, M.J, Kenyon, G.L, Petsko, G.A, Ringe, D, Jordan, F.
Deposit date:2008-11-05
Release date:2008-12-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Detection and time course of formation of major thiamin diphosphate-bound covalent intermediates derived from a chromophoric substrate analogue on benzoylformate decarboxylase.
Biochemistry, 48, 2009
3F6B
DownloadVisualize
BU of 3f6b by Molmil
Crystal structure of benzoylformate decarboxylase in complex with the pyridyl inhibitor PAA
Descriptor: 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-2-[(1S,2E)-1-hydroxy-3-pyridin-3-ylprop-2-en-1-yl]-4-methyl-1,3-thiazol-3-ium, Benzoylformate decarboxylase, MAGNESIUM ION
Authors:Brandt, G.S, McLeish, M.J, Kenyon, G.L, Petsko, G.A, Ringe, D, Jordan, F.
Deposit date:2008-11-05
Release date:2008-12-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Detection and time course of formation of major thiamin diphosphate-bound covalent intermediates derived from a chromophoric substrate analogue on benzoylformate decarboxylase.
Biochemistry, 48, 2009
3FSJ
DownloadVisualize
BU of 3fsj by Molmil
Crystal structure of benzoylformate decarboxylase in complex with the inhibitor MBP
Descriptor: 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-{(S)-hydroxy[(R)-hydroxy(methoxy)phosphoryl]phenylmethyl}-5-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium, Benzoylformate decarboxylase, CALCIUM ION
Authors:Brandt, G.S, Kenyon, G.L, McLeish, M.J, Jordan, F, Petsko, G.A, Ringe, D.
Deposit date:2009-01-09
Release date:2009-01-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Snapshot of a reaction intermediate: analysis of benzoylformate decarboxylase in complex with a benzoylphosphonate inhibitor.
Biochemistry, 48, 2009
3IAE
DownloadVisualize
BU of 3iae by Molmil
Structure of benzaldehyde lyase A28S mutant with benzoylphosphonate
Descriptor: 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-{(S)-hydroxy[(R)-hydroxy(methoxy)phosphoryl]phenylmethyl}-5-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium, Benzaldehyde lyase, CALCIUM ION
Authors:Brandt, G.S, Petsko, G.A, Ringe, D, McLeish, M.J.
Deposit date:2009-07-13
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Active-site engineering of benzaldehyde lyase shows that a point mutation can confer both new reactivity and susceptibility to mechanism-based inhibition.
J.Am.Chem.Soc., 132, 2010
3IAF
DownloadVisualize
BU of 3iaf by Molmil
Structure of benzaldehyde lyase A28S mutant with monomethyl benzoylphosphonate
Descriptor: Benzaldehyde lyase, MAGNESIUM ION, THIAMINE DIPHOSPHATE
Authors:Brandt, G.S, Petsko, G.A, Ringe, D, McLeish, M.J.
Deposit date:2009-07-13
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Active-site engineering of benzaldehyde lyase shows that a point mutation can confer both new reactivity and susceptibility to mechanism-based inhibition.
J.Am.Chem.Soc., 132, 2010
4D5G
DownloadVisualize
BU of 4d5g by Molmil
Structure of recombinant CDH-H28AN484A
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, CYCLOHEXANE-1,2-DIONE HYDROLASE, DI(HYDROXYETHYL)ETHER, ...
Authors:Loschonsky, S, Wacker, T, Waltzer, S, Giovannini, P.P, McLeish, M.J, Andrade, S.L.A, Mueller, M.
Deposit date:2014-11-04
Release date:2015-01-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Extended Reaction Scope of Thiamine Diphosphate Dependent Cyclohexane-1,2-Dione Hydrolase: From C-C Bond Cleavage to C-C Bond Ligation.
Angew.Chem.Int.Ed.Engl., 53, 2014
4GM0
DownloadVisualize
BU of 4gm0 by Molmil
Crystal Structure of Benzoylformate Decarboxylase Mutant L403N
Descriptor: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
Authors:Novak, W.R.P, Andrews, F.H, Tom, A.R, Gunderman, P.R, McLeish, M.J.
Deposit date:2012-08-15
Release date:2013-05-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:A bulky hydrophobic residue is not required to maintain the v-conformation of enzyme-bound thiamin diphosphate.
Biochemistry, 52, 2013
4GM1
DownloadVisualize
BU of 4gm1 by Molmil
Crystal Structure of Benzoylformate Decarboxylase Mutant L403S
Descriptor: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
Authors:Novak, W.R.P, Andrews, F.H, Tom, A.R, Gunderman, P.R, McLeish, M.J.
Deposit date:2012-08-15
Release date:2013-05-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:A bulky hydrophobic residue is not required to maintain the v-conformation of enzyme-bound thiamin diphosphate.
Biochemistry, 52, 2013
4GG1
DownloadVisualize
BU of 4gg1 by Molmil
Crystal Structure of Benzoylformate Decarboxylase Mutant L403T
Descriptor: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
Authors:Novak, W.R.P, Andrews, F.H, Tom, A.R, Gunderman, P.R, McLeish, M.J.
Deposit date:2012-08-04
Release date:2013-05-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.069 Å)
Cite:A bulky hydrophobic residue is not required to maintain the v-conformation of enzyme-bound thiamin diphosphate.
Biochemistry, 52, 2013
4GM4
DownloadVisualize
BU of 4gm4 by Molmil
Crystal Structure of Benzoylformate Decarboxylase Mutant L403I
Descriptor: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
Authors:Novak, W.R.P, Andrews, F.H, Tom, A.R, Gunderman, P.R, McLeish, M.J.
Deposit date:2012-08-15
Release date:2013-05-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:A bulky hydrophobic residue is not required to maintain the v-conformation of enzyme-bound thiamin diphosphate.
Biochemistry, 52, 2013
4GPE
DownloadVisualize
BU of 4gpe by Molmil
Crystal Structure of Benzoylformate Decarboxylase Mutant L403M
Descriptor: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
Authors:Novak, W.R.P, Andrews, F.H, Tom, A.R, Gunderman, P.R, McLeish, M.J.
Deposit date:2012-08-20
Release date:2013-05-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:A bulky hydrophobic residue is not required to maintain the v-conformation of enzyme-bound thiamin diphosphate.
Biochemistry, 52, 2013
4GP9
DownloadVisualize
BU of 4gp9 by Molmil
Crystal Structure of Benzoylformate Decarboxylase Mutant L403F
Descriptor: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
Authors:Novak, W.R.P, Andrews, F.H, Tom, A.R, Gunderman, P.R, McLeish, M.J.
Deposit date:2012-08-20
Release date:2013-05-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:A bulky hydrophobic residue is not required to maintain the v-conformation of enzyme-bound thiamin diphosphate.
Biochemistry, 52, 2013
4JD5
DownloadVisualize
BU of 4jd5 by Molmil
Crystal Structure of Benzoylformate Decarboxylase Mutant L403E
Descriptor: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
Authors:Novak, W.R.P, Andrews, F.H, Tom, A.R, Gunderman, P.R, McLeish, M.J.
Deposit date:2013-02-23
Release date:2013-05-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:A bulky hydrophobic residue is not required to maintain the v-conformation of enzyme-bound thiamin diphosphate.
Biochemistry, 52, 2013
4K9M
DownloadVisualize
BU of 4k9m by Molmil
Crystal Structure of the His281Asn mutant of Benzoylformate Decarboxylase from Pseudomonas putida
Descriptor: Benzoylformate decarboxylase, CALCIUM ION, MAGNESIUM ION, ...
Authors:Brodkin, H.R, McLeish, M.J.
Deposit date:2013-04-20
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal Structure of the His281Asn mutant of Benzoylformate Decarboxylase from Pseudomonas putida
To be Published
4K9N
DownloadVisualize
BU of 4k9n by Molmil
Crystal Structure of the Ala460Ile mutant of Benzoylformate Decarboxylase from Pseudomonas putida
Descriptor: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, GLYCEROL, ...
Authors:Brodkin, H.R, McLeish, M.J.
Deposit date:2013-04-20
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the Ala460Ile mutant of Benzoylformate Decarboxylase from Pseudomonas putida
To be Published
4K9Q
DownloadVisualize
BU of 4k9q by Molmil
The Crystal Structure of Benzoylformate Decarboxylase from Polynucleobacter necessarius
Descriptor: Benzoylformate Decarboxylase, MAGNESIUM ION, THIAMINE DIPHOSPHATE
Authors:Brodkin, H.R, Novak, W.R.P, McLeish, M.J.
Deposit date:2013-04-20
Release date:2014-04-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.598 Å)
Cite:The Crystal Structure of Benzoylformate Decarboxylase from Polynucleobacter necessarius
To be Published
4K9P
DownloadVisualize
BU of 4k9p by Molmil
Crystal Structure of the His281Tyr/Ala460Ile Double Mutant of Benzoylformate Decarboxylase from Pseudomonas putida
Descriptor: Benzoylformate decarboxylase, CALCIUM ION, GLYCEROL, ...
Authors:Brodkin, H.R, McLeish, M.J.
Deposit date:2013-04-20
Release date:2013-05-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.244 Å)
Cite:Crystal Structure of the His281Tyr/Ala460Ile Double Mutant of Benzoylformate Decarboxylase from Pseudomonas putida
To be Published
4K9O
DownloadVisualize
BU of 4k9o by Molmil
Crystal Structure of the Phe397Ala mutant of Benzoylformate Decarboxylase from Pseudomonas putida
Descriptor: Benzoylformate decarboxylase, CALCIUM ION, GLYCEROL, ...
Authors:Brodkin, H.R, McLeish, M.J.
Deposit date:2013-04-20
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.888 Å)
Cite:Crystal Structure of the Phe397Ala mutant of Benzoylformate Decarboxylase from Pseudomonas putida
To be Published
4K9L
DownloadVisualize
BU of 4k9l by Molmil
Crystal Structure of the His281Thr mutant of Benzoylformate Decarboxylase from Pseudomonas putida
Descriptor: 1,2-ETHANEDIOL, 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, ...
Authors:Brodkin, H.R, McLeish, M.J.
Deposit date:2013-04-20
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.649 Å)
Cite:Crystal Structure of the His281Thr mutant of Benzoylformate Decarboxylase from Pseudomonas putida
To be Published
4K9K
DownloadVisualize
BU of 4k9k by Molmil
Crystal Structure of the His281Tyr mutant of Benzoylformate Decarboxylase from Pseudomonas putida
Descriptor: Benzoylformate decarboxylase, CALCIUM ION, MAGNESIUM ION, ...
Authors:Brodkin, H.R, McLeish, M.J.
Deposit date:2013-04-20
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.301 Å)
Cite:Crystal Structure of the His281Tyr mutant of Benzoylformate Decarboxylase from Pseudomonas putida
To be Published
4MPJ
DownloadVisualize
BU of 4mpj by Molmil
Phosphorylation of an active site threonine in the benzyolformate decarboxylase mutant S26T by phosphonate inactivation
Descriptor: Benzoylformate decarboxylase, CALCIUM ION, CHLORIDE ION, ...
Authors:Andrews, F.H, McLeish, M.J.
Deposit date:2013-09-12
Release date:2015-03-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Phosphorylation of an active site threonine in the benzyolformate decarboxylase mutant S26T by phosphonate inactivation
To be Published
4MPR
DownloadVisualize
BU of 4mpr by Molmil
Benzoylformate Decarboxylase: Is the tetramer vital for activity?
Descriptor: Benzoylformate decarboxylase, CALCIUM ION, CHLORIDE ION, ...
Authors:Andrews, F.H, McLeish, M.J.
Deposit date:2013-09-13
Release date:2014-08-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Perturbation of the monomer-monomer interfaces of the benzoylformate decarboxylase tetramer.
Biochemistry, 53, 2014
4MPP
DownloadVisualize
BU of 4mpp by Molmil
Crystal Structure of Benzoylformate Decarboxylase Mutant H281Y/T377P/F397T/A460I
Descriptor: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
Authors:Andrews, F.H, McLeish, M.J.
Deposit date:2013-09-13
Release date:2015-03-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:A pseudo study of thiamin diphosphate-dependent decarboxylases
To be Published
4MQ5
DownloadVisualize
BU of 4mq5 by Molmil
Crystal Structure of Benzoylformate Decarboxylase Mutant A306F
Descriptor: Benzoylformate decarboxylase, CALCIUM ION, SODIUM ION, ...
Authors:Andrews, F.H, McLeish, M.J.
Deposit date:2013-09-15
Release date:2014-08-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Perturbation of the monomer-monomer interfaces of the benzoylformate decarboxylase tetramer.
Biochemistry, 53, 2014

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon