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PDB: 170 results

1QB4
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CRYSTAL STRUCTURE OF MN(2+)-BOUND PHOSPHOENOLPYRUVATE CARBOXYLASE
Descriptor: ASPARTIC ACID, MANGANESE (II) ION, PHOSPHOENOLPYRUVATE CARBOXYLASE
Authors:Matsumura, H, Terada, M, Shirakata, S, Inoue, T, Yoshinaga, T, Izui, K, Kai, Y.
Deposit date:1999-04-30
Release date:2002-05-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Plausible phosphoenolpyruvate binding site revealed by 2.6 A structure of Mn2+-bound phosphoenolpyruvate carboxylase from Escherichia coli
FEBS Lett., 458, 1999
6KYI
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Rice Rubisco in complex with sulfate ions
Descriptor: GLYCEROL, Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain, ...
Authors:Matsumura, H, Yoshizawa, T, Tanaka, S, Yoshikawa, H.
Deposit date:2019-09-19
Release date:2020-09-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Hybrid Rubisco with Complete Replacement of Rice Rubisco Small Subunits by Sorghum Counterparts Confers C 4 Plant-like High Catalytic Activity.
Mol Plant, 13, 2020
1JQO
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Crystal structure of C4-form phosphoenolpyruvate carboxylase from maize
Descriptor: SULFATE ION, phosphoenolpyruvate carboxylase
Authors:Matsumura, H, Kai, Y.
Deposit date:2001-08-07
Release date:2003-01-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of C4 form maize and quaternary complex of E. coli phosphoenolpyruvate carboxylases.
Structure, 10, 2002
1JQN
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Crystal structure of E.coli phosphoenolpyruvate carboxylase in complex with Mn2+ and DCDP
Descriptor: 3,3-DICHLORO-2-PHOSPHONOMETHYL-ACRYLIC ACID, ASPARTIC ACID, MANGANESE (II) ION, ...
Authors:Matsumura, H, Kai, Y.
Deposit date:2001-08-07
Release date:2003-01-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structures of C4 form maize and quaternary complex of E. coli phosphoenolpyruvate carboxylases.
Structure, 10, 2002
1MHO
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THE 2.0 A STRUCTURE OF HOLO S100B FROM BOVINE BRAIN
Descriptor: CALCIUM ION, S-100 PROTEIN
Authors:Matsumura, H, Shiba, T, Inoue, T, Harada, S, Yasushi, K.A.I.
Deposit date:1997-09-11
Release date:1998-11-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:A novel mode of target recognition suggested by the 2.0 A structure of holo S100B from bovine brain.
Structure, 6, 1998
8GZV
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Klebsiella pneumoniae FtsZ complexed with monobody (P212121)
Descriptor: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, Monobody
Authors:Matsumura, H, Yoshizawa, T, Fujita, J, Tanaka, S, Amesaka, H.
Deposit date:2022-09-27
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody.
Nat Commun, 14, 2023
8GZX
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Escherichia coli FtsZ complexed with monobody (P212121)
Descriptor: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, Monobody
Authors:Matsumura, H, Yoshizawa, T, Fujita, J, Tanaka, S, Amesaka, H.
Deposit date:2022-09-27
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody.
Nat Commun, 14, 2023
8GZW
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Klebsiella pneumoniae FtsZ complexed with monobody (P21)
Descriptor: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, Monobody
Authors:Matsumura, H, Yoshizawa, T, Fujita, J, Tanaka, S, Amesaka, H.
Deposit date:2022-09-27
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody.
Nat Commun, 14, 2023
8GZY
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BU of 8gzy by Molmil
Escherichia coli FtsZ complexed with monobody (P21)
Descriptor: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, Monobody
Authors:Matsumura, H, Yoshizawa, T, Fujita, J, Tanaka, S, Amesaka, H.
Deposit date:2022-09-27
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody.
Nat Commun, 14, 2023
6KYJ
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BU of 6kyj by Molmil
Hybrid-Rubisco (rice RbcL and sorghum RbcS) in complex with sulfate ions
Descriptor: GLYCEROL, Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain, ...
Authors:Matsumura, H, Yoshizawa, T, Tanaka, S, Yoshikawa, H.
Deposit date:2019-09-19
Release date:2020-09-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Hybrid Rubisco with Complete Replacement of Rice Rubisco Small Subunits by Sorghum Counterparts Confers C 4 Plant-like High Catalytic Activity.
Mol Plant, 13, 2020
5B3F
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BU of 5b3f by Molmil
Crystal structure of phosphoribulokinase from Methanospirillum hungatei
Descriptor: Phosphoribulokinase/uridine kinase, SULFATE ION
Authors:Matsumura, H, Ashida, H.
Deposit date:2016-02-22
Release date:2017-01-18
Last modified:2020-02-26
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A RuBisCO-mediated carbon metabolic pathway in methanogenic archaea
Nat Commun, 8, 2017
2CW8
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BU of 2cw8 by Molmil
Crystal structure of intein homing endonuclease II
Descriptor: Endonuclease PI-PkoII, GLYCEROL, SULFATE ION
Authors:Matsumura, H, Takahashi, H, Inoue, T, Hashimoto, H, Nishioka, M, Fujiwara, S, Takagi, M, Imanaka, T, Kai, Y.
Deposit date:2005-06-17
Release date:2006-04-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of intein homing endonuclease II encoded in DNA polymerase gene from hyperthermophilic archaeon Thermococcus kodakaraensis strain KOD1
Proteins, 63, 2006
2CW7
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Crystal structure of intein homing endonuclease II
Descriptor: Endonuclease PI-PkoII, SULFATE ION
Authors:Matsumura, H, Takahashi, H, Inoue, T, Hashimoto, H, Nishioka, M, Fujiwara, S, Takagi, M, Imanaka, T, Kai, Y.
Deposit date:2005-06-17
Release date:2006-04-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of intein homing endonuclease II encoded in DNA polymerase gene from hyperthermophilic archaeon Thermococcus kodakaraensis strain KOD1
Proteins, 63, 2006
2DSN
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Crystal structure of T1 lipase
Descriptor: CALCIUM ION, CHLORIDE ION, SODIUM ION, ...
Authors:Matsumura, H, Kai, Y.
Deposit date:2006-07-03
Release date:2007-07-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Novel cation-pi interaction revealed by crystal structure of thermoalkalophilic lipase
Proteins, 70, 2007
3VP9
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Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p mutant
Descriptor: 1,4-DIETHYLENE DIOXIDE, General transcriptional corepressor TUP1
Authors:Matsumura, H, Kusaka, N, Nakamura, T, Tanaka, N, Sagegami, K, Uegaki, K, Inoue, T, Mukai, Y.
Deposit date:2012-02-28
Release date:2012-06-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p and its functional implications
J.Biol.Chem., 287, 2012
3WRV
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Crystal structure of NN domain of resistance protein
Descriptor: Tm-1 protein
Authors:Matsumura, H, Katoh, E.
Deposit date:2014-02-27
Release date:2014-08-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural basis for the recognition-evasion arms race between Tomato mosaic virus and the resistance gene Tm-1
Proc.Natl.Acad.Sci.USA, 111, 2014
3VP8
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BU of 3vp8 by Molmil
Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p
Descriptor: General transcriptional corepressor TUP1
Authors:Matsumura, H, Kusaka, N, Nakamura, T, Tanaka, N, Sagegami, K, Uegaki, K, Inoue, T, Mukai, Y.
Deposit date:2012-02-28
Release date:2012-06-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p and its functional implications
J.Biol.Chem., 287, 2012
3AXM
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BU of 3axm by Molmil
Structure of rice Rubisco in complex with 6PG
Descriptor: 6-PHOSPHOGLUCONIC ACID, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, ...
Authors:Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y.
Deposit date:2011-04-11
Release date:2012-04-11
Last modified:2013-06-05
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate
J.Mol.Biol., 422, 2012
3WRY
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BU of 3wry by Molmil
Crystal structure of helicase complex 2
Descriptor: CHLORIDE ION, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Matsumura, H, Katoh, E.
Deposit date:2014-02-27
Release date:2014-08-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the recognition-evasion arms race between Tomato mosaic virus and the resistance gene Tm-1
Proc.Natl.Acad.Sci.USA, 111, 2014
3AXK
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BU of 3axk by Molmil
Structure of rice Rubisco in complex with NADP(H)
Descriptor: GLYCEROL, MAGNESIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y.
Deposit date:2011-04-11
Release date:2012-04-11
Last modified:2013-06-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate
J.Mol.Biol., 422, 2012
3WRX
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Crystal structure of helicase complex 1
Descriptor: CESIUM ION, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Matsumura, H, Katoh, E.
Deposit date:2014-02-27
Release date:2014-08-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for the recognition-evasion arms race between Tomato mosaic virus and the resistance gene Tm-1
Proc.Natl.Acad.Sci.USA, 111, 2014
3B1K
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Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with CP12 in the absence of copper from Synechococcus elongatus
Descriptor: CP12, Glyceraldehyde 3-phosphate dehydrogenase (NADP+), NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Matsumura, H, Kai, A, Inoue, T.
Deposit date:2011-07-04
Release date:2012-01-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.302 Å)
Cite:Structure Basis for the Regulation of Glyceraldehyde-3-Phosphate Dehydrogenase Activity via the Intrinsically Disordered Protein CP12.
Structure, 19, 2011
3B1J
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Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with CP12 in the presence of copper from Synechococcus elongatus
Descriptor: COPPER (II) ION, CP12, Glyceraldehyde 3-phosphate dehydrogenase (NADP+), ...
Authors:Matsumura, H, Kai, A, Inoue, T.
Deposit date:2011-07-04
Release date:2012-01-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure Basis for the Regulation of Glyceraldehyde-3-Phosphate Dehydrogenase Activity via the Intrinsically Disordered Protein CP12.
Structure, 19, 2011
3B20
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Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with NADfrom Synechococcus elongatus"
Descriptor: Glyceraldehyde 3-phosphate dehydrogenase (NADP+), NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION
Authors:Matsumura, H, Kai, A, Maeda, T, Inoue, T.
Deposit date:2011-07-17
Release date:2012-01-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.398 Å)
Cite:Structure Basis for the Regulation of Glyceraldehyde-3-Phosphate Dehydrogenase Activity via the Intrinsically Disordered Protein CP12.
Structure, 19, 2011
2Z5G
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BU of 2z5g by Molmil
Crystal structure of T1 lipase F16L mutant
Descriptor: CALCIUM ION, CHLORIDE ION, Thermostable lipase, ...
Authors:Matsumura, H, Yamamoto, T, Inoue, T, Kai, Y.
Deposit date:2007-07-08
Release date:2007-10-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Novel cation-pi interaction revealed by crystal structure of thermoalkalophilic lipase
Proteins, 70, 2007

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