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PDB: 119 results

1HUX
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CRYSTAL STRUCTURE OF THE ACIDAMINOCOCCUS FERMENTANS (R)-2-HYDROXYGLUTARYL-COA DEHYDRATASE COMPONENT A
Descriptor: ACTIVATOR OF (R)-2-HYDROXYGLUTARYL-COA DEHYDRATASE, ADENOSINE-5'-DIPHOSPHATE, IRON/SULFUR CLUSTER
Authors:Locher, K.P, Hans, M, Yeh, A.P, Schmid, B, Buckel, W, Rees, D.C.
Deposit date:2001-01-04
Release date:2001-03-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the Acidaminococcus fermentans 2-hydroxyglutaryl-CoA dehydratase component A.
J.Mol.Biol., 307, 2001
1BY5
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FHUA FROM E. COLI, WITH ITS LIGAND FERRICHROME
Descriptor: FE (III) ION, FERRIC HYDROXAMATE UPTAKE PROTEIN, FERRICHROME, ...
Authors:Locher, K.P, Rees, B, Koebnik, R, Mitschler, A, Moulinier, L, Rosenbusch, J.P, Moras, D.
Deposit date:1998-10-23
Release date:1999-01-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Transmembrane signaling across the ligand-gated FhuA receptor: crystal structures of free and ferrichrome-bound states reveal allosteric changes.
Cell(Cambridge,Mass.), 95, 1998
1BY3
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FHUA FROM E. COLI
Descriptor: N-OCTYL-2-HYDROXYETHYL SULFOXIDE, PROTEIN (FERRICHROME-IRON RECEPTOR PRECURSOR (FHUA))
Authors:Locher, K.P, Rees, B, Koebnik, R, Mitschler, A, Moulinier, L, Rosenbusch, J.P, Moras, D.
Deposit date:1998-10-22
Release date:1999-01-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Transmembrane signaling across the ligand-gated FhuA receptor: crystal structures of free and ferrichrome-bound states reveal allosteric changes.
Cell(Cambridge,Mass.), 95, 1998
1L7V
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Bacterial ABC Transporter Involved in B12 Uptake
Descriptor: CYCLO-TETRAMETAVANADATE, VITAMIN B12 TRANSPORT SYSTEM PERMEASE PROTEIN BTUC, Vitamin B12 transport ATP-binding protein btuD
Authors:Locher, K.P, Lee, A.T, Rees, D.C.
Deposit date:2002-03-18
Release date:2002-05-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The E. coli BtuCD structure: a framework for ABC transporter architecture and mechanism.
Science, 296, 2002
3CFZ
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Crystal structure of M. jannaschii periplasmic binding protein ModA/WtpA with bound tungstate
Descriptor: TUNGSTATE(VI)ION, UPF0100 protein MJ1186
Authors:Comellas-Bigler, M, Hollenstein, K, Locher, K.P.
Deposit date:2008-03-04
Release date:2009-03-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Distorted octahedral coordination of tungstate in a subfamily of specific binding proteins.
J.Biol.Inorg.Chem., 14, 2009
2QI9
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ABC-transporter BtuCD in complex with its periplasmic binding protein BtuF
Descriptor: DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, PHOSPHATE ION, ...
Authors:Hvorup, R.N, Goetz, B.A, Niederer, M, Hollenstein, K, Perozo, E, Locher, K.P.
Deposit date:2007-07-03
Release date:2007-08-14
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Asymmetry in the structure of the ABC transporter-binding protein complex BtuCD-BtuF.
Science, 317, 2007
7O9W
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BU of 7o9w by Molmil
Encequidar-bound human P-glycoprotein in complex with UIC2-Fab
Descriptor: Multidrug resistance protein 1, UIC2 Fab-fragment heavy chain, UIC2 Fab-fragment light chain, ...
Authors:Nosol, K, Locher, K.P.
Deposit date:2021-04-17
Release date:2022-01-12
Last modified:2022-01-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Discovery and Characterization of Potent Dual P-Glycoprotein and CYP3A4 Inhibitors: Design, Synthesis, Cryo-EM Analysis, and Biological Evaluations.
J.Med.Chem., 65, 2022
1N2Z
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2.0 Angstrom structure of BtuF, the vitamin B12 binding protein of E. coli
Descriptor: CADMIUM ION, CHLORIDE ION, CYANOCOBALAMIN, ...
Authors:Borths, E.L, Locher, K.P, Lee, A.T, Rees, D.C.
Deposit date:2002-10-24
Release date:2002-12-18
Last modified:2021-08-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of Escherichia coli BtuF and binding to its cognate ATP binding cassette transporter
Proc.Natl.Acad.Sci.USA, 99, 2002
5OVW
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BU of 5ovw by Molmil
Nanobody-bound BtuF, the vitamin B12 binding protein in Escherichia coli
Descriptor: GLYCEROL, Nanobody, Vitamin B12-binding protein
Authors:Mireku, S.A, Sauer, M.M, Glockshuber, R, Locher, K.P.
Deposit date:2017-08-30
Release date:2017-11-08
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.653 Å)
Cite:Structural basis of nanobody-mediated blocking of BtuF, the cognate substrate-binding protein of the Escherichia coli vitamin B12 transporter BtuCD.
Sci Rep, 7, 2017
7OCI
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BU of 7oci by Molmil
Cryo-EM structure of yeast Ost6p containing oligosaccharyltransferase complex
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wild, R, Neuhaus, J.D, Eyring, J, Irobalieva, R.N, Kowal, J, Lin, C.W, Locher, K.P, Aebi, M.
Deposit date:2021-04-27
Release date:2022-02-16
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Functional analysis of Ost3p and Ost6p containing yeast oligosaccharyltransferases.
Glycobiology, 31, 2021
6EJJ
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Structure of a glycosyltransferase / state 2
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-glucopyranose, CHLORIDE ION, NerylNeryl pyrophosphate, ...
Authors:Ramirez, A.S, Boilevin, J, Mehdipour, A.R, Hummer, G, Darbre, T, Reymond, J.L, Locher, K.P.
Deposit date:2017-09-21
Release date:2018-02-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of the molecular ruler mechanism of a bacterial glycosyltransferase.
Nat Commun, 9, 2018
4FI3
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Structure of vitamin B12 transporter BtuCD-F in a nucleotide-bound state
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Vitamin B12 import ATP-binding protein BtuD, ...
Authors:Korkhov, V.M, Mireku, S.A, Locher, K.P.
Deposit date:2012-06-07
Release date:2012-09-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.466 Å)
Cite:Structure of AMP-PNP-bound vitamin B12 transporter BtuCD-F.
Nature, 490, 2012
8RQF
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BU of 8rqf by Molmil
Cryo-EM structure of human NTCP-Bulevirtide complex
Descriptor: Fab-specific nanobody, Heavy chain of Fab3, Light chain of Fab3, ...
Authors:Liu, H, Zakrzewicz, D, Nosol, K, Irobalieva, R.N, Mukherjee, S, Bang-Soerensen, R, Goldmann, N, Kunz, S, Rossi, L, Kossiakoff, A.A, Urban, S, Glebe, D, Geyer, J, Locher, K.P.
Deposit date:2024-01-18
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:Cryo-EM structure of human NTCP-Bulevirtide complex
To Be Published
7PHQ
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BU of 7phq by Molmil
Structure of homo-dimeric Staphylococcus capitis divalent metal ion transporter (DMT) by NabFab-fiducial assisted cryo-EM
Descriptor: Anti-Fab nanobody, DMT-Nb16_4, Divalent metal cation transporter MntH, ...
Authors:Bloch, J.S, Mukherjee, S, Kowal, J, Kossiakoff, A.A, Locher, K.P.
Deposit date:2021-08-18
Release date:2021-09-01
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (8.45 Å)
Cite:Development of a universal nanobody-binding Fab module for fiducial-assisted cryo-EM studies of membrane proteins.
Proc.Natl.Acad.Sci.USA, 118, 2021
8PN9
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Structure of human oligosaccharyltransferase OST-A complex bound to NGI-1
Descriptor: (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAENYL TRIHYDROGEN DIPHOSPHATE, (2~{S},3~{R},4~{R},5~{S},6~{S})-2-(hydroxymethyl)-6-[(1~{S},2~{R},3~{R},4~{R},5'~{S},6~{S},7~{R},8~{S},9~{R},12~{R},13~{R},15~{S},16~{S},18~{R})-5',7,9,13-tetramethyl-3,15-bis(oxidanyl)spiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icosane-6,2'-oxane]-16-yl]oxy-oxane-3,4,5-triol, (4R,7R)-4-hydroxy-N,N,N-trimethyl-4,9-dioxo-7-[(undecanoyloxy)methyl]-3,5,8-trioxa-4lambda~5~-phosphadocosan-1-aminium, ...
Authors:Ramirez, A.S, Kowal, J, Locher, K.P.
Deposit date:2023-06-30
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.61 Å)
Cite:Positive selection CRISPR screens reveal a druggable pocket in an oligosaccharyltransferase required for inflammatory signaling to NF-kappa B.
Cell, 187, 2024
7PIJ
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BU of 7pij by Molmil
Structure of Staphylococcus capitis divalent metal ion transporter (DMT) by NabFab-fiducial assisted cryo-EM
Descriptor: Anti-Fab nanobody, DMTNb16_4, Divalent metal cation transporter MntH, ...
Authors:Bloch, J.S, Mukherjee, S, Kowal, J, Kossiakoff, A.A, Locher, K.P.
Deposit date:2021-08-20
Release date:2021-09-01
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (3.78 Å)
Cite:Development of a universal nanobody-binding Fab module for fiducial-assisted cryo-EM studies of membrane proteins.
Proc.Natl.Acad.Sci.USA, 118, 2021
7PHP
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BU of 7php by Molmil
Structure of Multidrug and Toxin Compound Extrusion (MATE) transporter NorM by NabFab-fiducial assisted cryo-EM
Descriptor: Anti-Fab nanobody, Multidrug resistance protein NorM, NabFab HC, ...
Authors:Bloch, J.S, Mukherjee, S, Kowal, J, Niederer, M, Pardon, E, Steyaert, J, Kossiakoff, A.A, Locher, K.P.
Deposit date:2021-08-18
Release date:2021-09-01
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Development of a universal nanobody-binding Fab module for fiducial-assisted cryo-EM studies of membrane proteins.
Proc.Natl.Acad.Sci.USA, 118, 2021
4R9U
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Structure of vitamin B12 transporter BtuCD in a nucleotide-bound outward facing state
Descriptor: LAURYL DIMETHYLAMINE-N-OXIDE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Korkhov, V.M, Mireku, S.A, Veprintsev, D.B, Locher, K.P.
Deposit date:2014-09-08
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.785 Å)
Cite:Structure of AMP-PNP-bound BtuCD and mechanism of ATP-powered vitamin B12 transport by BtuCD-F.
Nat.Struct.Mol.Biol., 21, 2014
4ZRQ
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BU of 4zrq by Molmil
E88 deletion mutant of CD320 in complex with TC2
Descriptor: CALCIUM ION, CD320 antigen, CYANOCOBALAMIN, ...
Authors:Alam, A, Locher, K.P.
Deposit date:2015-05-12
Release date:2016-07-20
Last modified:2021-08-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of transcobalamin recognition by human CD320 receptor.
Nat Commun, 7, 2016
4ZRP
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TC:CD320
Descriptor: CALCIUM ION, CD320 antigen, CYANOCOBALAMIN, ...
Authors:Alam, A, Locher, K.P.
Deposit date:2015-05-12
Release date:2016-07-20
Last modified:2021-08-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of transcobalamin recognition by human CD320 receptor.
Nat Commun, 7, 2016
2HYD
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BU of 2hyd by Molmil
Multidrug ABC transporter SAV1866
Descriptor: ABC transporter homolog, ADENOSINE-5'-DIPHOSPHATE, SODIUM ION
Authors:Dawson, R.J.P, Locher, K.P.
Deposit date:2006-08-05
Release date:2006-09-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of a bacterial multidrug ABC transporter.
Nature, 443, 2006
6QEX
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Nanodisc reconstituted human ABCB1 in complex with UIC2 fab and taxol
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
Authors:Alam, A, Locher, K.P.
Deposit date:2019-01-08
Release date:2019-02-27
Last modified:2021-06-02
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural insight into substrate and inhibitor discrimination by human P-glycoprotein.
Science, 363, 2019
7OZ1
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BU of 7oz1 by Molmil
Cryo-EM structure of ABCG1 E242Q mutant with ATP and cholesteryl hemisuccinate bound
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, ADENOSINE-5'-TRIPHOSPHATE, CHOLESTEROL HEMISUCCINATE, ...
Authors:Skarda, L, Kowal, J, Locher, K.P.
Deposit date:2021-06-25
Release date:2021-09-22
Last modified:2021-09-29
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of the Human Cholesterol Transporter ABCG1.
J.Mol.Biol., 433, 2021
7QBG
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TC:CD320 in complex with nanobody TC-Nb4
Descriptor: Anti-TC:CD320 nanobody TC-Nb4, CALCIUM ION, CD320 antigen, ...
Authors:Bloch, J.S, Locher, K.P.
Deposit date:2021-11-19
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Generation of nanobodies targeting the human, transcobalamin-mediated vitamin B 12 uptake route.
Faseb J., 36, 2022
7QBE
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TC:CD320 in complex with nanobody TC-Nb11
Descriptor: Anti-transcobalamin-2 nanobody TC-Nb11, CALCIUM ION, CD320 antigen, ...
Authors:Bloch, J.S, Locher, K.P.
Deposit date:2021-11-19
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:Generation of nanobodies targeting the human, transcobalamin-mediated vitamin B 12 uptake route.
Faseb J., 36, 2022

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