Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 218 results

3OUC
DownloadVisualize
BU of 3ouc by Molmil
MDR769 HIV-1 protease complexed with p2/NC hepta-peptide
Descriptor: MDR HIV-1 protease, p2/NC substrate peptide
Authors:Liu, Z, Wang, Y, Brunzelle, J, Kovari, I.A, Kovari, L.C.
Deposit date:2010-09-14
Release date:2011-03-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease.
Protein J., 30, 2011
4ISB
DownloadVisualize
BU of 4isb by Molmil
Crystal Structure of Apo Mtb FadD10
Descriptor: Long chain fatty acid CoA ligase FadD10, SULFATE ION
Authors:Liu, Z, Wang, F, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2013-01-16
Release date:2013-05-08
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of Mycobacterium tuberculosis FadD10 protein reveal a new type of adenylate-forming enzyme.
J.Biol.Chem., 288, 2013
3OUB
DownloadVisualize
BU of 3oub by Molmil
MDR769 HIV-1 protease complexed with NC/p1 hepta-peptide
Descriptor: MDR HIV-1 protease, NC/p1 substrate peptide
Authors:Liu, Z, Wang, Y, Brunzelle, J, Kovari, I.A, Kovari, L.C.
Deposit date:2010-09-14
Release date:2011-03-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease.
Protein J., 30, 2011
3OUD
DownloadVisualize
BU of 3oud by Molmil
MDR769 HIV-1 protease complexed with CA/p2 hepta-peptide
Descriptor: CA/p2 substrate peptide, MDR HIV-1 protease
Authors:Liu, Z, Wang, Y, Brunzelle, J, Kovari, I.A, Kovari, L.C.
Deposit date:2010-09-14
Release date:2011-03-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease.
Protein J., 30, 2011
4L1A
DownloadVisualize
BU of 4l1a by Molmil
Crystallographic study of multi-drug resistant HIV-1 protease Lopinavir complex: mechanism of drug recognition and resistance
Descriptor: MDR769 HIV-1 protease, N-{1-BENZYL-4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-5-PHENYL-PENTYL}-3-METHYL-2-(2-OXO-TETRAHYDRO-PYRIMIDIN-1-YL)-BUTYRAMIDE
Authors:Liu, Z, Yedidi, R.S, Wang, Y, Dewdney, T, Reiter, S, Brunzelle, J, Kovari, I, Kovari, L.
Deposit date:2013-06-03
Release date:2014-04-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic study of multi-drug resistant HIV-1 protease lopinavir complex: mechanism of drug recognition and resistance.
Biochem.Biophys.Res.Commun., 437, 2013
3OU4
DownloadVisualize
BU of 3ou4 by Molmil
MDR769 HIV-1 protease complexed with TF/PR hepta-peptide
Descriptor: HIV-1 protease, TF/PR substrate peptide
Authors:Liu, Z, Wang, Y, Brunzelle, J, Kovari, I.A, Kovari, L.C.
Deposit date:2010-09-14
Release date:2011-03-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease.
Protein J., 30, 2011
4IR7
DownloadVisualize
BU of 4ir7 by Molmil
Crystal Structure of Mtb FadD10 in Complex with Dodecanoyl-AMP
Descriptor: 5'-O-[(S)-(dodecanoyloxy)(hydroxy)phosphoryl]adenosine, Long chain fatty acid CoA ligase FadD10, MAGNESIUM ION
Authors:Liu, Z, Wang, F, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2013-01-14
Release date:2013-05-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of Mycobacterium tuberculosis FadD10 protein reveal a new type of adenylate-forming enzyme.
J.Biol.Chem., 288, 2013
5ZAL
DownloadVisualize
BU of 5zal by Molmil
Cryo-EM structure of human Dicer and its complexes with a pre-miRNA substrate
Descriptor: Endoribonuclease Dicer, RISC-loading complex subunit TARBP2, RNA (73-mer)
Authors:Liu, Z, Wang, J, Cheng, H, Ke, X, Sun, L, Zhang, Q.C, Wang, H.-W.
Deposit date:2018-02-07
Release date:2018-05-09
Last modified:2020-08-05
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Cryo-EM Structure of Human Dicer and Its Complexes with a Pre-miRNA Substrate.
Cell, 173, 2018
5ZAK
DownloadVisualize
BU of 5zak by Molmil
Cryo-EM structure of human Dicer and its complexes with a pre-miRNA substrate
Descriptor: Endoribonuclease Dicer, RISC-loading complex subunit TARBP2
Authors:Liu, Z, Wang, J, Cheng, H, Ke, X, Sun, L, Zhang, Q.C, Wang, H.-W.
Deposit date:2018-02-07
Release date:2018-05-09
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Cryo-EM Structure of Human Dicer and Its Complexes with a Pre-miRNA Substrate.
Cell, 173, 2018
6AO4
DownloadVisualize
BU of 6ao4 by Molmil
Crystal structure of the human gasdermin D C-terminal domain
Descriptor: Gasdermin-D
Authors:Liu, Z, Wang, C, Yang, J, Xiao, T.S.
Deposit date:2017-08-15
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Structures of the Gasdermin D C-Terminal Domains Reveal Mechanisms of Autoinhibition.
Structure, 26, 2018
6AO3
DownloadVisualize
BU of 6ao3 by Molmil
Crystal structure of the murine gasdermin D C-terminal domain
Descriptor: Gasdermin-D
Authors:Liu, Z, Wang, C, Yang, J, Xiao, T.S.
Deposit date:2017-08-15
Release date:2018-04-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structures of the Gasdermin D C-Terminal Domains Reveal Mechanisms of Autoinhibition.
Structure, 26, 2018
4OU6
DownloadVisualize
BU of 4ou6 by Molmil
Crystal structure of DnaT84-153-dT10 ssDNA complex form 1
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Primosomal protein 1
Authors:Liu, Z, Chen, P, Niu, L, Teng, M, Li, X.
Deposit date:2014-02-15
Release date:2014-08-13
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structure of DnaT84-153-dT10 ssDNA complex reveals a novel single-stranded DNA binding mode.
Nucleic Acids Res., 42, 2014
4OU7
DownloadVisualize
BU of 4ou7 by Molmil
Crystal structure of DnaT84-153-dT10 ssDNA complex reveals a novel single-stranded DNA binding mode
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Primosomal protein 1
Authors:Liu, Z, Chen, P, Niu, L, Teng, M, Li, X.
Deposit date:2014-02-15
Release date:2014-08-13
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Crystal structure of DnaT84-153-dT10 ssDNA complex reveals a novel single-stranded DNA binding mode.
Nucleic Acids Res., 42, 2014
4NN2
DownloadVisualize
BU of 4nn2 by Molmil
Protein Crystal Structure of Human Borjeson-Forssman-Lehmann Syndrome Associated Protein PHF6
Descriptor: GLYCEROL, PHD finger protein 6, ZINC ION
Authors:Liu, Z, Li, F, Zhang, J, Mei, Y, Wu, J, Shi, Y.
Deposit date:2013-11-16
Release date:2014-02-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.472 Å)
Cite:Crystal Structure of the second extended PHD domain of human PHF6 protein
J.Biol.Chem., 2014
4R7A
DownloadVisualize
BU of 4r7a by Molmil
Crystal Structure of RBBP4 bound to PHF6 peptide
Descriptor: GLYCEROL, Histone-binding protein RBBP4, PHD finger protein 6
Authors:Liu, Z, Li, F, Zhang, B, Li, S, Wu, J, Shi, Y.
Deposit date:2014-08-27
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Basis of Plant Homeodomain Finger 6 (PHF6) Recognition by the Retinoblastoma Binding Protein 4 (RBBP4) Component of the Nucleosome Remodeling and Deacetylase (NuRD) Complex
J.Biol.Chem., 290, 2015
7FD2
DownloadVisualize
BU of 7fd2 by Molmil
Cryo-EM structure of an alphavirus, Getah virus
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Liu, Z, Liu, C, Wang, A.
Deposit date:2021-07-15
Release date:2022-08-10
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Structure of infective Getah virus at 2.8 angstrom resolution determined by cryo-electron microscopy.
Cell Discov, 8, 2022
6JUE
DownloadVisualize
BU of 6jue by Molmil
The complex of PDZ and PBM
Descriptor: Partitioning defective 3 homolog, SULFATE ION, THR-ILE-ILE-THR-LEU
Authors:Liu, Z.
Deposit date:2019-04-13
Release date:2020-04-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.549 Å)
Cite:Par complex cluster formation mediated by phase separation.
Nat Commun, 11, 2020
7UIB
DownloadVisualize
BU of 7uib by Molmil
Crystal structure of BoNT/E receptor binding domain in complex with SV2, VHH, and sialic acid
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, N-acetyl-beta-neuraminic acid, ...
Authors:Liu, Z, Jin, R, Chen, P.
Deposit date:2022-03-29
Release date:2023-04-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Structural basis for botulinum neurotoxin E recognition of synaptic vesicle protein 2.
Nat Commun, 14, 2023
7UIA
DownloadVisualize
BU of 7uia by Molmil
Crystal structure of BoNT/E receptor binding domain in complex with SV2 and VHH
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Liu, Z, Jin, R, Chen, P.
Deposit date:2022-03-28
Release date:2023-04-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structural basis for botulinum neurotoxin E recognition of synaptic vesicle protein 2.
Nat Commun, 14, 2023
6N9N
DownloadVisualize
BU of 6n9n by Molmil
Crystal structure of murine GSDMD
Descriptor: Gasdermin-D
Authors:Liu, Z, Wang, C, Yang, J, Xiao, T.S.
Deposit date:2018-12-03
Release date:2019-06-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structures of the Full-Length Murine and Human Gasdermin D Reveal Mechanisms of Autoinhibition, Lipid Binding, and Oligomerization.
Immunity, 51, 2019
6N9O
DownloadVisualize
BU of 6n9o by Molmil
Crystal structure of human GSDMD
Descriptor: Gasdermin-D
Authors:Liu, Z, Wang, C, Yang, J, Xiao, T.S.
Deposit date:2018-12-03
Release date:2019-06-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal Structures of the Full-Length Murine and Human Gasdermin D Reveal Mechanisms of Autoinhibition, Lipid Binding, and Oligomerization.
Immunity, 51, 2019
8FZW
DownloadVisualize
BU of 8fzw by Molmil
Thaumatin crystallized in cyclic olefin copolymer-based microfluidic chips
Descriptor: L(+)-TARTARIC ACID, Thaumatin I
Authors:Liu, Z, Gu, K, Shelby, M.L, Gilbile, D, Lyubimov, A.Y, Russi, S, Cohen, A.E, Coleman, M.A, Frank, M, Kuhl, T.L.
Deposit date:2023-01-30
Release date:2023-10-18
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:A user-friendly plug-and-play cyclic olefin copolymer-based microfluidic chip for room-temperature, fixed-target serial crystallography.
Acta Crystallogr D Struct Biol, 79, 2023
8IGG
DownloadVisualize
BU of 8igg by Molmil
C2 reconstruction of the concave tetramer in the cube-like assembly of 201Phi2-1 gp105
Descriptor: Chimallin
Authors:Liu, Z, Xiang, Y.
Deposit date:2023-02-20
Release date:2023-05-03
Last modified:2023-05-17
Method:ELECTRON MICROSCOPY (4.09 Å)
Cite:Structural studies of the nucleus-like assembly of jumbo bacteriophage 201 phi 2-1.
Front Microbiol, 14, 2023
3GBS
DownloadVisualize
BU of 3gbs by Molmil
Crystal structure of Aspergillus oryzae cutinase
Descriptor: Cutinase 1
Authors:Gosser, Y, Lu, Z, Alemu, G, Li, H, Kong, X, Liu, Z, Montclare, J.
Deposit date:2009-02-20
Release date:2009-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and functional studies of Aspergillus oryzae cutinase: enhanced thermostability and hydrolytic activity of synthetic ester and polyester degradation.
J.Am.Chem.Soc., 131, 2009
1VRY
DownloadVisualize
BU of 1vry by Molmil
Second and Third Transmembrane Domains of the Alpha-1 Subunit of Human Glycine Receptor
Descriptor: Glycine receptor alpha-1 chain
Authors:Ma, D, Liu, Z, Li, L, Tang, P, Xu, Y.
Deposit date:2005-07-20
Release date:2005-07-26
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure and Dynamics of the Second and Third Transmembrane Domains of Human Glycine Receptor.
Biochemistry, 44, 2005

219515

PDB entries from 2024-05-08

PDB statisticsPDBj update infoContact PDBjnumon