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PDB: 763 results

4RSU
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Crystal structure of the light and hvem complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ...
Authors:Liu, W, Ramagoal, U.A, Himmel, D, Bonanno, J.B, Nathenson, S.G, Almo, S.C, Atoms-to-Animals: The Immune Function Network (IFN), New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-11-11
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:HVEM structures and mutants reveal distinct functions of binding to LIGHT and BTLA/CD160.
J.Exp.Med., 218, 2021
4WOQ
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Crystal Structures of CdNal from Clostridium difficile in complex with ketobutyric
Descriptor: 2-KETOBUTYRIC ACID, N-acetylneuraminate lyase
Authors:Liu, W.D, Guo, R.T, Cui, Y.F, Chen, X, Wu, Q.Q, Zhu, D.M.
Deposit date:2014-10-16
Release date:2015-10-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of CdNal from Clostridium difficile in complex with ketobutyric
to be published
4W4S
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BU of 4w4s by Molmil
Crystal structure of ent-kaurene synthase BJKS from bradyrhizobium japonicum in complex with BPH-629
Descriptor: Uncharacterized protein blr2150, [2-(3-DIBENZOFURAN-4-YL-PHENYL)-1-HYDROXY-1-PHOSPHONO-ETHYL]-PHOSPHONIC ACID
Authors:Liu, W, Zheng, Y, Huang, C.H, Guo, R.T.
Deposit date:2014-08-15
Release date:2015-01-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure, function and inhibition of ent-kaurene synthase from Bradyrhizobium japonicum.
Sci Rep, 4, 2014
4W4R
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BU of 4w4r by Molmil
Crystal structure of ent-kaurene synthase BJKS from bradyrhizobium japonicum
Descriptor: Uncharacterized protein blr2150
Authors:Liu, W, Zheng, Y, Huang, C.H, Ko, T.P, Guo, R.T.
Deposit date:2014-08-15
Release date:2015-01-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structure, function and inhibition of ent-kaurene synthase from Bradyrhizobium japonicum.
Sci Rep, 4, 2014
4RM0
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BU of 4rm0 by Molmil
Crystal structure of Norovirus OIF P domain in complex with Lewis a trisaccharide
Descriptor: Capsid protein, beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-alpha-D-glucopyranose, beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Liu, W, Chen, Y, Tan, M, Xia, M, Li, X, Jiang, X, Rao, Z.
Deposit date:2014-10-18
Release date:2015-06-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:A Unique Human Norovirus Lineage with a Distinct HBGA Binding Interface.
Plos Pathog., 11, 2015
4RLZ
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BU of 4rlz by Molmil
Crystal structure of Norovirus OIF P domain
Descriptor: Capsid protein, GLYCEROL
Authors:Liu, W, Chen, Y, Tan, M, Xia, M, Li, X, Jiang, X, Rao, Z.
Deposit date:2014-10-18
Release date:2015-06-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:A Unique Human Norovirus Lineage with a Distinct HBGA Binding Interface.
Plos Pathog., 11, 2015
7BZ0
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BU of 7bz0 by Molmil
complex structure of alginate lyase AlyF-OU02 with G6
Descriptor: Alginate lyase AlyF-OU02, CALCIUM ION, alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid
Authors:Liu, W, Lyu, Q, Zhang, K.
Deposit date:2020-04-26
Release date:2021-03-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into the substrate-binding cleft of AlyF reveal the first long-chain alginate-binding mode.
Acta Crystallogr D Struct Biol, 77, 2021
1EXE
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BU of 1exe by Molmil
SOLUTION STRUCTURE OF A MUTANT OF TRANSCRIPTION FACTOR 1.
Descriptor: TRANSCRIPTION FACTOR 1
Authors:Liu, W, Vu, H.M, Geiduschek, E.P, Kearns, D.R.
Deposit date:2000-05-02
Release date:2000-10-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of a mutant of transcription factor 1: implications for enhanced DNA binding.
J.Mol.Biol., 302, 2000
4WOZ
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BU of 4woz by Molmil
Crystal Structures of CdNal from Clostridium difficile in complex with mannosamine
Descriptor: 2-(ACETYLAMINO)-2-DEOXY-D-MANNOSE, N-acetylneuraminate lyase
Authors:Liu, W.D, Guo, R.T, Cui, Y.F, Chen, X, Wu, Q.Q, Zhu, D.M.
Deposit date:2014-10-17
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal Structures of CdNal from Clostridium difficile in complex with mannosamine
to be published
6ITG
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BU of 6itg by Molmil
a new alginate lyase (PL6) from Vibrio splendidus OU02
Descriptor: Alginate lyase, GLYCEROL, MALONATE ION
Authors:Liu, W.Z, Lyu, Q.Q.
Deposit date:2018-11-23
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structural insights into a novel Ca2+-independent PL-6 alginate lyase from Vibrio OU02 identify the possible subsites responsible for product distribution.
Biochim Biophys Acta Gen Subj, 1863, 2019
6W19
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BU of 6w19 by Molmil
Structures of Capsid and Capsid-Associated Tegument Complex inside the Epstein-Barr Virus
Descriptor: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
Authors:Liu, W, Cui, Y.X, Wang, C.Y, Li, Z.H, Gong, D.Y, Dai, X.H, Bi, G.Q, Sun, R, Zhou, Z.H.
Deposit date:2020-03-03
Release date:2020-07-15
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (5.5 Å)
Cite:Structures of capsid and capsid-associated tegument complex inside the Epstein-Barr virus.
Nat Microbiol, 5, 2020
6W2D
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BU of 6w2d by Molmil
Structures of Capsid and Capsid-Associated Tegument Complex inside the Epstein-Barr Virus
Descriptor: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
Authors:Liu, W, Cui, Y.X, Wang, C.Y, Li, Z.H, Gong, D.Y, Dai, X.H, Bi, G.Q, Sun, R, Zhou, Z.H.
Deposit date:2020-03-05
Release date:2020-07-15
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structures of capsid and capsid-associated tegument complex inside the Epstein-Barr virus.
Nat Microbiol, 5, 2020
6W2E
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BU of 6w2e by Molmil
Structures of Capsid and Capsid-Associated Tegument Complex inside the Epstein-Barr Virus
Descriptor: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
Authors:Liu, W, Cui, Y.X, Wang, C.Y, Li, Z.H, Gong, D.Y, Dai, X.H, Bi, G.Q, Sun, R, Zhou, Z.H.
Deposit date:2020-03-05
Release date:2020-07-15
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structures of capsid and capsid-associated tegument complex inside the Epstein-Barr virus.
Nat Microbiol, 5, 2020
7TDO
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BU of 7tdo by Molmil
Cryo-EM structure of transmembrane AAA+ protease FtsH in the ADP state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent zinc metalloprotease FtsH
Authors:Liu, W, Schoonen, M, Wang, T, McSweeney, S, Liu, Q.
Deposit date:2022-01-02
Release date:2022-04-06
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Cryo-EM structure of transmembrane AAA+ protease FtsH in the ADP state.
Commun Biol, 5, 2022
5L19
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BU of 5l19 by Molmil
Crystal Structure of a human FasL mutant
Descriptor: SULFATE ION, Tumor necrosis factor ligand superfamily member 6, ZINC ION
Authors:Liu, W, Bonanno, J.B, Almo, S.C.
Deposit date:2016-07-28
Release date:2016-09-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Complex of Human FasL and Its Decoy Receptor DcR3.
Structure, 24, 2016
5Z8F
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BU of 5z8f by Molmil
Solution structure for the unique dimeric 4:2 complex of a platinum(II)-based tripod bound to a hybrid-1 human telomeric G-quadruplex
Descriptor: 4-[1-(2,5,8-triazonia-1$l^4-platinabicyclo[3.3.0]octan-1-yl)pyridin-1-ium-4-yl]-N,N-bis[4-[1-(2,5,8-triazonia-1$l^4-platinabicyclo[3.3.0]octan-1-yl)pyridin-1-ium-4-yl]phenyl]aniline, G-quadruplex DNA (26-MER)
Authors:Liu, W.T, Zhong, Y.F, Liu, L.Y, Zeng, W.J, Wang, F.Y, Yang, D.Z, Mao, Z.W.
Deposit date:2018-01-31
Release date:2018-09-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structures of multiple G-quadruplex complexes induced by a platinum(II)-based tripod reveal dynamic binding
Nat Commun, 9, 2018
5Z80
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BU of 5z80 by Molmil
Solution structure for the 1:1 complex of a platinum(II)-based tripod bound to a hybrid-1 human telomeric G-quadruplex
Descriptor: 4-[1-(2,5,8-triazonia-1$l^4-platinabicyclo[3.3.0]octan-1-yl)pyridin-1-ium-4-yl]-N,N-bis[4-[1-(2,5,8-triazonia-1$l^4-platinabicyclo[3.3.0]octan-1-yl)pyridin-1-ium-4-yl]phenyl]aniline, G-quadruplex DNA (26-MER)
Authors:Liu, W.T, Zhong, Y.F, Liu, L.Y, Zeng, W.J, Wang, F.Y, Yang, D.Z, Mao, Z.W.
Deposit date:2018-01-30
Release date:2018-09-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structures of multiple G-quadruplex complexes induced by a platinum(II)-based tripod reveal dynamic binding
Nat Commun, 9, 2018
8WOR
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BU of 8wor by Molmil
Cryo-EM structure of human SIDT1 protein with C2 symmetry at neutral pH
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Liu, W, Tang, M, Wang, J, Zhang, X, Wu, S, Ru, H.
Deposit date:2023-10-07
Release date:2024-03-20
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Structural insights into cholesterol transport and hydrolase activity of a putative human RNA transport protein SIDT1.
Cell Discov, 10, 2024
8WOQ
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BU of 8woq by Molmil
Cryo-EM structure of human SIDT1 protein with C1 symmetry at neutral pH
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Liu, W, Tang, M, Wang, J, Zhang, X, Wu, S, Ru, H.
Deposit date:2023-10-07
Release date:2024-03-20
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structural insights into cholesterol transport and hydrolase activity of a putative human RNA transport protein SIDT1.
Cell Discov, 10, 2024
5L36
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Crystal Structure of a human FasL mutant in complex with human DcR3
Descriptor: SODIUM ION, Tumor necrosis factor ligand superfamily member 6, Tumor necrosis factor receptor superfamily member 6B
Authors:Liu, W, Bonanno, J.B, Almo, S.C.
Deposit date:2016-08-03
Release date:2016-09-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structure of the Complex of Human FasL and Its Decoy Receptor DcR3.
Structure, 24, 2016
1M0P
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Structure of Dialkylglycine Decarboxylase Complexed with 1-Amino-1-phenylethanephosphonate
Descriptor: (1R)-1-[((1E)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLENE)AMINO]-1-PHENYLETHYLPHOSPHONIC ACID, 2,2-Dialkylglycine Decarboxylase, POTASSIUM ION, ...
Authors:Liu, W, Rogers, C.J, Fisher, A.J, Toney, M.D.
Deposit date:2002-06-13
Release date:2002-10-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Aminophosphonate Inhibitors of Dialkylglycine Decarboxylase: Structural Basis for Slow Binding Inhibition
Biochemistry, 41, 2002
1M0Q
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Structure of Dialkylglycine Decarboxylase Complexed with S-1-aminoethanephosphonate
Descriptor: (1S)-1-[((1E)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLENE)AMINO]ETHYLPHOSPHONIC ACID, 2,2-Dialkylglycine Decarboxylase, POTASSIUM ION, ...
Authors:Liu, W, Rogers, C.J, Fisher, A.J, Toney, M.D.
Deposit date:2002-06-13
Release date:2002-10-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Aminophosphonate Inhibitors of Dialkylglycine Decarboxylase: Structural Basis for Slow Binding Inhibition
Biochemistry, 41, 2002
1M0N
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BU of 1m0n by Molmil
Structure of Dialkylglycine Decarboxylase Complexed with 1-Aminocyclopentanephosphonate
Descriptor: 1-[((1E)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLENE)AMINO]CYCLOPENTYLPHOSPHONIC ACID, 2,2-Dialkylglycine decarboxylase, POTASSIUM ION, ...
Authors:Liu, W, Rogers, C.J, Fisher, A.J, Toney, M.D.
Deposit date:2002-06-13
Release date:2002-10-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Aminophosphonate Inhibitors of Dialkylglycine Decarboxylase: Structural Basis for Slow Binding Inhibition
Biochemistry, 41, 2002
1M0O
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BU of 1m0o by Molmil
Structure of Dialkylglycine Decarboxylase Complexed with 1-Amino-1-methylpropanephosphonate
Descriptor: (1R)-1-[((1E)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLENE)AMINO]-1-METHYLPROPYLPHOSPHONIC ACID, 2,2-Dialkylglycine decarboxylase, POTASSIUM ION, ...
Authors:Liu, W, Rogers, C.J, Fisher, A.J, Toney, M.D.
Deposit date:2002-06-13
Release date:2002-10-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Aminophosphonate Inhibitors of Dialkylglycine Decarboxylase: Structural Basis for Slow Binding Inhibition
Biochemistry, 41, 2002
5ZU5
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BU of 5zu5 by Molmil
Crystal structure of a full length alginate lyase with CBM domain
Descriptor: GLYCEROL, SODIUM ION, alginate lyase
Authors:Liu, W, Lyu, Q, Li, Z.
Deposit date:2018-05-07
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and biochemical characterization of a multidomain alginate lyase reveals a novel role of CBM32 in CAZymes
Biochim. Biophys. Acta, 1862, 2018

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