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PDB: 220 results

1LJX
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BU of 1ljx by Molmil
THE STRUCTURE OF D(TPGPCPGPCPA)2 AT 293K: COMPARISON OF THE EFFECT OF SEQUENCE AND TEMPERATURE
Descriptor: 5'-D(*TP*GP*CP*GP*CP*A)-3', MAGNESIUM ION
Authors:Thiyagarajan, S, Satheesh Kumar, P, Rajan, S.S, Gautham, N.
Deposit date:2002-04-23
Release date:2002-05-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure of d(TGCGCA)2 at 293 K: comparison of the effects of sequence and temperature.
Acta Crystallogr.,Sect.D, 58, 2002
7L6Q
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BU of 7l6q by Molmil
Unliganded ELIC in styrene-maleic-acid nanodiscs at 2.5-Angstrom resolution
Descriptor: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, CARDIOLIPIN, Gamma-aminobutyric-acid receptor subunit beta-1
Authors:Grosman, C, Kumar, P.
Deposit date:2020-12-23
Release date:2021-06-23
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structure and function at the lipid-protein interface of a pentameric ligand-gated ion channel.
Proc.Natl.Acad.Sci.USA, 118, 2021
5FTW
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BU of 5ftw by Molmil
Crystal structure of glutamate O-methyltransferase in complex with S- adenosyl-L-homocysteine (SAH) from Bacillus subtilis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHEMOTAXIS PROTEIN METHYLTRANSFERASE, GLYCEROL, ...
Authors:Sharma, R, Dhindwal, S, Batra, M, Aggarwal, M, Kumar, P, Tomar, S.
Deposit date:2016-01-18
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Pentapeptide-Independent Chemotaxis Receptor Methyltransferase (Cher) Reveals Idiosyncratic Structural Determinants for Receptor Recognition.
J.Struct.Biol., 196, 2016
5G4B
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BU of 5g4b by Molmil
Crystal structure of Aura virus capsid protein in complex with piperazine.
Descriptor: CAPSID PROTEIN, piperazine
Authors:Aggarwal, M, Kumar, P, Tomar, S.
Deposit date:2016-05-08
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal Structure of Capsid Protein from Aura Virus in Complex with Piperazine
To be Published
7DLK
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BU of 7dlk by Molmil
Crystal Structure of veratryl alcohol bound Dye Decolorizing peroxidase from Bacillus subtilis
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Dhankhar, P, Dalal, V, Kumar, P.
Deposit date:2020-11-27
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of dye-decolorizing peroxidase from Bacillus subtilis in complex with veratryl alcohol.
Int.J.Biol.Macromol., 193, 2021
1X1V
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BU of 1x1v by Molmil
Structure Of Banana Lectin- Methyl-Alpha-Mannose Complex
Descriptor: HEXANE-1,6-DIOL, ZINC ION, lectin, ...
Authors:Singh, D.D, Saikrishnan, K, Kumar, P, Surolia, A, Sekar, K, Vijayan, M.
Deposit date:2005-04-14
Release date:2005-11-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Unusual sugar specificity of banana lectin from Musa paradisiaca and its probable evolutionary origin. Crystallographic and modelling studies
Glycobiology, 15, 2005
7E5Q
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BU of 7e5q by Molmil
Crystal Structure of Dye Decolorizing peroxidase from Bacillus subtilis at acidic pH
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CITRIC ACID, ...
Authors:Dhankhar, P, Dalal, V, Kumar, P.
Deposit date:2021-02-19
Release date:2022-08-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights at acidic pH of dye-decolorizing peroxidase from Bacillus subtilis.
Proteins, 2022
6V03
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BU of 6v03 by Molmil
ELIC-propylammonium complex in POPC-only nanodiscs
Descriptor: 3-AMINOPROPANE, Gamma-aminobutyric-acid receptor subunit beta-1
Authors:Grosman, C, Kumar, P.
Deposit date:2019-11-18
Release date:2020-01-15
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of a lipid-sensitive pentameric ligand-gated ion channel embedded in a phosphatidylcholine-only bilayer.
Proc.Natl.Acad.Sci.USA, 117, 2020
6V0B
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BU of 6v0b by Molmil
Unliganded ELIC in POPC-only nanodiscs.
Descriptor: Gamma-aminobutyric-acid receptor subunit beta-1
Authors:Grosman, C, Kumar, P.
Deposit date:2019-11-18
Release date:2020-01-15
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structures of a lipid-sensitive pentameric ligand-gated ion channel embedded in a phosphatidylcholine-only bilayer.
Proc.Natl.Acad.Sci.USA, 117, 2020
3MGZ
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BU of 3mgz by Molmil
Crystal structure of DHBPS domain of bi-functional DHBPS/GTP cyclohydrolase II from Mycobacterium tuberculosis at pH 4.0
Descriptor: 3,4-dihydroxy-2-butanone 4-phosphate synthase, SULFATE ION
Authors:Singh, M, Kumar, P, Karthikeyan, S.
Deposit date:2010-04-07
Release date:2011-02-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structural basis for pH dependent monomer-dimer transition of 3,4-dihydroxy 2-butanone-4-phosphate synthase domain from Mycobacterium tuberculosis
J.Struct.Biol., 174, 2011
7V28
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BU of 7v28 by Molmil
Crystal Structure of phthalate dioxygenase in complex with terephthalate
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Rieske (2Fe-2S) domain protein, ...
Authors:Mahto, J.K, Kumar, P.
Deposit date:2021-08-07
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Molecular insights into substrate recognition and catalysis by phthalate dioxygenase from Comamonas testosteroni.
J.Biol.Chem., 297, 2021
7V25
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BU of 7v25 by Molmil
Crystal Structure of phthalate dioxygenase in complex with phthalate
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, PHTHALIC ACID, ...
Authors:Mahto, J.K, Kumar, P.
Deposit date:2021-08-07
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Molecular insights into substrate recognition and catalysis by phthalate dioxygenase from Comamonas testosteroni.
J.Biol.Chem., 297, 2021
5D79
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BU of 5d79 by Molmil
Structure of BBE-like #28 from Arabidopsis thaliana
Descriptor: Berberine bridge enzyme-like protein, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Daniel, B, Kumar, P, Gruber, K.
Deposit date:2015-08-13
Release date:2016-06-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.849 Å)
Cite:Structure of a Berberine Bridge Enzyme-Like Enzyme with an Active Site Specific to the Plant Family Brassicaceae.
Plos One, 11, 2016
2GES
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BU of 2ges by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-I (RT)
Descriptor: Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
Authors:Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
Deposit date:2006-03-20
Release date:2006-06-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GET
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BU of 2get by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-I (LT)
Descriptor: GLYCEROL, Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
Authors:Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
Deposit date:2006-03-20
Release date:2006-06-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GEV
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BU of 2gev by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-II (LT)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Pantothenate kinase, ...
Authors:Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
Deposit date:2006-03-20
Release date:2006-06-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GEU
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BU of 2geu by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-II (RT)
Descriptor: Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
Authors:Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
Deposit date:2006-03-20
Release date:2006-06-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
4C44
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BU of 4c44 by Molmil
Crystal Structure of Truncated Plant Hemoglobin from Arabidopsis thaliana
Descriptor: 2-ON-2 HEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION
Authors:Mukhi, N, Dhindwal, S, Kumar, P, Kaur, J, Kundu, S.
Deposit date:2013-08-30
Release date:2014-09-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:X-Ray Crystallographic Structural Characteristics of Truncated Hemoglobin from Arabidopsis Thaliana
To be Published
7FHR
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BU of 7fhr by Molmil
Crystal Structure of a Rieske Oxygenase from Cupriavidus metallidurans
Descriptor: 1,2-ETHANEDIOL, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Mahto, J.K, Dhankhar, P, Kumar, P.
Deposit date:2021-07-30
Release date:2021-12-15
Last modified:2022-02-16
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Molecular insights into substrate recognition and catalysis by phthalate dioxygenase from Comamonas testosteroni.
J.Biol.Chem., 297, 2021
6MB4
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BU of 6mb4 by Molmil
Binary (sisomicin) structure of AAC-IIIb
Descriptor: (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, Aac(3)-IIIb protein
Authors:Cuneo, M.J, Kumar, P.
Deposit date:2018-08-29
Release date:2018-11-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Encoding of Promiscuity in an Aminoglycoside Acetyltransferase.
J. Med. Chem., 61, 2018
6MB6
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BU of 6mb6 by Molmil
AAC-IIIb binary with CoASH
Descriptor: Aac(3)-IIIb protein, COENZYME A, MALONATE ION
Authors:Cuneo, M.J, Kumar, P.
Deposit date:2018-08-29
Release date:2018-11-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Encoding of Promiscuity in an Aminoglycoside Acetyltransferase.
J. Med. Chem., 61, 2018
6LLA
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BU of 6lla by Molmil
Crystal structure of Providencia alcalifaciens 3-dehydroquinate synthase (DHQS) in complex with Mg2+ and NAD
Descriptor: 1,2-ETHANEDIOL, 3-dehydroquinate synthase, DI(HYDROXYETHYL)ETHER, ...
Authors:Neetu, N, Katiki, M, Kumar, P.
Deposit date:2019-12-22
Release date:2020-07-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural and Biochemical Analyses Reveal that Chlorogenic Acid Inhibits the Shikimate Pathway.
J.Bacteriol., 202, 2020
6MB5
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BU of 6mb5 by Molmil
AAC-IIIb binary with NEOMYCIN
Descriptor: Aac(3)-IIIb protein, NEOMYCIN
Authors:Cuneo, M.J, Kumar, P.
Deposit date:2018-08-29
Release date:2018-11-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Encoding of Promiscuity in an Aminoglycoside Acetyltransferase.
J. Med. Chem., 61, 2018
6MB7
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BU of 6mb7 by Molmil
Binary (paromomycin) structure of AAC-IIIb
Descriptor: Aac(3)-IIIb protein, PAROMOMYCIN
Authors:Cuneo, M.J, Kumar, P.
Deposit date:2018-08-29
Release date:2018-11-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Encoding of Promiscuity in an Aminoglycoside Acetyltransferase.
J. Med. Chem., 61, 2018
6MB9
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BU of 6mb9 by Molmil
Ternary (neomycin/CoA) structure of AAC-IIIb
Descriptor: Aac(3)-IIIb protein, COENZYME A, NEOMYCIN, ...
Authors:Cuneo, M.J, Kumar, P.
Deposit date:2018-08-29
Release date:2018-11-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Encoding of Promiscuity in an Aminoglycoside Acetyltransferase.
J. Med. Chem., 61, 2018

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