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PDB: 279 results

7TJF
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BU of 7tjf by Molmil
S. cerevisiae ORC bound to 84 bp ARS1 DNA
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA, 84 bp ARS1, ...
Authors:Schmidt, J.M, Yang, R, Kumar, A, Hunker, O, Bleichert, F.
Deposit date:2022-01-16
Release date:2023-01-18
Last modified:2023-02-22
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:A mechanism of origin licensing control through autoinhibition of S. cerevisiae ORC·DNA·Cdc6.
Nat Commun, 13, 2022
6KRA
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BU of 6kra by Molmil
Solution NMR Structure of RMAD4 alpha Defensin
Descriptor: Neutrophil defensin 4
Authors:Agadi, N, Kumar, A, Shukla, V.K.
Deposit date:2019-08-21
Release date:2020-08-26
Method:SOLUTION NMR
Cite:Solution NMR Structure of RMAD4 alpha Defensin.
To Be Published
5CAD
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BU of 5cad by Molmil
Crystal structure of the vicilin from Solanum melongena revealed existence of different anionic ligands in structurally similar pockets
Descriptor: ACETATE ION, MAGNESIUM ION, PYROGLUTAMIC ACID, ...
Authors:Jain, A, Kumar, A, Salunke, D.M.
Deposit date:2015-06-29
Release date:2016-04-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Crystal structure of the vicilin from Solanum melongena reveals existence of different anionic ligands in structurally similar pockets
Sci Rep, 6, 2016
6M1C
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BU of 6m1c by Molmil
Crystal structure of RsmD methyltransferase of M. tuberculosis in complex with sinefungin reveals key interactions
Descriptor: ACETATE ION, Possible methyltransferase (Methylase), SINEFUNGIN
Authors:Bijpuria, S, Khan, S.H, Kumar, A, Taneja, B.
Deposit date:2020-02-25
Release date:2021-06-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Crystal structure of RsmD methyltransferase of M. tuberculosis in complex with sinefungin reveals key interactions
To Be Published
2LGJ
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BU of 2lgj by Molmil
Solution structure of MsPTH
Descriptor: Peptidyl-tRNA hydrolase
Authors:Yadav, R, Pathak, P, Pulavarti, S, Jain, A, Kumar, A, Shukla, V, Arora, A.
Deposit date:2011-07-27
Release date:2012-08-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure and backbone dynamics of Peptidyl t-RNA hydrolase from Mycobacterium smegmatis
To be Published
2G15
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BU of 2g15 by Molmil
Structural Characterization of autoinhibited c-Met kinase
Descriptor: activated met oncogene
Authors:Wang, W, Marimuthu, A, Tsai, J, Kumar, A, Krupka, H.I, Zhang, C, Powell, B, Suzuki, Y, Nguyen, H, Tabrizizad, M, Luu, C, West, B.L.
Deposit date:2006-02-13
Release date:2006-03-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural characterization of autoinhibited c-Met kinase produced by coexpression in bacteria with phosphatase.
Proc.Natl.Acad.Sci.Usa, 103, 2006
8J9D
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BU of 8j9d by Molmil
Crystal structure of M61 peptidase (bestatin-bound) from Xanthomonas campestris
Descriptor: 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ...
Authors:Yadav, P, Kumar, A, Kulkarni, B.S, Jamdar, S.N, Makde, R.D.
Deposit date:2023-05-03
Release date:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a newly identified M61 family aminopeptidase with broad substrate specificity that is solely responsible for recycling acidic amino acids.
Febs J., 2024
8J9C
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BU of 8j9c by Molmil
Crystal structure of M61 peptidase (apo-form) from Xanthomonas campestris
Descriptor: GLYCEROL, Putative glycyl aminopeptidase, SODIUM ION, ...
Authors:Yadav, P, Kumar, A, Jamdar, S.N, Makde, R.D.
Deposit date:2023-05-03
Release date:2024-05-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a newly identified M61 family aminopeptidase with broad substrate specificity that is solely responsible for recycling acidic amino acids.
Febs J., 2024
8OUI
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BU of 8oui by Molmil
Complex of ASCT2 with Suppressyn
Descriptor: ALANINE, Neutral amino acid transporter B(0), Suppressyn
Authors:Khare, S, Kumar, A, Reyes, N.
Deposit date:2023-04-23
Release date:2024-05-01
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Receptor-recognition and antiviral mechanisms of retrovirus-derived human proteins.
Nat.Struct.Mol.Biol., 2024
5ULM
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BU of 5ulm by Molmil
Structure of the ASK1 central regulatory region
Descriptor: GLYCEROL, Mitogen-activated protein kinase kinase kinase 5
Authors:Mace, P.D, Kumar, A, Caradoc-Davies, T.T.
Deposit date:2017-01-24
Release date:2017-03-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of autoregulatory scaffolding by apoptosis signal-regulating kinase 1.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7CAY
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BU of 7cay by Molmil
Crystal Structure of Lon N-terminal domain protein from Xanthomonas campestris
Descriptor: ATP-dependent protease
Authors:Singh, R, Sharma, B, Deshmukh, S, Kumar, A, Makde, R.D.
Deposit date:2020-06-10
Release date:2020-10-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of XCC3289 from Xanthomonas campestris: homology with the N-terminal substrate-binding domain of Lon peptidase.
Acta Crystallogr.,Sect.F, 76, 2020
4P8E
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BU of 4p8e by Molmil
Structure of ribB complexed with substrate (Ru5P) and metal ions
Descriptor: 1,2-ETHANEDIOL, 3,4-dihydroxy-2-butanone 4-phosphate synthase, RIBULOSE-5-PHOSPHATE, ...
Authors:Islam, Z, Kumar, A, Singh, S, Salmon, L, Karthikeyan, S.
Deposit date:2014-03-31
Release date:2015-03-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural Basis for Competitive Inhibition of 3,4-Dihydroxy-2-butanone-4-phosphate Synthase from Vibrio cholerae.
J.Biol.Chem., 290, 2015
4P6C
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BU of 4p6c by Molmil
Structure of ribB complexed with inhibitor 4PEH
Descriptor: 3,4-dihydroxy-2-butanone 4-phosphate synthase, 4-PHOSPHO-D-ERYTHRONOHYDROXAMIC ACID
Authors:Islam, Z, Kumar, A, Singh, S, Salmon, L, Karthikeyan, S.
Deposit date:2014-03-24
Release date:2015-03-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structural Basis for Competitive Inhibition of 3,4-Dihydroxy-2-butanone-4-phosphate Synthase from Vibrio cholerae.
J.Biol.Chem., 290, 2015
7CLE
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BU of 7cle by Molmil
Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS
Descriptor: Acid phosphatase, MAGNESIUM ION
Authors:Gaur, N.K, Kumar, A, Sunder, S, Mukhopadhyaya, R, Makde, R.D.
Deposit date:2020-07-20
Release date:2021-11-10
Method:X-RAY DIFFRACTION (2.342 Å)
Cite:Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS
To Be Published
4P77
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BU of 4p77 by Molmil
Structure of ribB complexed with substrate Ru5P
Descriptor: 3,4-dihydroxy-2-butanone 4-phosphate synthase, GLYCEROL, RIBULOSE-5-PHOSPHATE
Authors:Islam, Z, Kumar, A, Singh, S, Salmon, L, Karthikeyan, S.
Deposit date:2014-03-26
Release date:2015-03-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural Basis for Competitive Inhibition of 3,4-Dihydroxy-2-butanone-4-phosphate Synthase from Vibrio cholerae.
J.Biol.Chem., 290, 2015
4P6D
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BU of 4p6d by Molmil
Structure of ribB complexed with PO4 ion
Descriptor: 1,2-ETHANEDIOL, 3,4-dihydroxy-2-butanone 4-phosphate synthase, PHOSPHATE ION
Authors:Islam, Z, Kumar, A, Singh, S, Salmon, L, Karthikeyan, S.
Deposit date:2014-03-24
Release date:2015-03-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structural Basis for Competitive Inhibition of 3,4-Dihydroxy-2-butanone-4-phosphate Synthase from Vibrio cholerae.
J.Biol.Chem., 290, 2015
4P6P
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BU of 4p6p by Molmil
Structure of ribB complexed with inhibitor (4PEH) and metal ions
Descriptor: 3,4-dihydroxy-2-butanone 4-phosphate synthase, 4-PHOSPHO-D-ERYTHRONOHYDROXAMIC ACID, ZINC ION
Authors:Islam, Z, Kumar, A, Singh, S, Salmon, L, Karthikeyan, S.
Deposit date:2014-03-25
Release date:2015-03-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.862 Å)
Cite:Structural Basis for Competitive Inhibition of 3,4-Dihydroxy-2-butanone-4-phosphate Synthase from Vibrio cholerae.
J.Biol.Chem., 290, 2015
4P8J
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BU of 4p8j by Molmil
Structure of ribB
Descriptor: 3,4-dihydroxy-2-butanone 4-phosphate synthase, GLYCEROL
Authors:Islam, Z, Kumar, A, Singh, S, Salmon, L, Karthikeyan, S.
Deposit date:2014-03-31
Release date:2015-03-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural Basis for Competitive Inhibition of 3,4-Dihydroxy-2-butanone-4-phosphate Synthase from Vibrio cholerae.
J.Biol.Chem., 290, 2015
7CZC
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BU of 7czc by Molmil
Crystal structure of apo-FabG from Vibrio harveyi
Descriptor: 3-oxoacyl-ACP reductase FabG, DI(HYDROXYETHYL)ETHER
Authors:Singh, B.K, Kumar, A, Paul, B, Biswas, R, Das, A.K.
Deposit date:2020-09-08
Release date:2021-09-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of apo-FabG from Vibrio harveyi
To Be Published
7FCS
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BU of 7fcs by Molmil
Crystal structure of the N-terminal domain of mutants of Human Apolipoprotein-E (ApoE)
Descriptor: Apolipoprotein E, SODIUM ION
Authors:Cherakara, S, Kumar, A, Garai, K, Ghosh, B.
Deposit date:2021-07-15
Release date:2022-07-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the N-terminal domain of mutants of Human Apolipoprotein-E (ApoE)
To be published
7FCR
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BU of 7fcr by Molmil
Crystal structure of the N-terminal domain of mutants of Human Apolipoprotein-E (ApoE)
Descriptor: Apolipoprotein E, SODIUM ION
Authors:Cherakara, S, Kumar, A, Garai, K, Ghosh, B.
Deposit date:2021-07-15
Release date:2022-07-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of the N-terminal domain of mutants of Human Apolipoprotein-E (ApoE)
To be published
7F7D
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BU of 7f7d by Molmil
Crystal structure of Non-specific class-C acid phosphatase from Sphingobium sp. RSMS bound to Adenosine at pH 5.5
Descriptor: ADENOSINE, Acid phosphatase, DI(HYDROXYETHYL)ETHER, ...
Authors:Gaur, N.K, Kumar, A, Sunder, S, Mukhopadhyaya, R, Makde, R.D.
Deposit date:2021-06-28
Release date:2022-07-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS
To Be Published
7F7B
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BU of 7f7b by Molmil
Crystal structure of Non-specific class-C acid phosphatase from Sphingobium sp. RSMS bound to BIS-TRIS at pH 5.5
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Acid phosphatase, MAGNESIUM ION, ...
Authors:Gaur, N.K, Kumar, A, Sunder, S, Mukhopadhyaya, R, Makde, R.D.
Deposit date:2021-06-28
Release date:2022-07-06
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS
To Be Published
7F7A
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BU of 7f7a by Molmil
Crystal structure of Non-specific class-C acid phosphatase from Sphingobium sp. RSMS bound to Adenine at pH 9
Descriptor: ADENINE, Acid phosphatase, MAGNESIUM ION
Authors:Gaur, N.K, Kumar, A, Sunder, S, Mukhopadhyaya, R, Makde, R.D.
Deposit date:2021-06-28
Release date:2022-07-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS
To Be Published
7F7C
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BU of 7f7c by Molmil
Crystal structure of Non-specific class-C acid phosphatase from Sphingobium sp. RSMS bound to Adenosine at pH 5.5
Descriptor: ADENOSINE, Acid phosphatase, MAGNESIUM ION, ...
Authors:Gaur, N.K, Kumar, A, Sunder, S, Mukhopadhyaya, R, Makde, R.D.
Deposit date:2021-06-28
Release date:2022-07-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS
To Be Published

220113

PDB entries from 2024-05-22

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