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PDB: 81 results

1SMA
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CRYSTAL STRUCTURE OF A MALTOGENIC AMYLASE
Descriptor: MALTOGENIC AMYLASE
Authors:Kim, J.S, Cha, S.S, Oh, B.H.
Deposit date:1999-04-21
Release date:2000-04-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a maltogenic amylase provides insights into a catalytic versatility.
J.Biol.Chem., 274, 1999
1YF2
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Three-dimensional structure of DNA sequence specificity (S) subunit of a type I restriction-modification enzyme and its functional implications
Descriptor: Type I restriction-modification enzyme, S subunit
Authors:Kim, J.S, Degiovanni, A, Jancarik, J, Adams, P.D, Yokota, H.A, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-12-30
Release date:2005-02-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of DNA sequence specificity subunit of a type I restriction-modification enzyme and its functional implications.
Proc.Natl.Acad.Sci.USA, 102, 2005
1T6S
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BU of 1t6s by Molmil
Crystal structure of a conserved hypothetical protein from Chlorobium tepidum
Descriptor: NITRATE ION, conserved hypothetical protein
Authors:Kim, J.S, Shin, D.H, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-05-07
Release date:2004-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of ScpB from Chlorobium tepidum, a protein involved in chromosome partitioning.
Proteins, 62, 2006
5CHI
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BU of 5chi by Molmil
Crystal structure of PF2046 in complex with ssDNA
Descriptor: DNA (5'-D(P*TP*TP*TP*T)-3'), MAGNESIUM ION, Uncharacterized protein
Authors:Kim, J.S, Hwang, K.Y, Lee, W.C.
Deposit date:2015-07-10
Release date:2016-08-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.472 Å)
Cite:Structural basis of two-nucleotide removal of ssDNA by a cryptic RNase H fold 3'-5' exonuclease PF2046 from Pyrococcus furiosus
to be published
1R6V
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BU of 1r6v by Molmil
Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin
Descriptor: CALCIUM ION, subtilisin-like serine protease
Authors:Kim, J.S, Kluskens, L.D, de Vos, W.M, Huber, R, van der Oost, J.
Deposit date:2003-10-17
Release date:2004-10-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin.
J.Mol.Biol., 335, 2004
5XSF
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BU of 5xsf by Molmil
Crystal structure of the 2-keto-3-deoxy-6-phosphogluconate aldolase of Zymomonas mobilis ZM4 with 3-phosphoglycerate
Descriptor: 3-HYDROXYPYRUVIC ACID, 3-PHOSPHOGLYCERIC ACID, KHG/KDPG aldolase, ...
Authors:Seo, P.W, Kim, J.S.
Deposit date:2017-06-14
Release date:2018-06-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.962 Å)
Cite:Crystal structure of the 2-keto-3-deoxy-6-phosphogluconate aldolase of Zymomonas mobilis ZM4
To Be Published
3UFC
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Characterization of a Cas6-related gene from Pyrococcus furiosus
Descriptor: Putative uncharacterized protein
Authors:Park, H.M, Kim, J.S.
Deposit date:2011-11-01
Release date:2012-03-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of a Cas6 paralogous protein from Pyrococcus furiosus
Proteins, 80, 2012
4N06
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BU of 4n06 by Molmil
Crystal structure of Cas1 from Archaeoglobus fulgidus and its nucleolytic activity
Descriptor: CRISPR-associated endonuclease Cas1 1
Authors:Kim, T.Y, Shin, M, Yen, L.H.T, Kim, J.S.
Deposit date:2013-10-01
Release date:2014-01-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of Cas1 from Archaeoglobus fulgidus and characterization of its nucleolytic activity
Biochem.Biophys.Res.Commun., 441, 2013
8I07
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BU of 8i07 by Molmil
Crystal structure of Escherichia coli glyoxylate carboligase double mutant in complex with glycolaldehyde
Descriptor: 2-oxidanylethanal, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ...
Authors:Kim, J.H, Kim, J.S.
Deposit date:2023-01-10
Release date:2023-11-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose.
Int.J.Biol.Macromol., 253, 2023
8I08
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Crystal structure of Escherichia coli glyoxylate carboligase quadruple mutant
Descriptor: 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ...
Authors:Kim, J.H, Kim, J.S.
Deposit date:2023-01-10
Release date:2023-11-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose.
Int.J.Biol.Macromol., 253, 2023
8I01
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BU of 8i01 by Molmil
Crystal structure of Escherichia coli glyoxylate carboligase
Descriptor: 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ...
Authors:Kim, J.H, Kim, J.S.
Deposit date:2023-01-10
Release date:2023-11-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose.
Int.J.Biol.Macromol., 253, 2023
8I05
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BU of 8i05 by Molmil
Crystal structure of Escherichia coli glyoxylate carboligase double mutant
Descriptor: 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ...
Authors:Kim, J.H, Kim, J.S.
Deposit date:2023-01-10
Release date:2023-11-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose.
Int.J.Biol.Macromol., 253, 2023
4Y0M
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BU of 4y0m by Molmil
The reduced form of OxyR regulatory domain from Psedomonas aeruginosa
Descriptor: OxyR
Authors:Jo, I, Kim, J.S, Ha, N.C.
Deposit date:2015-02-06
Release date:2015-04-29
Last modified:2018-05-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural details of the OxyR peroxide-sensing mechanism
Proc.Natl.Acad.Sci.USA, 112, 2015
4XWS
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OxyR regulatory domain C199D mutant from pseudomonas aeruginosa
Descriptor: OxyR
Authors:Jo, I, Kim, J.S, Ha, N.C.
Deposit date:2015-01-29
Release date:2015-04-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.006 Å)
Cite:Structural details of the OxyR peroxide-sensing mechanism
Proc.Natl.Acad.Sci.USA, 112, 2015
3UFB
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BU of 3ufb by Molmil
Crystal structure of a modification subunit of a putative type I restriction enzyme from Vibrio vulnificus YJ016
Descriptor: Type I restriction-modification system methyltransferase subunit
Authors:Park, S.Y, Lee, H.J, Sun, J, Nishi, K, Song, J.M, Kim, J.S.
Deposit date:2011-11-01
Release date:2012-11-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural characterization of a modification subunit of a putative type I restriction enzyme from Vibrio vulnificus YJ016
Acta Crystallogr.,Sect.D, 68, 2012
6AE3
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BU of 6ae3 by Molmil
Crystal structure of GSK3beta complexed with Morin
Descriptor: 2-[2,4-bis(oxidanyl)phenyl]-3,5,7-tris(oxidanyl)chromen-4-one, GLYCEROL, Glycogen synthase kinase-3 beta
Authors:Kim, K.L, Cha, J.S, Kim, J.S, Ahn, J.S, Ha, N.C, Cho, H.S.
Deposit date:2018-08-03
Release date:2018-09-19
Last modified:2018-10-03
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Crystal structure of GSK3 beta in complex with the flavonoid, morin
Biochem. Biophys. Res. Commun., 504, 2018
4WFQ
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Crystal structure of TFIIH subunit
Descriptor: GLYCEROL, SULFATE ION, Suppressor of stem-loop protein 1
Authors:Cho, Y, Kim, J.S, Lim, H.S.
Deposit date:2014-09-17
Release date:2015-02-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the Rad3/XPD regulatory domain of Ssl1/p44
J.Biol.Chem., 290, 2015
4N81
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Another flexible region at the active site of an inositol monophosphatase from Zymomonas mobilis
Descriptor: Inositol monophosphatase, SULFATE ION
Authors:Hwang, H.J, Park, S.Y, Kim, J.S.
Deposit date:2013-10-16
Release date:2014-10-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Crystal structure of cbbF from Zymomonas mobilis and its functional implication
Biochem.Biophys.Res.Commun., 445, 2014
7BVB
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BU of 7bvb by Molmil
Crystal structure of UDP-N-acetylmuramic Acid L-alanine ligase (MurC) from Mycobacterium bovis in complex with UDP-N-acetylglucosamine
Descriptor: UDP-N-acetylmuramate--L-alanine ligase, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE, ZINC ION
Authors:Seo, P.W, Kim, J.S.
Deposit date:2020-04-10
Release date:2020-04-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.191 Å)
Cite:Crystal structures of UDP-N-acetylmuramic acid L-alanine ligase (MurC) from Mycobacterium bovis with and without UDP-N-acetylglucosamine.
Acta Crystallogr D Struct Biol, 77, 2021
7BVA
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BU of 7bva by Molmil
Crystal structure of UDP-N-acetylmuramic Acid L-alanine ligase (MurC) from Mycobacterium bovis
Descriptor: UDP-N-acetylmuramate--L-alanine ligase, ZINC ION
Authors:Seo, P.W, Kim, J.S.
Deposit date:2020-04-10
Release date:2020-04-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Crystal structures of UDP-N-acetylmuramic acid L-alanine ligase (MurC) from Mycobacterium bovis with and without UDP-N-acetylglucosamine.
Acta Crystallogr D Struct Biol, 77, 2021
6KQB
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A long chain secondary alcohol dehydrogenase of Micrococcus luteus
Descriptor: 3-hydroxybutyryl-CoA dehydrogenase
Authors:Kim, H.J, Kim, J.S.
Deposit date:2019-08-16
Release date:2020-08-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.261 Å)
Cite:Cofactor specificity engineering of a long-chain secondary alcohol dehydrogenase from Micrococcus luteus for redox-neutral biotransformation of fatty acids.
Chem.Commun.(Camb.), 55, 2019
6KQ9
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A long chain secondary alcohol dehydrogenase of Micrococcus luteus
Descriptor: 3-hydroxybutyryl-CoA dehydrogenase
Authors:Kim, H.J, Kim, J.S.
Deposit date:2019-08-16
Release date:2020-08-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.251 Å)
Cite:Cofactor specificity engineering of a long-chain secondary alcohol dehydrogenase from Micrococcus luteus for redox-neutral biotransformation of fatty acids.
Chem.Commun.(Camb.), 55, 2019
6KMA
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Crystal structure of SucA with glycolaldehyde-1-13C from Vibrio vulnificus
Descriptor: 2-oxidanylethanal, CALCIUM ION, HEXAETHYLENE GLYCOL, ...
Authors:Seo, P.W, Kim, J.S.
Deposit date:2019-07-31
Release date:2020-08-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.282 Å)
Cite:Understanding the molecular properties of the E1 subunit (SucA) of alpha-ketoglutarate dehydrogenase complex from Vibrio vulnificus for the enantioselective ligation of acetaldehydes into (R)-acetoin.
Catalysis Science And Technology, 2020
6KM9
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Crystal structure of SucA from Vibrio vulnificus
Descriptor: CALCIUM ION, HEXAETHYLENE GLYCOL, MAGNESIUM ION, ...
Authors:Seo, P.W, Kim, J.S.
Deposit date:2019-07-31
Release date:2020-08-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.724 Å)
Cite:Understanding the molecular properties of the E1 subunit (SucA) of alpha-ketoglutarate dehydrogenase complex from Vibrio vulnificus for the enantioselective ligation of acetaldehydes into (R)-acetoin.
Catalysis Science And Technology, 2020
4Z85
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Crystal structur of Pseudomonas fluorescens 2-nitrobenzoate 2-nitroreductase NbaA
Descriptor: 2-nitrobenzoate nitroreductase
Authors:Ha, N.C, Jiao, L, Kim, J.S.
Deposit date:2015-04-08
Release date:2016-01-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Mechanistic Insights into the Pseudomonas fluorescens 2-Nitrobenzoate 2-Nitroreductase NbaA
Appl.Environ.Microbiol., 81, 2015

 

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