4PE5
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![BU of 4pe5 by Molmil](/molmil-images/mine/4pe5) | Crystal Structure of GluN1a/GluN2B NMDA Receptor Ion Channel | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-[(1R,2S)-2-(4-benzylpiperidin-1-yl)-1-hydroxypropyl]phenol, ... | Authors: | Karakas, E, Furukawa, H. | Deposit date: | 2014-04-22 | Release date: | 2014-06-04 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (3.96 Å) | Cite: | Crystal structure of a heterotetrameric NMDA receptor ion channel. Science, 344, 2014
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3JPY
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![BU of 3jpy by Molmil](/molmil-images/mine/3jpy) | Crystal structure of the zinc-bound amino terminal domain of the NMDA receptor subunit NR2B | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Glutamate [NMDA] receptor subunit epsilon-2, ... | Authors: | Karakas, E, Simorowski, N, Furukawa, H. | Deposit date: | 2009-09-04 | Release date: | 2009-12-08 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (3.209 Å) | Cite: | Structure of the zinc-bound amino-terminal domain of the NMDA receptor NR2B subunit. Embo J., 28, 2009
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3JPW
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![BU of 3jpw by Molmil](/molmil-images/mine/3jpw) | Crystal structure of amino terminal domain of the NMDA receptor subunit NR2B | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Glutamate [NMDA] receptor subunit epsilon-2, ... | Authors: | Karakas, E, Simorowski, N, Furukawa, H. | Deposit date: | 2009-09-04 | Release date: | 2009-12-08 | Last modified: | 2021-10-13 | Method: | X-RAY DIFFRACTION (2.803 Å) | Cite: | Structure of the zinc-bound amino-terminal domain of the NMDA receptor NR2B subunit. Embo J., 28, 2009
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3QEK
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![BU of 3qek by Molmil](/molmil-images/mine/3qek) | Crystal structure of amino terminal domain of the NMDA receptor subunit GluN1 | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, NMDA glutamate receptor subunit, POTASSIUM ION, ... | Authors: | Karakas, E, Simorowski, N, Furukawa, H. | Deposit date: | 2011-01-20 | Release date: | 2011-06-15 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (2.001 Å) | Cite: | Subunit arrangement and phenylethanolamine binding in GluN1/GluN2B NMDA receptors. Nature, 475, 2011
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2NRZ
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![BU of 2nrz by Molmil](/molmil-images/mine/2nrz) | |
2NRT
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![BU of 2nrt by Molmil](/molmil-images/mine/2nrt) | |
2NRX
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![BU of 2nrx by Molmil](/molmil-images/mine/2nrx) | Crystal structure of the C-terminal half of UvrC, in the presence of sulfate molecules | Descriptor: | GLYCEROL, SULFATE ION, UvrABC system protein C | Authors: | Karakas, E, Truglio, J.J, Kisker, C. | Deposit date: | 2006-11-02 | Release date: | 2007-02-06 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structure of the C-terminal half of UvrC reveals an RNase H endonuclease domain with an Argonaute-like catalytic triad. Embo J., 26, 2007
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2NRV
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![BU of 2nrv by Molmil](/molmil-images/mine/2nrv) | |
3QEL
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![BU of 3qel by Molmil](/molmil-images/mine/3qel) | Crystal structure of amino terminal domains of the NMDA receptor subunit GluN1 and GluN2B in complex with ifenprodil | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-[(1R,2S)-2-(4-benzylpiperidin-1-yl)-1-hydroxypropyl]phenol, Glutamate [NMDA] receptor subunit epsilon-2, ... | Authors: | Karakas, E, Simorowski, N, Furukawa, H. | Deposit date: | 2011-01-20 | Release date: | 2011-06-15 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Subunit arrangement and phenylethanolamine binding in GluN1/GluN2B NMDA receptors. Nature, 475, 2011
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3QEM
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![BU of 3qem by Molmil](/molmil-images/mine/3qem) | Crystal structure of amino terminal domains of the NMDA receptor subunit GluN1 and GluN2B in complex with Ro 25-6981 | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-[(1R,2S)-3-(4-benzylpiperidin-1-yl)-1-hydroxy-2-methylpropyl]phenol, Glutamate [NMDA] receptor subunit epsilon-2, ... | Authors: | Karakas, E, Simorowski, N, Furukawa, H. | Deposit date: | 2011-01-20 | Release date: | 2011-06-15 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (3.003 Å) | Cite: | Subunit arrangement and phenylethanolamine binding in GluN1/GluN2B NMDA receptors. Nature, 475, 2011
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2NRW
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![BU of 2nrw by Molmil](/molmil-images/mine/2nrw) | |
2NRR
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![BU of 2nrr by Molmil](/molmil-images/mine/2nrr) | |
2A99
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![BU of 2a99 by Molmil](/molmil-images/mine/2a99) | Crystal structure of recombinant chicken sulfite oxidase at resting state | Descriptor: | CHLORIDE ION, GLYCEROL, MOLYBDENUM ATOM, ... | Authors: | Karakas, E, Wilson, H.L, Graf, T.N, Xiang, S, Jaramillo-Busquets, S, Rajagopalan, K.V, Kisker, C. | Deposit date: | 2005-07-11 | Release date: | 2005-08-02 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (2.202 Å) | Cite: | Structural insights into sulfite oxidase deficiency J.Biol.Chem., 280, 2005
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2A9A
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![BU of 2a9a by Molmil](/molmil-images/mine/2a9a) | Crystal structure of recombinant chicken sulfite oxidase with the bound product, sulfate, at the active site | Descriptor: | MOLYBDENUM ATOM, PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER, SULFATE ION, ... | Authors: | Karakas, E, Wilson, H.L, Graf, T.N, Xiang, S, Jaramillo-Busquets, S, Rajagopalan, K.V, Kisker, C. | Deposit date: | 2005-07-11 | Release date: | 2005-08-02 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (2.003 Å) | Cite: | Structural insights into sulfite oxidase deficiency J.Biol.Chem., 280, 2005
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2A9C
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![BU of 2a9c by Molmil](/molmil-images/mine/2a9c) | Crystal structure of R138Q mutant of recombinant chicken sulfite oxidase with the bound product, sulfate, at the active site | Descriptor: | GLYCEROL, MOLYBDENUM ATOM, PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER, ... | Authors: | Karakas, E, Wilson, H.L, Graf, T.N, Xiang, S, Jaramillo-Busquets, S, Rajagopalan, K.V, Kisker, C. | Deposit date: | 2005-07-11 | Release date: | 2005-08-02 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (2.505 Å) | Cite: | Structural insights into sulfite oxidase deficiency J.Biol.Chem., 280, 2005
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2A9D
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![BU of 2a9d by Molmil](/molmil-images/mine/2a9d) | Crystal structure of recombinant chicken sulfite oxidase with Arg at residue 161 | Descriptor: | MOLYBDENUM ATOM, PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER, SULFATE ION, ... | Authors: | Karakas, E, Wilson, H.L, Graf, T.N, Xiang, S, Jaramillo-Busquets, S, Rajagopalan, K.V, Kisker, C. | Deposit date: | 2005-07-11 | Release date: | 2005-08-02 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (1.701 Å) | Cite: | Structural insights into sulfite oxidase deficiency J.Biol.Chem., 280, 2005
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2A9B
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![BU of 2a9b by Molmil](/molmil-images/mine/2a9b) | Crystal structure of R138Q mutant of recombinant sulfite oxidase at resting state | Descriptor: | CHLORIDE ION, MOLYBDENUM ATOM, PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER, ... | Authors: | Karakas, E, Wilson, H.L, Graf, T.N, Xiang, S, Jaramillo-Busquets, S, Rajagopalan, K.V, Kisker, C. | Deposit date: | 2005-07-11 | Release date: | 2005-08-02 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (2.503 Å) | Cite: | Structural insights into sulfite oxidase deficiency J.Biol.Chem., 280, 2005
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7SC0
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![BU of 7sc0 by Molmil](/molmil-images/mine/7sc0) | |
5FXI
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![BU of 5fxi by Molmil](/molmil-images/mine/5fxi) | GluN1b-GluN2B NMDA receptor structure in non-active-2 conformation | Descriptor: | N-METHYL-D-ASPARTATE RECEPTOR GLUN1, N-METHYL-D-ASPARTATE RECEPTOR GLUN2B | Authors: | Tajima, N, Karakas, E, Grant, T, Simorowski, N, Diaz-Avalos, R, Grigorieff, N, Furukawa, H. | Deposit date: | 2016-03-02 | Release date: | 2016-05-11 | Last modified: | 2024-05-08 | Method: | ELECTRON MICROSCOPY (6.4 Å) | Cite: | Activation of Nmda Receptors and the Mechanism of Inhibition by Ifenprodil. Nature, 534, 2016
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5FXK
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![BU of 5fxk by Molmil](/molmil-images/mine/5fxk) | GluN1b-GluN2B NMDA receptor structure-Class Y | Descriptor: | N-METHYL-D-ASPARTATE RECEPTOR GLUN1, N-METHYL-D-ASPARTATE RECEPTOR GLUN2B | Authors: | Tajima, N, Karakas, E, Grant, T, Simorowski, N, Diaz-Avalos, R, Grigorieff, N, Furukawa, H. | Deposit date: | 2016-03-02 | Release date: | 2016-05-11 | Last modified: | 2024-05-08 | Method: | ELECTRON MICROSCOPY (6.4 Å) | Cite: | Activation of Nmda Receptors and the Mechanism of Inhibition by Ifenprodil. Nature, 534, 2016
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5FXG
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![BU of 5fxg by Molmil](/molmil-images/mine/5fxg) | GLUN1B-GLUN2B NMDA RECEPTOR IN ACTIVE CONFORMATION | Descriptor: | N-METHYL-D-ASPARTATE RECEPTOR GLUN1, N-METHYL-D-ASPARTATE RECEPTOR GLUN2B | Authors: | Tajima, N, Karakas, E, Grant, T, Simorowski, N, Diaz-Avalos, R, Grigorieff, N, Furukawa, H. | Deposit date: | 2016-03-02 | Release date: | 2016-05-11 | Last modified: | 2024-05-08 | Method: | ELECTRON MICROSCOPY (6.8 Å) | Cite: | Activation of Nmda Receptors and the Mechanism of Inhibition by Ifenprodil. Nature, 534, 2016
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6UQK
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![BU of 6uqk by Molmil](/molmil-images/mine/6uqk) | Cryo-EM structure of type 3 IP3 receptor revealing presence of a self-binding peptide | Descriptor: | ZINC ION, inositol 1,4,5-triphosphate receptor, type 3 | Authors: | Azumaya, C.M, Linton, E.A, Risener, C.J, Nakagawa, T, Karakas, E. | Deposit date: | 2019-10-20 | Release date: | 2020-01-15 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (3.77 Å) | Cite: | Cryo-EM structure of human type-3 inositol triphosphate receptor reveals the presence of a self-binding peptide that acts as an antagonist. J.Biol.Chem., 295, 2020
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5B3J
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![BU of 5b3j by Molmil](/molmil-images/mine/5b3j) | Activation of NMDA receptors and the mechanism of inhibition by ifenprodil | Descriptor: | Fab, heavy chain, light chain, ... | Authors: | Tajima, N, Karakas, E, Grant, T, Simorowski, N, Diaz-Avalos, R, Grigorieff, N, Furukawa, H. | Deposit date: | 2016-03-01 | Release date: | 2016-05-11 | Last modified: | 2022-03-23 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Activation of NMDA receptors and the mechanism of inhibition by ifenprodil Nature, 534, 2016
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5FXH
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![BU of 5fxh by Molmil](/molmil-images/mine/5fxh) | GluN1b-GluN2B NMDA receptor in non-active-1 conformation | Descriptor: | N-METHYL-D-ASPARTATE RECEPTOR GLUN1, N-METHYL-D-ASPARTATE RECEPTOR GLUN2B | Authors: | Tajima, N, Karakas, E, Grant, T, Simorowski, N, Diaz-Avalos, R, Grigorieff, N, Furukawa, H. | Deposit date: | 2016-03-02 | Release date: | 2016-05-11 | Last modified: | 2024-05-08 | Method: | ELECTRON MICROSCOPY (5 Å) | Cite: | Activation of Nmda Receptors and the Mechanism of Inhibition by Ifenprodil. Nature, 534, 2016
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7T3R
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![BU of 7t3r by Molmil](/molmil-images/mine/7t3r) | IP3 and ATP bound type 3 IP3 receptor in the pre-active C state | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Inositol 1,4,5-trisphosphate receptor type 3, ... | Authors: | Schmitz, E.A, Takahashi, H, Karakas, E. | Deposit date: | 2021-12-08 | Release date: | 2022-03-23 | Last modified: | 2022-05-04 | Method: | ELECTRON MICROSCOPY (3.4 Å) | Cite: | Structural basis for activation and gating of IP 3 receptors. Nat Commun, 13, 2022
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