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PDB: 146 results

7BYQ
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BU of 7byq by Molmil
The mutant variant of PNGM-1. H279A was substituted for alanine to study metal coordination.
Descriptor: Metallo-beta-lactamase PNGM-1, ZINC ION
Authors:Park, Y.S, Kang, L.W, Lee, J.H.
Deposit date:2020-04-24
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020
7BZ1
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BU of 7bz1 by Molmil
The mutant variant of PNGM-1. H96 was substituted for alanine to study metal coordination.
Descriptor: Metallo-beta-lactamase PNGM-1, ZINC ION
Authors:Park, Y.S, Kang, L.W, Lee, J.H.
Deposit date:2020-04-26
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020
7BZI
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BU of 7bzi by Molmil
The mutant variant of PNGM-1. H91 was substituted for alanine to study metal coordination.
Descriptor: Metallo-beta-lactamase PNGM-1, ZINC ION
Authors:Park, Y.S, Kang, L.W, Lee, J.H.
Deposit date:2020-04-28
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020
7BZ3
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BU of 7bz3 by Molmil
The mutant variant of PNGM-1. H257 was substituted for alanine to study substrate binding.
Descriptor: Metallo-beta-lactamase PNGM-1, ZINC ION
Authors:Park, Y.S, Kang, L.W, Lee, J.H.
Deposit date:2020-04-26
Release date:2021-04-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020
4NFW
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BU of 4nfw by Molmil
Structure and atypical hydrolysis mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli
Descriptor: MANGANESE (II) ION, Putative Nudix hydrolase ymfB, SULFATE ION
Authors:Hong, M.K, Kim, J.K, Kang, L.W.
Deposit date:2013-11-01
Release date:2014-05-14
Last modified:2015-03-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Divalent metal ion-based catalytic mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli
Acta Crystallogr.,Sect.D, 70, 2014
3TGX
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BU of 3tgx by Molmil
IL-21:IL21R complex
Descriptor: Interleukin-21, Interleukin-21 receptor, NICKEL (II) ION, ...
Authors:Hamming, O.J, Kang, L, Svenson, A, Karlsen, J.L, Rahbek-Nielsen, H, Paludan, S.R, Hjort, S.A, Bondensgaard, K, Hartmann, R.
Deposit date:2011-08-18
Release date:2012-02-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The crystal structure of the interleukin 21 receptor bound to interleukin 21 reveals that a sugar chain interacting with the WSXWS motif is an integral part of the interleukin 21 receptor.
J.Biol.Chem., 2012
4QF6
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BU of 4qf6 by Molmil
Structure of Aldehyde Dehydrogenase from Bacillus cereus, E194S mutant
Descriptor: Aldehyde dehydrogenase, SODIUM ION
Authors:Ngo, H.P.T, Hong, S.H, Oh, D.K, Kang, L.W.
Deposit date:2014-05-19
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Kinetic Analysis for Cofactor-binding Residues in Mammalian-like Aldehyde Dehydrogenase from Bacillus cereus Involved in Oxidation and Reduction Activity for All-trans-retinal
To be Published
4NFX
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BU of 4nfx by Molmil
Structure and atypical hydrolysis mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli
Descriptor: Putative Nudix hydrolase ymfB
Authors:Hong, M.K, Kim, J.K, Kang, L.W.
Deposit date:2013-11-01
Release date:2014-05-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Divalent metal ion-based catalytic mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli
Acta Crystallogr.,Sect.D, 70, 2014
5I8U
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BU of 5i8u by Molmil
Crystal Structure of the RV1700 (MT ADPRASE) E142Q mutant
Descriptor: ADP-ribose pyrophosphatase, DI(HYDROXYETHYL)ETHER, FORMIC ACID, ...
Authors:Thirawatananond, P, Kang, L.-W, Amzel, L.M, Gabelli, S.B.
Deposit date:2016-02-19
Release date:2016-10-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Kinetic and mutational studies of the adenosine diphosphate ribose hydrolase from Mycobacterium tuberculosis.
J. Bioenerg. Biomembr., 48, 2016
4QET
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BU of 4qet by Molmil
Structure of Aldehyde Dehydrogenase from Bacillus cereus, G224D mutant
Descriptor: Aldehyde dehydrogenase, SODIUM ION
Authors:Ngo, H.P.T, Hong, S.H, Oh, D.K, Kang, L.W.
Deposit date:2014-05-19
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and Kinetic Analysis for Cofactor-binding Residues in Mammalian-like Aldehyde Dehydrogenase from Bacillus cereus Involved in Oxidation and Reduction Activity for All-trans-retinal
To be Published
3DKU
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BU of 3dku by Molmil
Crystal structure of Nudix hydrolase Orf153, ymfB, from Escherichia coli K-1
Descriptor: Putative phosphohydrolase
Authors:Hong, M.K, Kim, J.K, Jung, J.H, Jung, J.W, Choi, J.Y, Kang, L.W.
Deposit date:2008-06-26
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Crystal structure of Nudix hydrolase Orf153, ymfB, from Escherichia coli K-1.
To be Published
3PH4
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BU of 3ph4 by Molmil
Clostridium thermocellum Ribose-5-Phosphate Isomerase B with d-allose
Descriptor: D-ALLOSE, Ribose-5-phosphate isomerase
Authors:Jung, J, Kim, J.-K, Yeom, S.-J, Ahn, Y.-J, Oh, D.-K, Kang, L.-W.
Deposit date:2010-11-03
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of Clostridium thermocellum ribose-5-phosphate isomerase B reveals properties critical for fast enzyme kinetics.
Appl.Microbiol.Biotechnol., 90, 2011
6KFV
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BU of 6kfv by Molmil
GroEL from Xanthomonas oryzae pv. oryzae
Descriptor: 60 kDa chaperonin, GLYCEROL, SULFATE ION
Authors:Tran, H.T, Lee, J.H, Kang, L.W.
Deposit date:2019-07-08
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Crystal Structure of Chaperonin GroEL from Xanthomonas oryzae pv. oryzae
Crystals, 9, 2019
3JRU
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BU of 3jru by Molmil
Crystal structure of Leucyl Aminopeptidase (pepA) from Xoo0834,Xanthomonas oryzae pv. oryzae KACC10331
Descriptor: CALCIUM ION, CARBONATE ION, Probable cytosol aminopeptidase, ...
Authors:Natarajan, S, Huynh, K.-H, Kang, L.W.
Deposit date:2009-09-08
Release date:2010-09-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Leucyl Aminopeptidase (pepA) from Xoo0834,Xanthomonas oryzae pv. oryzae KACC10331
to be published
6K8D
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BU of 6k8d by Molmil
UDP-glucose pyrophosphorylase with UPG from Acinetobacter Baumanii
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, SULFATE ION, ...
Authors:Lee, J.H, Kang, L.W.
Deposit date:2019-06-11
Release date:2020-06-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:UDP-glucose pyrophosphorylase with UPG from Acinetobacter Baumanii
To be published
6LD8
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BU of 6ld8 by Molmil
Crystal structure of cystathionine gamma synthase from Xanthomonas oryzae pv. oryzae in complex with aminoacrylate and cysteine
Descriptor: 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, CYSTEINE, Cystathionine gamma-synthase
Authors:Ngo, H.P.T, Nguyen, T.D.Q, Kang, L.W.
Deposit date:2019-11-20
Release date:2020-11-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal structure of cystathionine gamma synthase from Xanthomonas oryzae pv. oryzae in complex with aminoacrylate and cysteine
To Be Published
6LGO
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BU of 6lgo by Molmil
Crystal structure of cystathionine gamma synthase from Xanthomonas oryzae pv. oryzae in complex with homolanthionine
Descriptor: (2~{S})-2-azanyl-4-[(3~{S})-3-[(~{E})-[2-methyl-3-oxidanyl-5-(phosphonomethyl)pyridin-4-yl]methylideneamino]-4-oxidanyl-4-oxidanylidene-butyl]sulfanyl-butanoic acid, Cystathionine gamma-synthase
Authors:Ngo, H.P.T, Nguyen, T.D.Q, Kang, L.W.
Deposit date:2019-12-05
Release date:2020-12-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Crystal structure of cystathionine gamma synthase from Xanthomonas oryzae pv. oryzae in complex with homolanthionine
To Be Published
6LD9
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BU of 6ld9 by Molmil
Crystal structure of cystathionine gamma synthase from Xanthomonas oryzae pv. oryzae in complex with cystathionine
Descriptor: (2~{S})-4-[(2~{R})-2-azanyl-3-oxidanyl-3-oxidanylidene-propyl]sulfanyl-2-[(~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]butanoic acid, Cystathionine gamma-synthase
Authors:Ngo, H.P.T, Nguyen, T.D.Q, Kang, L.W.
Deposit date:2019-11-20
Release date:2020-11-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of cystathionine gamma synthase from Xanthomonas oryzae pv. oryzae in complex with cystathionine
To Be Published
6LD7
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BU of 6ld7 by Molmil
Native Structure of cystathionine gamma synthase (XometB) from Xanthomonas oryzae pv. oryzae
Descriptor: Cystathionine gamma-synthase, DI(HYDROXYETHYL)ETHER, TRIETHYLENE GLYCOL
Authors:Ngo, H.P.T, Nguyen, T.D.Q, Kang, L.W.
Deposit date:2019-11-20
Release date:2020-11-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Native Structure of cystathionine gamma synthase (XometB) from Xanthomonas oryzae pv. oryzae
To Be Published
4IY7
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BU of 4iy7 by Molmil
crystal structure of cystathionine gamma lyase (XometC) from Xanthomonas oryzae pv. oryzae in complex with E-site serine, A-site external aldimine structure with serine and A-site external aldimine structure with aminoacrylate intermediates
Descriptor: (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-serine, 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, Cystathionine gamma-lyase-like protein, ...
Authors:Ngo, H.P.T, Kim, J.K, Kang, L.W.
Deposit date:2013-01-28
Release date:2014-01-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:PLP undergoes conformational changes during the course of an enzymatic reaction.
Acta Crystallogr.,Sect.D, 70, 2014
4NT8
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BU of 4nt8 by Molmil
Formyl-methionine-alanine complex structure of peptide deformylase from Xanthomoonas oryzae pv. oryzae
Descriptor: ACETATE ION, ALANINE, CADMIUM ION, ...
Authors:Ngo, H.P.T, Kim, J.K, Kang, L.W.
Deposit date:2013-12-02
Release date:2014-12-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate complex structure of Xoo1075, a peptide deformylase, from Xanthomonas oryzae pv. oryzae
To be Published
4QD4
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BU of 4qd4 by Molmil
Structure of ADC-68, a Novel Carbapenem-Hydrolyzing Class C Extended-Spectrum -Lactamase from Acinetobacter baumannii
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-lactamase ADC-68, CITRIC ACID
Authors:Hong, M.K, Kang, L.W.
Deposit date:2014-05-13
Release date:2015-01-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of ADC-68, a novel carbapenem-hydrolyzing class C extended-spectrum beta-lactamase isolated from Acinetobacter baumannii
Acta Crystallogr.,Sect.D, 70, 2014
4REJ
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BU of 4rej by Molmil
Crystal structure of ginseng major latex-like protein 151 (GLP) from Panax ginseng. (crystal-3)
Descriptor: Major latex-like protein
Authors:Hong, M.K, Kang, L.W.
Deposit date:2014-09-23
Release date:2015-05-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structure of ginseng major latex-like protein 151 and its proposed lysophosphatidic acid-binding mechanism.
Acta Crystallogr.,Sect.D, 71, 2015
4REI
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BU of 4rei by Molmil
Crystal structure of ginseng major latex-like protein 151 (GLP) from Panax ginseng. (crystal-2)
Descriptor: (3R,5R)-3-ethyl-2,5-dimethylheptane, Major latex-like protein
Authors:Hong, M.K, Kang, L.W.
Deposit date:2014-09-23
Release date:2015-05-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structure of ginseng major latex-like protein 151 and its proposed lysophosphatidic acid-binding mechanism.
Acta Crystallogr.,Sect.D, 71, 2015
4REH
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BU of 4reh by Molmil
Crystal structure of ginseng major latex-like protein 151 (GLP) from Panax ginseng. (crystal-1)
Descriptor: Major latex-like protein
Authors:Hong, M.K, Kang, L.W.
Deposit date:2014-09-23
Release date:2015-05-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of ginseng major latex-like protein 151 and its proposed lysophosphatidic acid-binding mechanism.
Acta Crystallogr.,Sect.D, 71, 2015

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PDB entries from 2024-05-15

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