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PDB: 91 results

1M1C
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BU of 1m1c by Molmil
Structure of the L-A virus
Descriptor: Major coat protein
Authors:Naitow, H, Tang, J, Canady, M, Wickner, R.B, Johnson, J.E.
Deposit date:2002-06-18
Release date:2002-10-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:L-A virus at 3.4 A resolution reveals particle architecture and mRNA decapping mechanism.
Nat.Struct.Biol., 9, 2002
7KW7
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BU of 7kw7 by Molmil
Atomic cryoEM structure of Hsp90-Hsp70-Hop-GR
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Glucocorticoid receptor, Heat shock 70 kDa protein 1A, ...
Authors:Wang, R.Y, Noddings, C.M, Kirschke, E, Myasnikov, A, Johnson, J.L, Agard, D.A.
Deposit date:2020-11-30
Release date:2021-12-08
Last modified:2022-02-02
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:Structure of Hsp90-Hsp70-Hop-GR reveals the Hsp90 client-loading mechanism.
Nature, 601, 2022
4FRN
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BU of 4frn by Molmil
Crystal structure of the cobalamin riboswitch regulatory element
Descriptor: BARIUM ION, Cobalamin riboswitch aptamer domain, Hydroxocobalamin
Authors:Reyes, F.E, Johnson, J.E, Polaski, J.T, Batey, R.T.
Deposit date:2012-06-26
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.43 Å)
Cite:B12 cofactors directly stabilize an mRNA regulatory switch.
Nature, 492, 2012
4FRG
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BU of 4frg by Molmil
Crystal structure of the cobalamin riboswitch aptamer domain
Descriptor: Hydroxocobalamin, IRIDIUM (III) ION, MAGNESIUM ION, ...
Authors:Reyes, F.E, Johnson, J.E, Polaski, J.T, Batey, R.T.
Deposit date:2012-06-26
Release date:2012-10-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:B12 cofactors directly stabilize an mRNA regulatory switch.
Nature, 492, 2012
4FSJ
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BU of 4fsj by Molmil
Crystal structure of the virus like particle of Flock House virus
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Speir, J.A, Chen, Z, Reddy, V.S, Johnson, J.E.
Deposit date:2012-06-27
Release date:2012-08-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural study of virus assembly intermediates reveals maturation event sequence and a staging position for externalized lytic peptides
to be published, 2012
4FTS
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BU of 4fts by Molmil
Crystal structure of the N363T mutant of the Flock House virus capsid
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Speir, J.A, Chen, Z, Reddy, V.S, Johnson, J.E.
Deposit date:2012-06-28
Release date:2012-08-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural study of virus assembly intermediates reveals maturation event sequence and a staging position for externalized lytic peptides
to be published, 2012
4FTE
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BU of 4fte by Molmil
Crystal structure of the D75N mutant capsid of Flock House virus
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Speir, J.A, Chen, Z, Reddy, V.S, Johnson, J.E.
Deposit date:2012-06-27
Release date:2012-08-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural study of virus assembly intermediates reveals maturation event sequence and a staging position for externalized lytic peptides
to be published, 2012
4FTB
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BU of 4ftb by Molmil
Crystal structure of the authentic Flock House virus particle
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Speir, J.A, Chen, Z, Reddy, V.S, Johnson, J.E.
Deposit date:2012-06-27
Release date:2012-08-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural study of virus assembly intermediates reveals maturation event sequence and a staging position for externalized lytic peptides
to be published, 2012
1IF0
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BU of 1if0 by Molmil
PSEUDO-ATOMIC MODEL OF BACTERIOPHAGE HK97 PROCAPSID (PROHEAD II)
Descriptor: PROTEIN (MAJOR CAPSID PROTEIN GP5)
Authors:Conway, J.F, Wikoff, W.R, Cheng, N, Duda, R.L, Hendrix, R.W, Johnson, J.E, Steven, A.C.
Deposit date:2001-04-11
Release date:2001-05-02
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Virus maturation involving large subunit rotations and local refolding.
Science, 292, 2001
1NY7
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BU of 1ny7 by Molmil
COWPEA MOSAIC VIRUS (CPMV)
Descriptor: COWPEA MOSAIC VIRUS, LARGE (L) SUBUNIT, SMALL (S) SUBUNIT
Authors:Lin, T, Chen, Z, Usha, R, Stauffacher, C.V, Dai, J.-B, Schmidt, T, Johnson, J.E.
Deposit date:2003-02-11
Release date:2003-03-18
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Refined Crystal Structure of Cowpea Mosaic Virus at 2.8A Resolution
Virology, 265, 1999
1RNA
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BU of 1rna by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF AN RNA HELIX: [U(U-A)6A]2
Descriptor: RNA (5'-R(*UP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*A)-3')
Authors:Dock-Bregeon, A.C, Chevrier, B, Podjarny, A, Johnson, J, De Bear, J.S, Gough, G.R, Gilham, P.T, Moras, D.
Deposit date:1990-02-01
Release date:1991-04-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystallographic structure of an RNA helix: [U(UA)6A]2.
J.Mol.Biol., 209, 1989
4GMA
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BU of 4gma by Molmil
Crystal structure of the adenosylcobalamin riboswitch
Descriptor: Adenosylcobalamin, Adenosylcobalamin riboswitch
Authors:Reyes, F.E, Johnson, J.E, Polaski, J.T, Batey, R.T.
Deposit date:2012-08-15
Release date:2012-10-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.94 Å)
Cite:B12 cofactors directly stabilize an mRNA regulatory switch.
Nature, 492, 2012
1PEH
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BU of 1peh by Molmil
NMR STRUCTURE OF THE MEMBRANE-BINDING DOMAIN OF CTP PHOSPHOCHOLINE CYTIDYLYLTRANSFERASE, 10 STRUCTURES
Descriptor: PEPNH1
Authors:Dunne, S.J, Cornell, R.B, Johnson, J.E, Glover, N.R, Tracey, A.S.
Deposit date:1996-06-10
Release date:1996-12-07
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:Structure of the membrane binding domain of CTP:phosphocholine cytidylyltransferase.
Biochemistry, 35, 1996
1PGL
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BU of 1pgl by Molmil
BEAN POD MOTTLE VIRUS (BPMV), MIDDLE COMPONENT
Descriptor: 5'-R(*AP*GP*UP*CP*UP*C)-3', BEAN POD MOTTLE VIRUS LARGE (L) SUBUNIT, BEAN POD MOTTLE VIRUS SMALL (S) SUBUNIT
Authors:Lin, T, Cavarelli, J, Johnson, J.E.
Deposit date:2003-05-28
Release date:2003-11-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Evidence for assembly-dependent folding of protein and RNA in an icosahedral virus.
Virology, 314, 2003
1PGW
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BU of 1pgw by Molmil
BEAN POD MOTTLE VIRUS (BPMV), TOP COMPONENT
Descriptor: BEAN POD MOTTLE VIRUS LARGE (L) SUBUNIT, BEAN POD MOTTLE VIRUS SMALL (S) SUBUNIT
Authors:Lin, T, Cavarelli, J, Johnson, J.E.
Deposit date:2003-05-28
Release date:2003-11-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Evidence for assembly-dependent folding of protein and RNA in an icosahedral virus.
Virology, 314, 2003
1PEI
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BU of 1pei by Molmil
NMR STRUCTURE OF THE MEMBRANE-BINDING DOMAIN OF CTP PHOSPHOCHOLINE CYTIDYLYLTRANSFERASE, 10 STRUCTURES
Descriptor: PEPC22
Authors:Dunne, S.J, Cornell, R.B, Johnson, J.E, Glover, N.R, Tracey, A.S.
Deposit date:1996-06-10
Release date:1996-12-07
Last modified:2018-03-14
Method:SOLUTION NMR
Cite:Structure of the membrane binding domain of CTP:phosphocholine cytidylyltransferase.
Biochemistry, 35, 1996
1BMV
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BU of 1bmv by Molmil
PROTEIN-RNA INTERACTIONS IN AN ICOSAHEDRAL VIRUS AT 3.0 ANGSTROMS RESOLUTION
Descriptor: PROTEIN (ICOSAHEDRAL VIRUS - A DOMAIN), PROTEIN (ICOSAHEDRAL VIRUS - B AND C DOMAIN), RNA (5'-R(*GP*GP*UP*CP*AP*AP*AP*AP*UP*GP*C)-3')
Authors:Chen, Z, Stauffacher, C, Li, Y, Schmidt, T, Bomu, W, Kamer, G, Shanks, M, Lomonossoff, G, Johnson, J.E.
Deposit date:1989-10-09
Release date:1989-10-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Protein-RNA interactions in an icosahedral virus at 3.0 A resolution.
Science, 245, 1989
4AXP
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BU of 4axp by Molmil
NMR structure of Hsp12, a protein induced by and required for dietary restriction-induced lifespan extension in yeast.
Descriptor: 12 KDA HEAT SHOCK PROTEIN
Authors:Herbert, A.P, Riesen, M, Bloxam, L, Kosmidou, E, Wareing, B.M, Johnson, J.R, Phelan, M.M, Pennington, S.R, Lian, L.Y, Morgan, A.
Deposit date:2012-06-13
Release date:2012-08-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure of Hsp12, a Protein Induced by and Required for Dietary Restriction-Induced Lifespan Extension in Yeast.
Plos One, 7, 2012
7K3M
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BU of 7k3m by Molmil
Crystal Structure of the Beta Lactamase Class D from Chitinophaga pinensis by Serial Crystallography
Descriptor: Beta-lactamase
Authors:Kim, Y, Sherrell, D.A, Johnson, J, Lavens, A, Maltseva, N, Endres, M, Babnigg, G, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-09-11
Release date:2020-09-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the Beta Lactamase Class D from Chitinophaga pinensis by Serial Crystallography
To Be Published
1ZA7
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BU of 1za7 by Molmil
The crystal structure of salt stable cowpea cholorotic mottle virus at 2.7 angstroms resolution.
Descriptor: Coat protein
Authors:Bothner, B, Speir, J.A, Qu, C, Willits, D.A, Young, M.J, Johnson, J.E.
Deposit date:2005-04-05
Release date:2006-03-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Enhanced local symmetry interactions globally stabilize a mutant virus capsid that maintains infectivity and capsid dynamics.
J.Virol., 80, 2006
2BBV
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BU of 2bbv by Molmil
THE REFINED THREE-DIMENSIONAL STRUCTURE OF AN INSECT VIRUS AT 2.8 ANGSTROMS RESOLUTION
Descriptor: CALCIUM ION, PROTEIN (BLACK BEETLE VIRUS CAPSID PROTEIN), RNA (5'-R(*UP*CP*UP*UP*AP*UP*AP*UP*CP*U)-3')
Authors:Wery, J.-P, Reddy, V.S, Hosur, M.V, Johnson, J.E.
Deposit date:1994-06-06
Release date:1994-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The refined three-dimensional structure of an insect virus at 2.8 A resolution.
J.Mol.Biol., 235, 1994
3DDX
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BU of 3ddx by Molmil
HK97 bacteriophage capsid Expansion Intermediate-II model
Descriptor: Major capsid protein
Authors:Lee, K.K, Gan, L, Conway, J.F, Hendrix, R.W, Steven, A.C, Johnson, J.E.
Deposit date:2008-06-06
Release date:2008-11-04
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY
Cite:Virus capsid expansion driven by the capture of mobile surface loops.
Structure, 16, 2008
2XNY
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BU of 2xny by Molmil
A fragment of streptococcal M1 protein in complex with human fibrinogen
Descriptor: FIBRINOGEN ALPHA CHAIN, FIBRINOGEN BETA CHAIN, FIBRINOGEN GAMMA CHAIN, ...
Authors:Macheboeuf, P, Y Fu, C, Zinkernagel, A.S, Johnson, J.E, Nizet, V, Ghosh, P.
Deposit date:2010-08-06
Release date:2011-04-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (7.5 Å)
Cite:Streptococcal M1 Protein Constructs a Pathological Host Fibrinogen Network
Nature, 472, 2011
1MJ4
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BU of 1mj4 by Molmil
Crystal Structure Analysis of the cytochrome b5 domain of human sulfite oxidase
Descriptor: GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
Authors:Rudolph, M.J, Johnson, J.L, Rajagopalan, K.V, Kisker, C.
Deposit date:2002-08-26
Release date:2002-09-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The 1.2 A structure of the human sulfite oxidase cytochrome b(5) domain.
Acta Crystallogr.,Sect.D, 59, 2003
7RWP
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BU of 7rwp by Molmil
Crystal Structure of BPTF bromodomain in complex with 5-[4-(aminomethyl)anilino]-4-chloro-2-methylpyridazin-3(2H)-one
Descriptor: 5-[4-(aminomethyl)anilino]-4-chloro-2-methylpyridazin-3(2H)-one, CALCIUM ION, Nucleosome-remodeling factor subunit BPTF
Authors:Zahid, H, Buchholz, C, Johnson, J.A, Shi, K, Aihara, H, Pomerantz, W.C.K.
Deposit date:2021-08-20
Release date:2022-08-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:New Design Rules for Developing Potent Cell-Active Inhibitors of the Nucleosome Remodeling Factor (NURF) via BPTF Bromodomain Inhibition.
J.Med.Chem., 64, 2021

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