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PDB: 23 results

8F7C
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BU of 8f7c by Molmil
Cryo-EM structure of human pannexin 2
Descriptor: Pannexin-2, Soluble cytochrome b562 fusion
Authors:He, Z, Yuan, P.
Deposit date:2022-11-18
Release date:2023-04-05
Method:ELECTRON MICROSCOPY (3.92 Å)
Cite:Structural and functional analysis of human pannexin 2 channel.
Nat Commun, 14, 2023
7DAV
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BU of 7dav by Molmil
The native crystal structure of COVID-19 main protease
Descriptor: COVID-19 MAIN PROTEASE
Authors:He, Z.S, He, B, Cao, P, Jiang, H.D, Gong, Y, Gao, X.Y.
Deposit date:2020-10-18
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:A comparison of Remdesivir versus gold cluster in COVID-19 animal model: A better therapeutic outcome of gold cluster.
Nano Today, 44, 2022
7DAU
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BU of 7dau by Molmil
The crystal structure of COVID-19 main protease treated by GA
Descriptor: COVID-19 MAIN PROTEASE, GOLD ION
Authors:He, Z.S, He, B, Cao, P, Jiang, H.D, Gong, Y, Gao, X.Y.
Deposit date:2020-10-18
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:A comparison of Remdesivir versus gold cluster in COVID-19 animal model: A better therapeutic outcome of gold cluster.
Nano Today, 44, 2022
7DAT
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BU of 7dat by Molmil
The crystal structure of COVID-19 main protease treated by AF
Descriptor: COVID-19 MAIN PROTEASE, GOLD ION
Authors:He, Z.S, He, B, Cao, P, Jiang, H.D, Gong, Y, Gao, X.Y.
Deposit date:2020-10-18
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A comparison of Remdesivir versus gold cluster in COVID-19 animal model: A better therapeutic outcome of gold cluster.
Nano Today, 44, 2022
5D1I
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BU of 5d1i by Molmil
Structure of Cyclic nucleotide-binding-like protein from Brucella abortus bv. 1 str. 9-941
Descriptor: Cyclic nucleotide-binding protein
Authors:He, Z, Dong, J, Li, X, Gao, Y.
Deposit date:2015-08-04
Release date:2015-09-09
Last modified:2016-01-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of cyclic nucleotide-binding-like protein from Brucella abortus
Biochem.Biophys.Res.Commun., 468, 2015
7X1R
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BU of 7x1r by Molmil
Cryo-EM structure of human thioredoxin reductase bound by Au
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GOLD ION, Thioredoxin reductase 1, ...
Authors:He, Z.S, Cao, P, Cao, S.H, He, B, Jiang, H.D, Gong, Y, Gao, X.Y.
Deposit date:2022-02-24
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Au4 cluster inhibits human thioredoxin reductase activity via specifically binding of Au to Cys189
Nano Today, 47, 2022
7Y1P
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BU of 7y1p by Molmil
CRYSTAL STRUCTURE OF THE RGS-HOMOLOGOUS DOMAIN OF AXIN IN COMPLEX WITH LZ-22Na
Descriptor: (2~{Z},4~{Z})-2-methyl-5-(8-oxidanyldibenzofuran-4-yl)penta-2,4-dienal, Axin-1
Authors:He, Z, Yuchi, Z.
Deposit date:2022-06-08
Release date:2023-12-13
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:CRYSTAL STRUCTURE OF THE RGS-HOMOLOGOUS DOMAIN OF AXIN IN COMPLEX WITH LZ-22Na
To Be Published
8WG5
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BU of 8wg5 by Molmil
Cryo-EM structure of USP16 bound to H2AK119Ub nucleosome
Descriptor: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Ai, H.S, He, Z.Z, Deng, Z.H, Liu, L.
Deposit date:2023-09-20
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Cryo-EM structure of USP16 bound to H2AK119Ub nucleosome
To Be Published
8Y4U
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BU of 8y4u by Molmil
Crystal structure of a His1 from oryza sativa
Descriptor: FE (III) ION, Fe(II)/2-oxoglutarate-dependent oxygenase
Authors:Wang, N, Ma, J.M, Shibing, H, Beibei, Y, He, Z, Dandan, L.
Deposit date:2024-01-30
Release date:2024-02-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of HPPD inhibitor sensitive protein from Oryza sativa.
Biochem.Biophys.Res.Commun., 704, 2024
1OZN
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BU of 1ozn by Molmil
1.5A Crystal Structure of the Nogo Receptor Ligand Binding Domain Reveals a Convergent Recognition Scaffold Mediating Inhibition of Myelination
Descriptor: ACETIC ACID, Reticulon 4 receptor, alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:He, X, Bazan, J.F, Park, J.B, McDermott, G, He, Z, Garcia, K.C.
Deposit date:2003-04-09
Release date:2003-05-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structure of the Nogo Receptor Ectodomain. A Recognition module implicated in Myelin Inhibition.
Neuron, 38, 2003
6UZY
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BU of 6uzy by Molmil
Cryo-EM structure of Xenopus tropicalis pannexin 1
Descriptor: HEXADECANE, Pannexin, [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate
Authors:Deng, Z, He, Z, Yuan, P.
Deposit date:2019-11-15
Release date:2020-04-01
Last modified:2020-04-22
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Cryo-EM structures of the ATP release channel pannexin 1.
Nat.Struct.Mol.Biol., 27, 2020
6V6D
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BU of 6v6d by Molmil
Cryo-EM structure of human pannexin 1
Descriptor: Pannexin-1
Authors:Deng, Z, He, Z, Yuan, P.
Deposit date:2019-12-05
Release date:2020-04-01
Last modified:2020-04-22
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:Cryo-EM structures of the ATP release channel pannexin 1.
Nat.Struct.Mol.Biol., 27, 2020
8IUF
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BU of 8iuf by Molmil
Cryo-EM structure of Euglena gracilis super-complex I+III2+IV, composite
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Wu, M.C, Tian, H.T, He, Z.X, Hu, Y.Q, Zhou, L.
Deposit date:2023-03-24
Release date:2024-02-28
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Euglena's atypical respiratory chain adapts to the discoidal cristae and flexible metabolism.
Nat Commun, 15, 2024
6BNB
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BU of 6bnb by Molmil
Crystal structure of DDB1-CRBN-BRD4(BD1) complex bound to dBET57 PROTAC
Descriptor: Bromodomain-containing protein 4, DNA damage-binding protein 1, Protein cereblon, ...
Authors:Nowak, R.P, DeAngelo, S.L, Buckley, D, Ishoey, M, He, Z, Zhang, T, Bradner, J.E, Fischer, E.S.
Deposit date:2017-11-16
Release date:2018-05-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (6.343 Å)
Cite:Plasticity in binding confers selectivity in ligand-induced protein degradation.
Nat. Chem. Biol., 14, 2018
8J9H
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BU of 8j9h by Molmil
Cryo-EM structure of Euglena gracilis respiratory complex I, deactive state
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
Authors:Wu, M.C, He, Z.X, Tian, H.T, Hu, Y.Q, Han, F.Z, Zhou, L.
Deposit date:2023-05-03
Release date:2024-02-28
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Euglena's atypical respiratory chain adapts to the discoidal cristae and flexible metabolism.
Nat Commun, 15, 2024
8J9I
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BU of 8j9i by Molmil
Cryo-EM structure of Euglena gracilis complex I, turnover state
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ...
Authors:Wu, M.C, He, Z.X, Tian, H.T, Hu, Y.Q, Han, F.Z, Zhou, L.
Deposit date:2023-05-03
Release date:2024-02-28
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Euglena's atypical respiratory chain adapts to the discoidal cristae and flexible metabolism.
Nat Commun, 15, 2024
8J9J
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BU of 8j9j by Molmil
Cryo-EM structure of Euglena gracilis complex I, NADH state
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ...
Authors:Wu, M.C, He, Z.X, Tian, H.T, Hu, Y.Q, Han, F.Z, Zhou, L.
Deposit date:2023-05-03
Release date:2024-02-28
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Euglena's atypical respiratory chain adapts to the discoidal cristae and flexible metabolism.
Nat Commun, 15, 2024
4JKZ
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BU of 4jkz by Molmil
Crystal structure of ms6564 from mycobacterium smegmatis
Descriptor: Transcriptional regulator, TetR family
Authors:Yang, S.F, Gao, Z.Q, He, Z.G, Dong, Y.H.
Deposit date:2013-03-12
Release date:2013-06-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for interaction between Mycobacterium smegmatis Ms6564, a TetR family master regulator, and its target DNA.
J.Biol.Chem., 288, 2013
8IUJ
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BU of 8iuj by Molmil
Cryo-EM structure of Euglena gracilis super-complex III2+IV2, composite
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Wu, M.C, Tian, H.T, He, Z.X, Hu, Y.Q, Zhou, L.
Deposit date:2023-03-24
Release date:2024-02-28
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Euglena's atypical respiratory chain adapts to the discoidal cristae and flexible metabolism.
Nat Commun, 15, 2024
4JL3
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BU of 4jl3 by Molmil
Crystal structure of ms6564-dna complex
Descriptor: DNA (31-MER), Transcriptional regulator, TetR family
Authors:Yang, S.F, Gao, Z.Q, He, Z.G, Dong, Y.H.
Deposit date:2013-03-12
Release date:2013-06-26
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for interaction between Mycobacterium smegmatis Ms6564, a TetR family master regulator, and its target DNA.
J.Biol.Chem., 288, 2013
7EG6
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BU of 7eg6 by Molmil
Snf5 Finger Helix bound to the nucleosome
Descriptor: DNA (235-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Chen, Z.C, Chen, K.J, He, Z.Y, Ye, Y.P.
Deposit date:2021-03-24
Release date:2022-01-12
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of the SWI/SNF complex bound to the nucleosome and insights into the functional modularity.
Cell Discov, 7, 2021
7EGP
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BU of 7egp by Molmil
The structure of SWI/SNF-nucleosome complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-like protein ARP9, Actin-related protein 7, ...
Authors:Chen, Z.C, Chen, K.J, He, Z.Y, Ye, Y.P.
Deposit date:2021-03-24
Release date:2022-01-12
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Structure of the SWI/SNF complex bound to the nucleosome and insights into the functional modularity.
Cell Discov, 7, 2021
7EGM
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BU of 7egm by Molmil
The SRM module of SWI/SNF-nucleosome complex
Descriptor: SWI/SNF chromatin-remodeling complex subunit SNF5, SWI/SNF chromatin-remodeling complex subunit SWI1, SWI/SNF complex subunit SWI3, ...
Authors:Chen, Z.C, Chen, K.J, He, Z.Y, Ye, Y.P.
Deposit date:2021-03-24
Release date:2022-01-12
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of the SWI/SNF complex bound to the nucleosome and insights into the functional modularity.
Cell Discov, 7, 2021

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PDB entries from 2024-06-12

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